CK739941
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: TSAP1_HUMAN (tRNA selenocysteine 1-associated protein 1 OS=Homo sapiens GN=TRNAU1AP PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.437e-30 Identity = 74/158 (46.84%), Postives = 107/158 (67.72%), Query Frame = 1 Query: 1 ETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRI 462 E +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ Sbjct: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRL 170
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: TSAP1_BOVIN (tRNA selenocysteine 1-associated protein 1 OS=Bos taurus GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.877e-30 Identity = 73/158 (46.20%), Postives = 107/158 (67.72%), Query Frame = 1 Query: 1 ETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRI 462 E +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G + ++P+R+ Sbjct: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAIGLGSKPVRL 170
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: TSAP1_RAT (tRNA selenocysteine 1-associated protein 1 OS=Rattus norvegicus GN=Trnau1ap PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.452e-30 Identity = 74/158 (46.84%), Postives = 106/158 (67.09%), Query Frame = 1 Query: 1 ETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRI 462 E +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V +P+R+ Sbjct: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRL 170
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: TSAP1_PONAB (tRNA selenocysteine 1-associated protein 1 OS=Pongo abelii GN=TRNAU1AP PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.182e-30 Identity = 73/158 (46.20%), Postives = 106/158 (67.09%), Query Frame = 1 Query: 1 ETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRI 462 E +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+ ++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D+ TG +KGYGFV+F DE EQ RA+TE G V ++P+R+ Sbjct: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYVTYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRL 170
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: TSAP1_MOUSE (tRNA selenocysteine 1-associated protein 1 OS=Mus musculus GN=Trnau1ap PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 5.462e-30 Identity = 74/158 (46.84%), Postives = 105/158 (66.46%), Query Frame = 1 Query: 1 ETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGE--QNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNG-VFCSTRPMRI 462 E +++ FA GE V++VK+IRN+ TG GY F+EF A AE+ L NG P+P + F+LN+A++G ++ D++P++++FVGDL DV D ML E F YPS +G KVV+D TG +KGYGFV+F DE EQ RA+TE G V +P+R+ Sbjct: 16 ENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYG--KQPDNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDP-TGVSKGYGFVKFTDELEQKRALTECQGAVGLGCKPVRL 170
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: YG41_SCHPO (Uncharacterized RNA-binding protein C23E6.01c OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 7.381e-27 Identity = 62/157 (39.49%), Postives = 93/157 (59.24%), Query Frame = 1 Query: 1 ETYLNTCFAHTGEVVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRD--DTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIG 465 E ++ + G+ V VK+IRN+ TG GY F+EF S A + + N P+P F+LNWAS G ++ +++IFVGDL+ +V ++ + F +RY S K AK++ D T ++GYGFVRF DE++Q A+ EM G C RP+R+G Sbjct: 106 EAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFASPHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDVYSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVG 261
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: CSX1_SCHPO (RNA-binding post-transcriptional regulator csx1 OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 2.805e-26 Identity = 64/158 (40.51%), Postives = 90/158 (56.96%), Query Frame = 1 Query: 4 TYLNTCFAHTGEVVAVKVIRNKQTGQ--IEGYGFIEFISRAGAERVLQTFNGTPMPNGEQNFRLNWASFGAGEKRDDT---PDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRI 462 T++ +A E V VKV+R+K + + Y F++F S A AER L +N T +P F+LNWA+ G + + P+ +IFVGDL D L TFR+ YPS AK+++D +TG ++ YGFVRF E EQ A+ M G C RP+RI Sbjct: 99 TFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRI 256
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: TSP1L_DANRE (tRNA selenocysteine 1-associated protein 1-like OS=Danio rerio GN=trnau1apl PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.539e-24 Identity = 62/158 (39.24%), Postives = 96/158 (60.76%), Query Frame = 1 Query: 1 ETYLNTCFAHTGEVV-AVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMP--NGEQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTE-MNGVFCSTRPMRI 462 E ++ F+ GE VK+I ++ TG GY F+E A +R +Q NG +P N + F+LN+A++G ++ + P+ ++FVGDL ++V DY L + F ++PS KGAKVV D G ++GYGFV+F DE+EQ +A+ E N +P+RI Sbjct: 19 ENFIKQAFSTMGETAFGVKIITHRVTGGSAGYCFVEMADEASVDRCVQRLNGKLVPGSNPPRKFKLNYATYG--KRPEPGPEFSVFVGDLTSEVDDYQLHQFFLKKFPSCKGAKVVTDPY-GNSRGYGFVKFSDENEQKKALEEFQNASGLGGKPIRI 173
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: NGR1_YEAST (Negative growth regulatory protein NGR1 OS=Saccharomyces cerevisiae GN=NGR1 PE=1 SV=2) HSP 1 Score: 99.7525 bits (247), Expect = 1.032e-20 Identity = 61/175 (34.86%), Postives = 97/175 (55.43%), Query Frame = 1 Query: 88 GYGFIEFISRAGAERVLQTFNGTPMPNG-------------EQNFRLNWASFGAGEKR-DDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGQL-----LIRKLFQGQQQYPKASYQNSQVAQSDDD 555 GY F+EF ++ A+ L + N TP+PN ++ FRLNWAS + TP+ ++FVGDL+ T+ L F+ R+ S K +V+ D LTG ++ +GFVRFGDE E+ RA+ EM+G + R +R+ ++ +L + QQQ + Q+ Q+ Q D++ Sbjct: 129 GYCFVEFETQKDAKFAL-SLNATPLPNFYSPTTNSQTNPTFKRTFRLNWASGATLQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFKSVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMMLQLQEQQQQQQQLQQQHQQLDQEDNN 302
BLAST of CK739941 vs. ExPASy Swiss-Prot
Match: TSAP1_DANRE (tRNA selenocysteine 1-associated protein 1 OS=Danio rerio GN=trnau1ap PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.491e-19 Identity = 62/193 (32.12%), Postives = 97/193 (50.26%), Query Frame = 1 Query: 1 ETYLNTCFAHTGE-VVAVKVIRNKQTGQIEGYGFIEFISRAGAERVLQTFNGTPMPNG--EQNFRLNWASFGAGEKRDDTPDHTIFVGDLAADVTDYMLQETFRARYPSTKGAKVVIDRLTGRTKGYGFVRFGDESEQLRAMTEMNGVFCSTRPMRIGQLLIRKLFQGQQQYPKASYQNSQVAQSDDDPNNTT 570 E ++ FA GE VV +++IR+K TG+ GYGF+E ER L+ NG P+P + F+L+ +++G K+ ++ ++FV DL DV D ML E F + S K+V+D G +K GFV F E EQ RA+ ++ G +G+ +R + K +Q+ Q D N + Sbjct: 15 EDFICRAFAQMGETVVKIRLIRDKITGKNAGYGFVELADDTAVERCLRKVNGKPLPGATPPKRFKLSRSNYG---KQGESSTFSLFVSDLTPDVDDGMLYEFFHYHFSSCCSGKIVLD-ANGHSKCCGFVSFESEREQKRALVDLQGA------TGLGKKALRLSLASSRVNKKKESSENQIWQYHSDSKNAS 197 The following BLAST results are available for this feature:
BLAST of CK739941 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739941 ID=CK739941; Name=CK739941; organism=Citrus sinensis; type=EST; length=574bpback to top |