CK739965

Overview
NameCK739965
Unique NameCK739965
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length314
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK739965 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.642e-13
Identity = 39/96 (40.62%), Postives = 52/96 (54.17%), Query Frame = 2 
Query:   26 AIAALIMFLFLTPKSEAAISCSDVLKDLRPCVNYLKSGSGKPPXXXXXXXXXXXXXXXXXXXXXXXXGCIKTAAQKMNPNSQLAQALPTNCGITLP 313
            AI +++   F+   SE+AISCS VL+DL+PCV+YL SGSG PP                         CIK+ A  +    +LAQAL +NCG +LP
Sbjct:    8 AIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVTVKPELAQALASNCGASLP 103
The following BLAST results are available for this feature:
BLAST of CK739965 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NLTP8_ARATH4.642e-1340.63Non-specific lipid-transfer protein 8 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6787 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68F05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739965 ID=CK739965; Name=CK739965; organism=Citrus sinensis; type=EST; length=314bp
GAACTCCTCAAGGGTAGTAGTCTCAGCCATTGCTGCTCTTATCATGTTTC
TCTTTCTTACTCCTAAGTCAGAGGCTGCAATTTCTTGTAGTGATGTGTTG
AAAGACCTGAGACCTTGTGTGAATTACCTTAAGAGTGGATCTGGGAAACC
ACCAGCTGCATGTTGCAGTGGAGCCTCAGCTCTTGCATCTACTGCAACAA
GCACTGCTGATAAGAAAACCGCTTGTGGATGCATTAAGACAGCAGCCCAG
AAAATGAATCCTAATTCCCAATTAGCCCAGGCACTCCCTACCAACTGCGG
AATCACCTTGCCTG
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