CK739967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 1.768e-52 Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 2 Query: 62 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 MAT +TVKDVSPHEFVKAY+AHLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLR GLGVG+FRRIYGGSKRNGSRPPHFCKSSG +ARHILQQL Sbjct: 1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQL 108
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 3.940e-52 Identity = 93/108 (86.11%), Postives = 102/108 (94.44%), Query Frame = 2 Query: 62 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 MAT +TVKDVSPH+FVKAY++HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARK+YLR GLGVG+FRRIYGGSKRNGSRPPHFCKSSG IARHILQQL Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQL 108
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 5.145e-52 Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 2 Query: 62 MATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 MAT +TVKDVSPH+FVKAY++HLKRSGK+ELP WTDIVKT + KELAPYDPDWYY+RAASMARKIYLR GLGVG+FRRIYGGSKRNGSRPPHFCKSSG IARHILQQL Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQL 108
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19_ORYSJ (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 2.162e-50 Identity = 91/107 (85.05%), Postives = 101/107 (94.39%), Query Frame = 2 Query: 65 ATARTVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 +TARTVKDV+PHEFVKAYSAHLKRSGKMELP W DIVKTA+FKEL PYDPDWYY RAAS+ARKIYLRQG+GVG F++IYGG +RNGSRPPHFCKSSGAI+R+ILQQL Sbjct: 4 STARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQL 110
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19_MYAAR (40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 3.351e-35 Identity = 61/103 (59.22%), Postives = 84/103 (81.55%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 +VKDVS HEF +A++A LK+SGKM++P WTD VKT FKEL+PY+PDWY++RAAS+ R +Y+R G+GSF +IYGG +R G+ P HFCK++G+I+R +LQ L Sbjct: 4 SVKDVSSHEFTRAFAAFLKKSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSL 106
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19_BRABE (40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 3.834e-31 Identity = 61/103 (59.22%), Postives = 80/103 (77.67%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 TVKDV+ EFVKA++A LK+SGK++LP W D+VKTA KELAPYDPDW+Y+RAAS AR +Y+R G+GVG+ +IYGG KR G++P F S ++R +LQ L Sbjct: 6 TVKDVNQQEFVKAFAAFLKKSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSL 108
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19_RAT (40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 8.541e-31 Identity = 61/103 (59.22%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 TVKDV+ EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS +IYGG +RNG RP HF + S ++AR +LQ L Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQAL 107
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19_MOUSE (40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 8.541e-31 Identity = 61/103 (59.22%), Postives = 78/103 (75.73%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 TVKDV+ EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS +IYGG +RNG RP HF + S ++AR +LQ L Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQAL 107
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19_AEQIR (40S ribosomal protein S19 OS=Aequipecten irradians GN=RPS19 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.485e-30 Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 +VKDV H F KA +A LK+SGKM++P W I+K ++F EL+PYD DW+Y RAAS+ R +Y+R GVG+ +IYG KRNG+ P H+C+SSG++AR +LQ L Sbjct: 4 SVKDVDSHTFTKALAAFLKKSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRKRNGTVPSHYCRSSGSVARRVLQAL 106
BLAST of CK739967 vs. ExPASy Swiss-Prot
Match: RS19_PONAB (40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3) HSP 1 Score: 129.798 bits (325), Expect = 4.239e-30 Identity = 60/103 (58.25%), Postives = 77/103 (74.76%), Query Frame = 2 Query: 77 TVKDVSPHEFVKAYSAHLKRSGKMELPPWTDIVKTAQFKELAPYDPDWYYVRAASMARKIYLRQGLGVGSFRRIYGGSKRNGSRPPHFCKSSGAIARHILQQL 385 TVKDV+ EFV+A +A LK+SGK+++P W D VK A+ KELAPYD +W+Y RAAS AR +YLR G GVGS +IYGG +RNG P HF + S ++AR +LQ L Sbjct: 5 TVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQAL 107 The following BLAST results are available for this feature:
BLAST of CK739967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CK739967 ID=CK739967; Name=CK739967; organism=Citrus sinensis; type=EST; length=386bpback to top |