CK739971

Overview
NameCK739971
Unique NameCK739971
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2701 contig Csv1_Contig2701:800..1364. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_RENSM (Transaldolase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=tal PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.444e-40
Identity = 94/189 (49.74%), Postives = 117/189 (61.90%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSF 558
            LIFSL RY  VI+A+L G+E +  +  DLS++ SVASFFVSRVDT IDK L+ + T EA  L+G                 FS  RW  L + GA  QR LWAST VK+PAYPDTLYV  L+ P+ V+TMP++ L A  DHG VS  TI     EA G+ +ALE LGI +N V   LE EG++ F  S+
Sbjct:  165 LIFSLGRYRAVINAFLLGIEKAKANGHDLSQIHSVASFFVSRVDTEIDKRLDALNTDEAKSLKGKAGVANARLAYQVFEEVFSSERWALLAEAGALPQRPLWASTGVKDPAYPDTLYVTELVAPNVVNTMPEKTLDATADHGVVSGNTISGRYDEANGVLNALEGLGISYNEVVALLEKEGLEKFVASW 353          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_ACIC1 (Transaldolase OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=tal PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 7.444e-40
Identity = 95/189 (50.26%), Postives = 119/189 (62.96%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEAS--GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSF 558
            LIFS+ RYE+VIDA+ DG+E +     DLSR+ SVASFFVSRVDT +DK LEKIG  EAL  +                  F+ PRW AL  KGA+ QR LWASTS K+P+ PDTLYV  L+ P TV+TMP+  LQA  DHG +   TI    ++A+    AL  LGID++ V   LE EGV+ F+ S+
Sbjct:  165 LIFSVKRYEQVIDAFFDGVERAIEAGHDLSRLASVASFFVSRVDTEVDKRLEKIGG-EALQWKAKAAVANARLAYRTYEEKFATPRWQALAAKGARPQRPLWASTSTKDPSLPDTLYVTELVAPGTVNTMPESTLQAVYDHGVIRGDTIRGYYADAQATLDALATLGIDYDDVTDTLEREGVEKFEASW 352          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_FRASN (Transaldolase OS=Frankia sp. (strain EAN1pec) GN=tal PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.829e-39
Identity = 95/191 (49.74%), Postives = 118/191 (61.78%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIF+L RYE V+DA++ GLE   A+G  D+S V SVASFFVSRVD+ +D  L KIGTP+A  LR                  FS PRW+ L   GAK QR LWASTS K+P  PDTLYV  LI P TV+TMP+  L+AF DHG V   TI  N  +A  + + L +LG+D   V   LE+EGV  F+ S++
Sbjct:  165 LIFALDRYEAVMDAFMTGLEQALAAG-RDISDVASVASFFVSRVDSEVDGRLAKIGTPKAEALRSKAAIANARLAYELYEKIFSTPRWERLAAAGAKPQRPLWASTSTKDPGLPDTLYVTELIAPGTVNTMPEATLEAFADHGVVPGDTITPNYEDARAVLAELTELGVDMADVVEVLEVEGVRKFEDSWN 354          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_FRASC (Transaldolase OS=Frankia sp. (strain CcI3) GN=tal PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 2.829e-39
Identity = 94/190 (49.47%), Postives = 120/190 (63.16%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSF 558
            LIF L RY+ VIDA++ GLE   A+G  D++ + SVASFFVSRVDT +D+ LEKIGT EA  LRG                 F+ PRW AL   GAK QR LWASTS K+P+ PDT+YV  LI P TV+TMP+  L+AF DHG+V+  TI     EA  +++ L  +GID + V   LE +GV  F+ S+
Sbjct:  165 LIFGLDRYDAVIDAFMTGLEKALAAG-RDITDLASVASFFVSRVDTEVDQRLEKIGTSEAKALRGRAAVANARLAFERYEKAFATPRWAALAAAGAKPQRPLWASTSTKDPSLPDTIYVTELIAPGTVNTMPEATLEAFADHGSVTGETIRPRYEEAHEVFAQLTAVGIDLDDVIETLESQGVQKFEDSW 353          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL2_STRAW (Transaldolase 2 OS=Streptomyces avermitilis GN=tal2 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 4.825e-39
Identity = 97/191 (50.79%), Postives = 119/191 (62.30%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEAS---GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIFSL RY  V+DAYL GLE +   GL DLS++ SVASFFVSRVDT IDK ++ +GTPEA   RG                 FS  RW AL K  A KQR LWAST VK+PAY DT+YV  L+ P+TV+TMP+  L+A  DHG +   TI     +A     A+EKLGI ++ V   LE EGVD F+ S++
Sbjct:  165 LIFSLERYRMVMDAYLAGLEKAKERGL-DLSKIHSVASFFVSRVDTEIDKRIDALGTPEAKAARGKAGLANARLAYEAYEAVFSTDRWLALDKAQANKQRPLWASTGVKDPAYKDTMYVEELVAPNTVNTMPEATLEATADHGEIRGNTIAGTYEQARADLDAVEKLGIAYDDVVQLLEEEGVDKFEASWN 354          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_FRAAA (Transaldolase OS=Frankia alni (strain ACN14a) GN=tal PE=3 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 6.302e-39
Identity = 90/190 (47.37%), Postives = 119/190 (62.63%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEAS--GLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIF L RY+ VIDA++ G+E +     D+S + SVASFFVSRVD+ +D  L+KIGTPEA  L                   F+ PRW AL  KGAK QR LWASTS K+P+ PDT+YV+ LI P TV+TMP+  LQAF DHG V   TI  +  +A  +++AL  +G+D + V   LE +GV  F+ S++
Sbjct:  165 LIFGLDRYDAVIDAFMSGVEQAIEAGRDVSDLASVASFFVSRVDSEVDARLDKIGTPEAKALHAKTAIANARLAYERYEKAFATPRWKALAAKGAKPQRPLWASTSTKDPSLPDTIYVSELIAPGTVNTMPEATLQAFADHGQVKGETIRPHYDDARQVFAALAAVGVDIDDVIETLETQGVQKFEDSWN 354          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_ARTCA (Transaldolase OS=Arthrobacter chlorophenolicus (strain A6 / ATCC 700700 / DSM 12829 / JCM 12360) GN=tal PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 2.395e-38
Identity = 92/189 (48.68%), Postives = 116/189 (61.38%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSF 558
            LIFSL RY  VI+A+  GLE +  +  DLS++ SVASFFVSRVD+ IDK L+KIGT EA  L+G                 F+  RW  L + GA  QR LWAST VK+PAYPDTLYV  L+ P  V+TMP++ L A  DHG V+  T+    ++A     ALEKLG+ +N V   LE EG+D F  S+
Sbjct:  165 LIFSLERYRAVINAFQAGLEQAKENGHDLSKIHSVASFFVSRVDSEIDKRLDKIGTDEAKALKGKAGLANARLAYQVYEELFATERWALLAEAGALPQRPLWASTGVKDPAYPDTLYVTELVAPGVVNTMPEKTLDATFDHGVVTGDTVSGTYADANATLDALEKLGVSYNEVVALLESEGLDKFVASW 353          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_LEIXX (Transaldolase OS=Leifsonia xyli subsp. xyli GN=tal PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 3.127e-38
Identity = 95/186 (51.08%), Postives = 117/186 (62.90%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLE---ASGLSDLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSF 546
            LIFSL RY  VIDAYL GLE   A+G+ DLS + SVASFFVSRVDT IDK L  IGT EAL L+                  F+G R  ALV  GA +QR LWAST VK+P+ PDTLYV  L+ P+TV+TMP++ L A  DH  ++  T+    + A+G+  AL  LG+D++ V   LE EGVD F
Sbjct:  172 LIFSLERYRGVIDAYLTGLEKAKAAGI-DLSGIQSVASFFVSRVDTEIDKRLTAIGTGEALALKSKAGIANARLAYKVYEEAFAGDRAKALVAAGANEQRPLWASTGVKDPSLPDTLYVTELVAPNTVNTMPEKTLDATFDHAQLAGDTVTGEYAGAQGVLDALAALGVDYDDVTATLEREGVDKF 356          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_THEFY (Transaldolase OS=Thermobifida fusca (strain YX) GN=tal PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.027e-37
Identity = 91/190 (47.89%), Postives = 113/190 (59.47%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGPRWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAVS-RTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSFD 561
            LIFSL RY  V+DA+L GLE +  +  DLS + SVASFFVSRVDT +DK L KI T EA+ LRG                 FS  RW AL + GA+ QR LWAST VK+P  PDTLYV  L+ P TV+TMP   L A  DHG ++  T+  +   A     A+E +G+  + V   LE EGVD F KS++
Sbjct:  165 LIFSLERYRAVMDAFLAGLEQAQQAGRDLSTIHSVASFFVSRVDTEVDKRLSKIATEEAVALRGKTALANARLAYAAYEEVFSSARWTALAQAGARPQRPLWASTGVKDPELPDTLYVTELVAPGTVNTMPQATLDAVADHGTITGDTVRGHYDAARAHLDAVESVGVSMSDVVETLEDEGVDKFVKSWE 354          
BLAST of CK739971 vs. ExPASy Swiss-Prot
Match: TAL_MYCUA (Transaldolase OS=Mycobacterium ulcerans (strain Agy99) GN=tal PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.898e-37
Identity = 91/190 (47.89%), Postives = 119/190 (62.63%), Query Frame = 1
Query:    1 LIFSLARYEEVIDAYLDGLEASGLS--DLSRVTSVASFFVSRVDTLIDKMLEKIGTPEALDLRGXXXXXXXXXXXXXXXXXFSGP-RWDALVKKGAKKQRLLWASTSVKNPAYPDTLYVAPLIGPDTVSTMPDQALQAFVDHGAV-SRTIDLNVSEAEGIYSALEKLGIDWNYVGT*LELEGVDSFKKSF 558
            LIFS+ R+  V+DAYL G+E +  +  DLS++ SVASFFVSRVDT ID  LE+IG+ EAL LRG                 F G  R+ AL ++GA+ QR LWAST VKNP Y DTLYV  L+ P TV+TMP++ L A  DHG V   +I     +A+ ++  LE +GID + V   LE EGV+ F+ S+
Sbjct:  168 LIFSVDRHRGVMDAYLTGMEKAAQAGHDLSKIHSVASFFVSRVDTEIDNRLEQIGSAEALALRGQAGVANARLAYAAYQEVFEGDARYQALKERGARVQRPLWASTGVKNPDYSDTLYVTELVAPHTVNTMPEKTLDAVADHGVVKGDSITGTSGDAQQVFDKLEAIGIDLSDVFDVLESEGVEKFEASW 357          
The following BLAST results are available for this feature:
BLAST of CK739971 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TAL_RENSM7.444e-4049.74Transaldolase OS=Renibacterium salmoninarum (strai... [more]
TAL_ACIC17.444e-4050.26Transaldolase OS=Acidothermus cellulolyticus (stra... [more]
TAL_FRASN2.829e-3949.74Transaldolase OS=Frankia sp. (strain EAN1pec) GN=t... [more]
TAL_FRASC2.829e-3949.47Transaldolase OS=Frankia sp. (strain CcI3) GN=tal ... [more]
TAL2_STRAW4.825e-3950.79Transaldolase 2 OS=Streptomyces avermitilis GN=tal... [more]
TAL_FRAAA6.302e-3947.37Transaldolase OS=Frankia alni (strain ACN14a) GN=t... [more]
TAL_ARTCA2.395e-3848.68Transaldolase OS=Arthrobacter chlorophenolicus (st... [more]
TAL_LEIXX3.127e-3851.08Transaldolase OS=Leifsonia xyli subsp. xyli GN=tal... [more]
TAL_THEFY2.027e-3747.89Transaldolase OS=Thermobifida fusca (strain YX) GN... [more]
TAL_MYCUA5.898e-3747.89Transaldolase OS=Mycobacterium ulcerans (strain Ag... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6793 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE68F12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK739971 ID=CK739971; Name=CK739971; organism=Citrus sinensis; type=EST; length=565bp
CTCATATTCTCCCTGGCTAGATATGAAGAAGTCATTGATGCTTACTTGGA
TGGCCTTGAGGCTTCTGGGCTGAGTGACCTTTCCAGAGTTACAAGTGTTG
CATCCTTTTTCGTTAGTCGAGTAGACACCCTTATTGACAAAATGCTTGAA
AAGATTGGAACCCCAGAAGCCCTAGATCTCCGAGGAAAGGCAGCAGTAGC
TCAGGCAGCTCTAGCATACCAGCTGTACCAGAAGAAGTTCTCTGGTCCAA
GATGGGACGCTCTTGTGAAGAAAGGTGCAAAGAAGCAGAGACTTCTGTGG
GCCTCAACCAGTGTAAAGAATCCTGCCTACCCTGACACTCTATATGTTGC
TCCTCTCATTGGACCTGATACGGTTTCAACCATGCCAGACCAAGCTCTCC
AAGCATTTGTTGATCATGGTGCAGTTTCAAGAACAATTGACTTGAATGTT
TCTGAGGCTGAAGGCATTTACAGTGCACTGGAGAAGTTGGGAATTGATTG
GAACTACGTTGGCACTTAACTCGAACTTGAAGGGGTAGATTCTTTCAAGA
AGAGCTTTGATAGTC
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