CK739918

Overview
NameCK739918
Unique NameCK739918
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length553
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK739918 vs. ExPASy Swiss-Prot
Match: BXL7_ARATH (Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2)

HSP 1 Score: 141.354 bits (355), Expect = 9.315e-46
Identity = 75/156 (48.08%), Postives = 98/156 (62.82%), Query Frame = 1
Query:   91 PMTWYPQDYIKVPMTDMKMRPQATSGNPGRTYRFYEGKEVFPFGCGLXXXXXXXXXXXXXQNKLYLNQSSSTKMVENQDVVHYKSVPELGTEFCETRKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNG--RPIKQLVGFQSVILNAKEKAEIGFE 552
            P+TWYPQ ++ + MTDM+MR  + +G PGRTY+FY+G +V+ FG GL             +  LYLNQS   K   N D V Y  V E+G E C+  K  VT+ V+N GEMAGKHPVL+F +  R G    R  KQLVGF+S++L+  EKAE+ FE
Sbjct:  579 PVTWYPQSFVNIQMTDMRMR--SATGYPGRTYKFYKGPKVYEFGHGLSYSAYSYRFKTLAETNLYLNQS---KAQTNSDSVRYTLVSEMGKEGCDVAKTKVTVEVENQGEMAGKHPVLMFARHERGGEDGKRAEKQLVGFKSIVLSNGEKAEMEFE 729          

HSP 2 Score: 62.7734 bits (151), Expect = 9.315e-46
Identity = 24/30 (80.00%), Postives = 29/30 (96.67%), Query Frame = 3
Query:    3 ILWAGYPGEAGAVALAEVIFGDHNPGGRLP 92
            I+WAGYPGEAG +A++E+IFGDHNPGGRLP
Sbjct:  550 IIWAGYPGEAGGIAISEIIFGDHNPGGRLP 579          
BLAST of CK739918 vs. ExPASy Swiss-Prot
Match: BXL5_ARATH (Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 2.382e-33
Identity = 66/172 (38.37%), Postives = 89/172 (51.74%), Query Frame = 1
Query:   91 PMTWYPQDYI-KVPMTDMKMRPQATSGNPGRTYRFYEGKEVFPFGCGLXXXXXXXXXXXXXQNKLYLNQSSSTKMVENQDVVHYKSVP----------ELGTEFCETRKFLVTIGVKNHGEMAGKHPVLLFVKPAR-----RGNGRPIKQLVGFQSVIL--NAKEKAEIGFE 552
            P TWYPQ++  KV MTDM MRP +TSG PGR+YRFY GK ++ FG GL                     S ST ++    ++H K+ P          ++ T  C   K  + IGVKNHG  +G H VL+F KP +      G G P+ QLVGF+ V +  +  EK  + F+
Sbjct:  579 PETWYPQEFADKVAMTDMNMRPNSTSGFPGRSYRFYTGKPIYKFGYGLSY------------------SSFSTFVLSAPSIIHIKTNPIMNLNKTTSVDISTVNCHDLKIRIVIGVKNHGLRSGSHVVLVFWKPPKCSKSLVGGGVPLTQLVGFERVEVGRSMTEKFTVDFD 732          

HSP 2 Score: 55.8398 bits (133), Expect = 2.382e-33
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 3
Query:    3 ILWAGYPGEAGAVALAEVIFGDHNPGGRLPD 95
            +LW GYPGEAG  A+A+VIFGD+NP GRLP+
Sbjct:  550 VLWVGYPGEAGGDAIAQVIFGDYNPSGRLPE 580          
BLAST of CK739918 vs. ExPASy Swiss-Prot
Match: BXL3_ARATH (Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 9.188e-29
Identity = 59/159 (37.11%), Postives = 86/159 (54.09%), Query Frame = 1
Query:   91 PMTWYPQDYI-KVPMTDMKMRPQATSGNPGRTYRFYEGKEVFPFGCGLXXXXXXXXXXXXXQ-NKLYLNQSSSTKMVENQDV----VHYKSVPELGTEFCETRKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIGF 549
            PMTWYPQ Y+ KVPM++M MRP  + G PGR+YRFY G+ V+ F   L             +   L L+++   +  E Q +     H ++  E G++      F V + VKN G+ AG H V LF   + + +G PIKQL+GF+ + L   E+A + F
Sbjct:  583 PMTWYPQSYVEKVPMSNMNMRPDKSKGYPGRSYRFYTGETVYAFADALTYTKFDHQLIKAPRLVSLSLDENHPCRSSECQSLDAIGPHCENAVEGGSD------FEVHLNVKNTGDRAGSHTVFLFT-TSPQVHGSPIKQLLGFEKIRLGKSEEAVVRF 734          

HSP 2 Score: 53.5286 bits (127), Expect = 9.188e-29
Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 3
Query:    3 ILWAGYPGEAGAVALAEVIFGDHNPGGRLP 92
            I+W GYPGEAG +A+A+VIFG HNP G LP
Sbjct:  554 IMWVGYPGEAGGLAIADVIFGRHNPSGNLP 583          
BLAST of CK739918 vs. ExPASy Swiss-Prot
Match: BXL4_ARATH (Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.435e-28
Identity = 64/162 (39.51%), Postives = 81/162 (50.00%), Query Frame = 1
Query:   91 PMTWYPQDYI-KVPMTDMKMRPQATSGNPGRTYRFYEGKEVFPFGCGLXXXXXXXXXXXXXQ-NKLYLNQSSSTKMVENQDVVHYKSVPELGTEFCET------RKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIGFE 552
            PMTWYPQ Y+ KVPMT M MRP   SG PGRTYRFY G+ V+ FG GL                 L L ++   +  E Q      S+  +G   CE         F V I V+N G+  G H V LF  P    +G P K LVGF+ + L  +E+A + F+
Sbjct:  593 PMTWYPQSYVEKVPMTIMNMRPDKASGYPGRTYRFYTGETVYAFGDGLSYTKFSHTLVKAPSLVSLGLEENHVCRSSECQ------SLDAIGPH-CENAVSGGGSAFEVHIKVRNGGDREGIHTVFLFTTPPAI-HGSPRKHLVGFEKIRLGKREEAVVRFK 746          

HSP 2 Score: 53.1434 bits (126), Expect = 3.435e-28
Identity = 20/30 (66.67%), Postives = 26/30 (86.67%), Query Frame = 3
Query:    3 ILWAGYPGEAGAVALAEVIFGDHNPGGRLP 92
            ILW GYPGEAG +A+A++IFG +NP G+LP
Sbjct:  564 ILWVGYPGEAGGIAIADIIFGRYNPSGKLP 593          
BLAST of CK739918 vs. ExPASy Swiss-Prot
Match: BXL1_ARATH (Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.582e-24
Identity = 61/157 (38.85%), Postives = 77/157 (49.04%), Query Frame = 1
Query:   91 PMTWYPQDYI-KVPMTDMKMRPQATSGN-PGRTYRFYEGKEVFPFGCGL--XXXXXXXXXXXXXQNKLYLNQSSSTKMVENQDVVHYKSVPELGTEFCETRKFLVTIGVKNHGEMAGKHPVLLFVKPARRG-NGRPI-KQLVGFQSVILNAKEKAEI 543
            PMTWYPQDY+ KVPMT M MR    SGN PGRTYRFY+G  VFPFG GL               Q  + L+  +S   + N       S+    T      K  + + V N GE  G H V +F +P   G  G  + KQL+ F+ V + A  K  +
Sbjct:  581 PMTWYPQDYVAKVPMTVMAMR---ASGNYPGRTYRFYKGPVVFPFGFGLSYTTFTHSLAKSPLAQLSVSLSNLNSANTILNSS---SHSIKVSHTNCNSFPKMPLHVEVSNTGEFDGTHTVFVFAEPPINGIKGLGVNKQLIAFEKVHVMAGAKQTV 731          

HSP 2 Score: 51.6026 bits (122), Expect = 1.582e-24
Identity = 20/30 (66.67%), Postives = 25/30 (83.33%), Query Frame = 3
Query:    3 ILWAGYPGEAGAVALAEVIFGDHNPGGRLP 92
            I+WAGYPG+AG  A+A +IFG  NPGG+LP
Sbjct:  552 IIWAGYPGQAGGAAIANIIFGAANPGGKLP 581          
BLAST of CK739918 vs. ExPASy Swiss-Prot
Match: XYNB_PRUPE (Putative beta-D-xylosidase (Fragment) OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.077e-24
Identity = 58/150 (38.67%), Postives = 71/150 (47.33%), Query Frame = 1
Query:   91 PMTWYPQDYIK-VPMTDMKMRPQATSGNPGRTYRFYEGKEVFPFGCGLXXXXXXXXXXXXXQNKLYLNQSSSTKMVENQDVVHYKSVPELGTEFCETRKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSV-ILNAKEK 534
            PMTWYPQ+Y+  +PMTDM MR     G PGRTYRFY G  VFPFG GL                L     +S K   N  ++  K+V     +        V + VKN G M G H +L+F  P   G     KQL+GF  + I    EK
Sbjct:  266 PMTWYPQNYVTHLPMTDMAMRADPARGYPGRTYRFYIGPVVFPFGLGLSYTTFAHNLAHGPT--LVSVPLTSLKATANSTMLS-KTVRVSHPDCNALSPLDVHVDVKNTGSMDGTHTLLVFTSPP-DGKWASSKQLMGFHKIHIATGSEK 411          

HSP 2 Score: 50.0618 bits (118), Expect = 2.077e-24
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 3
Query:    3 ILWAGYPGEAGAVALAEVIFGDHNPGGRLP 92
            I+W GYPG+AG  A+A V+FG  NPGG+LP
Sbjct:  237 IIWVGYPGQAGGTAIANVLFGTANPGGKLP 266          
BLAST of CK739918 vs. ExPASy Swiss-Prot
Match: BXL2_ARATH (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.680e-24
Identity = 56/157 (35.67%), Postives = 76/157 (48.41%), Query Frame = 1
Query:   91 PMTWYPQDYI-KVPMTDMKMRPQATSGNPGRTYRFYEGKEVFPFGCGLXXXXXXXXXXXXXQNKLYLNQSSSTKMVE-----NQDVVHYKSVPELGTEFCETRKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEI 543
            PMTWYPQDY+  +PMT+M MRP  +   PGRTYRFY+G  V+PFG GL               +   N + + K++          V  KS+  +    C+     V + V N G   G H +L+F  P   G   P KQLV F+ V +   EK  +
Sbjct:  577 PMTWYPQDYLTNLPMTEMSMRPVHSKRIPGRTYRFYDGPVVYPFGHGL------------SYTRFTHNIADAPKVIPIAVRGRNGTVSGKSI-RVTHARCDRLSLGVHVEVTNVGSRDGTHTMLVFSAPP-GGEWAPKKQLVAFERVHVAVGEKKRV 719          

HSP 2 Score: 50.0618 bits (118), Expect = 2.680e-24
Identity = 18/30 (60.00%), Postives = 25/30 (83.33%), Query Frame = 3
Query:    3 ILWAGYPGEAGAVALAEVIFGDHNPGGRLP 92
            I+WAGYPG+ G  A+A+++FG  NPGG+LP
Sbjct:  548 IVWAGYPGQEGGTAIADILFGSANPGGKLP 577          
BLAST of CK739918 vs. ExPASy Swiss-Prot
Match: BXL6_ARATH (Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.296e-21
Identity = 56/157 (35.67%), Postives = 83/157 (52.87%), Query Frame = 1
Query:   91 PMTWYPQDYIKVPMTDMKMRPQATSGNPGRTYRFYEGKEVFPFGCGL----XXXXXXXXXXXXXQNKLYLNQSSSTKMVENQDVVHYKSVPELGTEFCETRKFLVTIGVKNHGEMAGKHPVLLFVKPARRGNGRPIKQLVGFQSVILNAKEKAEIGF 549
            P TWYP+ +  V M+DM MR  ++ G PGRTYRFY G +V+ FG GL                  ++L   QSS  K +++ + + Y  + ++    CE+ +F V + V N GE+ G H V+LF K     +G P KQL+G+  V + + E  E  F
Sbjct:  597 PTTWYPESFTDVAMSDMHMRANSSRGYPGRTYRFYTGPQVYSFGTGLSYTKFEYKILSAPIRLSLSELLPQQSSHKKQLQHGEELRYLQLDDVIVNSCESLRFNVRVHVSNTGEIDGSHVVMLFSKMPPVLSGVPEKQLIGYDRVHVRSNEMMETVF 753          
The following BLAST results are available for this feature:
BLAST of CK739918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
BXL7_ARATH9.315e-4648.08Probable beta-D-xylosidase 7 OS=Arabidopsis thalia... [more]
BXL5_ARATH2.382e-3338.37Probable beta-D-xylosidase 5 OS=Arabidopsis thalia... [more]
BXL3_ARATH9.188e-2937.11Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL... [more]
BXL4_ARATH3.435e-2839.51Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL... [more]
BXL1_ARATH1.582e-2438.85Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL... [more]
XYNB_PRUPE2.077e-2438.67Putative beta-D-xylosidase (Fragment) OS=Prunus pe... [more]
BXL2_ARATH2.680e-2435.67Probable beta-D-xylosidase 2 OS=Arabidopsis thalia... [more]
BXL6_ARATH3.296e-2135.67Probable beta-D-xylosidase 6 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6310 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739918 ID=CK739918; Name=CK739918; organism=Citrus sinensis; type=EST; length=553bp
GCATTCTGTGGGCAGGTTATCCTGGTGAAGCTGGAGCGGTTGCACTAGCA
GAAGTCATTTTCGGTGACCATAATCCAGGAGGAAGATTACCCGATGACTT
GGTATCCACAAGATTATATAAAAGTACCAATGACGGACATGAAAATGCGA
CCTCAAGCAACTTCAGGTAATCCAGGACGTACATATCGATTCTACGAAGG
GAAAGAGGTCTTCCCATTCGGTTGTGGTCTCAGCTATTCAAAGTATTCCT
ACAAGTTCAAATCTGTCAGCCAAAACAAGCTTTATTTAAATCAGTCATCA
TCTACAAAGATGGTTGAAAATCAAGATGTAGTCCATTACAAGTCTGTTCC
AGAGTTGGGCACAGAATTTTGTGAGACAAGGAAGTTCTTGGTTACCATCG
GAGTTAAAAATCATGGAGAGATGGCGGGTAAGCACCCGGTGTTGCTGTTT
GTGAAGCCTGCAAGGCGTGGAAATGGGAGGCCAATAAAGCAGTTGGTTGG
ATTCCAAAGTGTGATTCTAAATGCCAAAGAAAAAGCTGAAATTGGTTTTG
AGC
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