CK740010

Overview
NameCK740010
Unique NameCK740010
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1436 contig Csv1_Contig1436:1..594. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 5.647e-49
Identity = 93/178 (52.25%), Postives = 124/178 (69.66%), Query Frame = 2
Query:   62 EEEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQ-MKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPISHEVLGVEVITQE 592
            +E+VKL G   SPF  R+++ALKLKGV ++++E +L NKS  LLKYNP+HKK+PV VHN + I ESL+I+EYID+ WKNNPILP DP+QRA+ARFW+KFID+K++    K+                 + ++ LENEL  K FFGGE  GLVDI A  +AFW PI  E+ G+++ T E
Sbjct:    5 QEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSE 182          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTXA_ARATH (Glutathione S-transferase 103-1A OS=Arabidopsis thaliana GN=103-1A PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.817e-47
Identity = 96/182 (52.75%), Postives = 129/182 (70.88%), Query Frame = 2
Query:   56 MAE-EEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKL-LENELNGKDFFGGEAIGLVDIVA-TVVAFWFPISHEVLGVEVITQE 592
            MAE EEVKL G W SPFSRR+E+ALKLKG+P+EY+E  L NKSP LL  NPIHKK+PVLVHNGK+I+ES +ILEYID+ W  NPILP+DP++R+ ARF+AK +DE+++  G  +                 ++ + LE EL GKD+FGG+ +G +D VA +++ F      E +G+EVIT+E
Sbjct:    1 MAEKEEVKLLGIWASPFSRRVEMALKLKGIPYEYVEEILENKSPLLLALNPIHKKVPVLVHNGKTILESHVILEYIDETWPQNPILPQDPYERSKARFFAKLVDEQIMNVGFISMARADEKGREVLAEQVRELIMYLEKELVGKDYFGGKTVGFLDFVAGSLIPFCLERGWEGIGLEVITEE 182          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 3.426e-46
Identity = 92/175 (52.57%), Postives = 118/175 (67.43%), Query Frame = 2
Query:   68 EVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPISHEVLGVEVITQE 592
            EVKL G W SPFSRR+E ALK+KGV +EYIE D  NKS  LL+ NPIHKK+PVL+HNGK IVES++ILEYID+ ++   ILP+DP+ RA+ARFWAKF+D+K+ A  +K                   +K+L+NEL  K FF G+  G  DI A +VAFW  +  E  GV ++T E
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVPAV-VKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSE 176          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 3.545e-43
Identity = 86/175 (49.14%), Postives = 114/175 (65.14%), Query Frame = 2
Query:   68 EVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPISHEVLGVEVITQE 592
            EVKL G W SPF+ R+E ALKLKGV +EYIE D  NKS  LL+ NP+HKK+PVL+HNGK IVES++ILEYID+ ++   ILP+DP+ RA+ARFW+KF+ +K+ A  +                    +K+L+NEL  K FF G+  G  DI A +V FW  +  E  GV ++T E
Sbjct:    3 EVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETFEGPSILPKDPYDRALARFWSKFLGDKVAAV-VNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSE 176          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.032e-42
Identity = 86/175 (49.14%), Postives = 113/175 (64.57%), Query Frame = 2
Query:   68 EVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPISHEVLGVEVITQE 592
            EVKL G W SPFS R+E ALK+KGV +EYIE D  NKS  LL+ NP++KK+PVL+HNGK IVES+IILEYID+ ++   ILP+DP+ RA+ARFWAKF+D+K+ A  +                    +K+L+NEL  K FF G+  G  DI A +V FW  +  E  G  ++  E
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPSILPKDPYDRALARFWAKFLDDKVAAV-VNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSE 176          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 3.669e-40
Identity = 86/175 (49.14%), Postives = 112/175 (64.00%), Query Frame = 2
Query:   68 EVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNPILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPISHEVLGVEVITQE 592
            EVKL G   SPFS R+E ALK+KGV +E+IE DL NKSP LL+ NPIHKKIPVL+HNGK I ES++ILEYID+ ++   ILP+DP+ RA+ARFWAK++++K  A   K+                  +K+L+NE   K  F G+  G  DIVA   A +  I  EV G+ + T E
Sbjct:    3 EVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAFEGPSILPKDPYDRALARFWAKYVEDKGAAV-WKSFFSKGEEQEKAKEEAYEMLKILDNEFKDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSE 176          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.641e-35
Identity = 73/165 (44.24%), Postives = 100/165 (60.61%), Query Frame = 2
Query:   56 MAEEEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNN-PILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWF 547
            M    V L   W S F  R+ +AL LKG+ +E  E +LS+KSP LL+ NP+HKKIP+L+HN K+I ESL ILEYID+ W +  P+LP DP++R+ ARFWA +ID+K+ +TG +                   +K LE EL  K +FGG+ +G VD+       WF
Sbjct:    1 MESNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWF 165          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 4.641e-35
Identity = 81/174 (46.55%), Postives = 102/174 (58.62%), Query Frame = 2
Query:   56 MAEEEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNNP--ILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPISHEVLG 571
            MA EEV L   W S F  R+ +AL  K + +EY E DL NKSP LL+ NPIHKKIPVL+HNGK I ES+I +EYI++ WK+    +LP DP+ RA ARFWA +ID+KL   G K                   +K+LE  L  K +FGGE+ G VDI       WF  ++E  G
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWF-YAYETFG 173          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.303e-34
Identity = 79/174 (45.40%), Postives = 102/174 (58.62%), Query Frame = 2
Query:   56 MAEEEVKLYGTWVSPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNN--PILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWFPISHEVLG 571
            MA EEV L   W S F  R+ +AL  K + +EY + DL NKSP LL+ NPIHKKIPVL+HNGK I ES+I +EYI++ WK+    +LP DP+ RA ARFWA +ID+KL   G K                   +K+LE  L  + +FGGE+ G VDI       WF  ++E  G
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWF-YAYETFG 173          
BLAST of CK740010 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34
Identity = 71/152 (46.71%), Postives = 93/152 (61.18%), Query Frame = 2
Query:   95 SPFSRRIELALKLKGVPFEYIEVDLSNKSPELLKYNPIHKKIPVLVHNGKSIVESLIILEYIDDKWKNN-PILPRDPHQRAVARFWAKFIDEKLLATGMKASXXXXXXXXXXXXXXXXQMKLLENELNGKDFFGGEAIGLVDIVATVVAFWF 547
            S F  R+ +AL LKG+ +E  E +LS+KSP LL+ NP+HKKIP+L+HNGK I ESL ILEYID+ W    P+LP DP+QR+ ARFWA +ID K+ +TG +                    K LE EL  K +FGG+ +G VD+       WF
Sbjct:   14 SSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWF 165          
The following BLAST results are available for this feature:
BLAST of CK740010 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
GSTX6_SOYBN5.647e-4952.25Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXA_ARATH1.817e-4752.75Glutathione S-transferase 103-1A OS=Arabidopsis th... [more]
GSTX1_TOBAC3.426e-4652.57Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC3.545e-4349.14Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC1.032e-4249.14Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU3.669e-4049.14Probable glutathione S-transferase OS=Solanum tube... [more]
GSTXA_TOBAC4.641e-3544.24Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX4_TOBAC4.641e-3546.55Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.303e-3445.40Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_NICPL8.753e-3446.71Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6504 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE64D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740010 ID=CK740010; Name=CK740010; organism=Citrus sinensis; type=EST; length=594bp
CTTGGTTGTCAATAAAATGATCTCTGTAAAGAGACCTTGGCAGAAGTTAT
AACTTATGGCTGAAGAAGAAGTGAAGCTCTATGGCACATGGGTAAGCCCT
TTTAGTCGCAGAATCGAGCTTGCACTGAAACTGAAAGGGGTTCCGTTTGA
GTACATAGAAGTAGATCTGTCCAACAAGAGTCCTGAACTTCTGAAATACA
ATCCAATTCACAAGAAAATCCCAGTGCTTGTACACAATGGCAAATCAATT
GTTGAATCTCTAATCATTCTCGAGTACATCGACGACAAATGGAAGAATAA
TCCCATTTTGCCTCGAGATCCTCATCAAAGAGCCGTGGCTCGCTTCTGGG
CTAAGTTCATCGACGAAAAGCTGTTGGCAACAGGAATGAAGGCCAGTTTA
GCTGAAGGGAAGGAGAAAGAGCTGCTGAATGAAGAAATACTTGAGCAGAT
GAAATTGCTGGAGAATGAACTCAATGGAAAAGACTTCTTTGGAGGTGAGG
CGATTGGGCTTGTTGACATTGTTGCAACTGTGGTCGCATTTTGGTTCCCA
ATAAGCCATGAAGTTCTTGGAGTAGAAGTAATCACTCAGGAAAA
back to top