CK739926

Overview
NameCK739926
Unique NameCK739926
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length517
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10660 contig Csv1_Contig10660:12..524. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739926 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.157e-21
Identity = 54/148 (36.49%), Postives = 84/148 (56.76%), Query Frame = 2
Query:   65 FKAKLNLYKLMFNHLSLDVTSSAPIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFKLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTLWETVHGIKFWEFMYQNP 508
            FKA+  LYK ++  +   ++    + + I +IIH+HG+ I+LS LVS L +  +K   + +LMR L H+G F    +  +EE+Y LT AS LL++    C +P V   LDP   G++  L  W    +LTL+    G  FW+F+ +NP
Sbjct:   14 FKAQALLYKHIYAFID-SMSLKWAVGMNIPNIIHNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEI--ITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNP 158          
BLAST of CK739926 vs. ExPASy Swiss-Prot
Match: 7OMT8_MEDSA (Isoflavone-7-O-methyltransferase 8 OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.817e-21
Identity = 54/148 (36.49%), Postives = 84/148 (56.76%), Query Frame = 2
Query:   65 FKAKLNLYKLMFNHLSLDVTSSAPIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFKLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTLWETVHGIKFWEFMYQNP 508
            FKA+  LYK ++  +   ++    +E+ I +II +HG+ I+LS LVS L +  +K   + +LMR L H+G F    +  +EE+Y LT AS LL++    C +P V   LDP   G++  L  W    +LTL+    G  FW+F+ +NP
Sbjct:   14 FKAQALLYKHIYAFID-SMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEI--ITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNP 158          
BLAST of CK739926 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.817e-21
Identity = 54/148 (36.49%), Postives = 84/148 (56.76%), Query Frame = 2
Query:   65 FKAKLNLYKLMFNHLSLDVTSSAPIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFKLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTLWETVHGIKFWEFMYQNP 508
            FKA+  LYK ++  +   ++    +E+ I +II +HG+ I+LS LVS L +  +K   + +LMR L H+G F    +  +EE+Y LT AS LL++    C +P V   LDP   G++  L  W    +LTL+    G  FW+F+ +NP
Sbjct:   14 FKAQALLYKHIYAFID-SMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEI--ITKEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNP 158          
BLAST of CK739926 vs. ExPASy Swiss-Prot
Match: EOMT1_OCIBA (Eugenol O-methyltransferase OS=Ocimum basilicum GN=EOMT1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.546e-19
Identity = 55/143 (38.46%), Postives = 79/143 (55.24%), Query Frame = 2
Query:   95 MFNHLSLDVTSSA---PIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFKLMRLLVHSGCF-NKTKVNGQEEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKGTE-LTLWETVHGIKFWEFMYQNP 508
            ++NH+     S +    I+LGI DI+H HGR +TLS+L+ ++ I   KT    +LMR LV+S  F  +   N QE  Y LT AS LL+K+ P   +P V + LDP F   +  +S WF   +  T +E  +G  FWE +   P
Sbjct:   22 VWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQLLQSIPINKEKTQCFQRLMRALVNSNFFIEENNSNNQEVCYWLTPASCLLLKEAPLTVTPLVQVVLDPTFTNPWHHMSEWFTHEKHATQFEAANGCTFWEKLANEP 164          
BLAST of CK739926 vs. ExPASy Swiss-Prot
Match: CVMT1_OCIBA (Chavicol O-methyltransferase OS=Ocimum basilicum GN=CVOMT1 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.546e-19
Identity = 54/142 (38.03%), Postives = 76/142 (53.52%), Query Frame = 2
Query:   95 MFNHLSLDVTSSA---PIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFKLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFK-GTELTLWETVHGIKFWEFMYQNP 508
            ++NH+     S +    I+LGI DI+H H   +TLS+L+ A+ I   K+    +LMR LV+S  F +   N QE  Y LT AS LL+K  P   +P V + LDP F   +  +S WFK     T +E  +G  FWE +   P
Sbjct:   22 VWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQLLKAIPINKEKSQSFQRLMRALVNSNFFIEENSNNQEVCYWLTPASRLLLKGAPLTVAPLVQVVLDPTFTNPWHYMSEWFKHENHATQFEAANGCTFWEKLANKP 163          
BLAST of CK739926 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.656e-13
Identity = 45/152 (29.61%), Postives = 73/152 (48.03%), Query Frame = 2
Query:   53 RKSCFKAKLNLYKLMFNHLSLDVTSSAPIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFKLMRLLVHSGCFNKTKVNGQEEAYGLTAASTLLIKDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKGTELTLWETVHGIKFWEFMYQNP 508
            +K    ++  L+  ++      V   A ++L +A+IIH+ G ++TLSEL S L  QP     L+++MR LVH   F K  ++G E  YGL   +  L+K    C   ++    D  F+  +  L     G   T +E   G   W +M ++P
Sbjct:    4 KKDNLSSQAKLWNFIYGFAESLVLKCA-VQLDLANIIHNSGTSMTLSELSSRLPSQPVNEDALYRVMRYLVHMKLFTKASIDG-ELRYGLAPPAKYLVKGWDKCMVGSILAITDKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHP 153          
BLAST of CK739926 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.073e-12
Identity = 49/154 (31.82%), Postives = 76/154 (49.35%), Query Frame = 2
Query:   56 KSCFKAKLNLYKLMFNHLSLDVTSSAPIELGIADIIHSHGRAITLSELVSALDIQPTKTTGLFKLMRLLVHSGCFNKTKVNG-----QEEAYGLTAASTLLI--KDKPYCFSPNVSLFLDPCFVGAFQSLSSWFKG--TELTLWETVHGIKFWE 490
            +S   A+L L+   F  +      SA I L IAD IH HG A +LS+++S + + P++ + L +LMR+L  +  F    + G      E  Y LT  S LLI  +      +P  ++ LDP  V  F  L +WF+    +  +++  HG   WE
Sbjct:   11 QSLLDAQLELWHTTFAFMKSMALKSA-IHLRIADAIHLHGGAASLSQILSKVHLHPSRVSSLRRLMRVLTTTNVFGTQPLGGGSDDDSEPVYTLTPVSRLLIGSQSSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWE 163          
The following BLAST results are available for this feature:
BLAST of CK739926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
7OMT9_MEDSA2.157e-2136.49Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]
7OMT8_MEDSA2.817e-2136.49Isoflavone-7-O-methyltransferase 8 OS=Medicago sat... [more]
7OMT6_MEDSA2.817e-2136.49Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
EOMT1_OCIBA1.546e-1938.46Eugenol O-methyltransferase OS=Ocimum basilicum GN... [more]
CVMT1_OCIBA1.546e-1938.03Chavicol O-methyltransferase OS=Ocimum basilicum G... [more]
6OMT_COPJA1.656e-1329.61(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
ZRP4_MAIZE1.073e-1231.82O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6318 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE61H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739926 ID=CK739926; Name=CK739926; organism=Citrus sinensis; type=EST; length=517bp
GCTTAATTTAATTGATCATCAGTATCTATGGATGCGAATCAAGATCAAGG
AGCGAAAGAGTTGTTTCAAGGCCAAGCTCAACCTGTATAAGCTCATGTTT
AATCATTTAAGCCTCGATGTCACCTCAAGTGCGCCGATTGAGCTAGGCAT
AGCGGATATAATTCACAGCCACGGACGGGCCATCACTCTTTCTGAGTTGG
TTTCGGCACTTGATATTCAGCCTACAAAAACGACTGGCTTATTCAAGCTC
ATGCGCTTGTTAGTTCACTCGGGCTGCTTTAACAAAACCAAAGTCAATGG
ACAAGAAGAAGCATACGGGCTCACAGCTGCTTCTACTCTGCTCATCAAAG
ATAAGCCCTACTGTTTTTCACCAAATGTTTCATTATTTCTTGACCCATGT
TTTGTCGGAGCATTTCAGTCTTTAAGTAGTTGGTTCAAAGGGACTGAGCT
CACGTTGTGGGAAACTGTTCATGGAATCAAGTTCTGGGAATTTATGTATC
AAAACCCCTGGAATAAA
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