CK740046
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF6_ARATH (Actin-depolymerizing factor 6 OS=Arabidopsis thaliana GN=ADF6 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.896e-52 Identity = 79/108 (73.15%), Postives = 89/108 (82.41%), Query Frame = 1 Query: 103 RYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 RYV+FKID TG P ESY+DF A+LP+NDCRYAVYDFD+VTSENCQKSKIFF AWSPSTS IRAK+LY+TSKD+ REL GIHYEIQATDPTE+DLE L+ Sbjct: 35 RYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGIHYEIQATDPTEVDLEVLR 142 HSP 2 Score: 56.9954 bits (136), Expect = 3.896e-52 Identity = 27/33 (81.82%), Postives = 27/33 (81.82%), Query Frame = 3 Query: 3 SFRGLSRPNATSGMGVADHSKNAFTELQRKKVH 101 SFRGLSRPNA SGMGVAD SK F ELQRKK H Sbjct: 2 SFRGLSRPNAISGMGVADESKTTFLELQRKKTH 34
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF_VITVI (Actin-depolymerizing factor OS=Vitis vinifera PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 9.878e-48 Identity = 92/123 (74.80%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 70 HSRNC----KGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 HS+N K ++ RYVIFKID TGGPAES+++FAAALPENDCRYAVYDFD+VTSENCQKSKIFFIAWSP +SRIRAKMLYATSK+RFRRELDG+HYEIQATDPTEMDLE L+ Sbjct: 17 HSKNTFLELKRKKVHRYVIFKIDEKKKEVVVEKTGGPAESFDEFAAALPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPDSSRIRAKMLYATSKERFRRELDGVHYEIQATDPTEMDLEVLR 139
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF11_ORYSJ (Actin-depolymerizing factor 11 OS=Oryza sativa subsp. japonica GN=ADF11 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 2.886e-46 Identity = 77/108 (71.30%), Postives = 90/108 (83.33%), Query Frame = 1 Query: 103 RYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 RYVIFKID TG ES++DF +LPE+DCRYA+YDFD+VT ENCQKSKIFF+AWSPS SRIRAKMLYATSK+RFRRELDG+HYEIQATDP+E+D+E L+ Sbjct: 34 RYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPESDCRYAIYDFDFVTEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDGVHYEIQATDPSELDIELLR 141 HSP 2 Score: 37.7354 bits (86), Expect = 2.886e-46 Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 3 Query: 18 SRPNATSGMGVADHSKNAFTELQRKKVH 101 SR NA+SG+GVA K F ELQRKK H Sbjct: 6 SRANASSGIGVAAECKQTFLELQRKKSH 33
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF2_ORYSJ (Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 5.766e-44 Identity = 79/108 (73.15%), Postives = 89/108 (82.41%), Query Frame = 1 Query: 103 RYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 RYVIFKI+ TG ESY+DF A+LPENDCRYA+YDFD+VT EN QKSKIFFIAWSPSTSRIRAKMLY+TSKDR ++ELDG HYEIQATDPTE+DLE L+ Sbjct: 34 RYVIFKIEEKQKQVVVEKTGATTESYDDFLASLPENDCRYALYDFDFVTGENVQKSKIFFIAWSPSTSRIRAKMLYSTSKDRIKQELDGFHYEIQATDPTEVDLEVLR 141 HSP 2 Score: 31.5722 bits (70), Expect = 5.766e-44 Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 3 Query: 18 SRPNATSGMGVADHSKNAFTELQRKK 95 S NA+SGMGVA ++ F ELQ KK Sbjct: 6 SHSNASSGMGVAPDIRDTFLELQMKK 31
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.430e-38 Identity = 71/122 (58.20%), Postives = 94/122 (77.05%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELKT 429 K+ K +R R++++KI+ G P ESYEDFAA+LPEN+CRYAVYDFD+VT+ENCQKS+IFFIAW P T+R+R+KM+YA+SKDRF+RELDGI E+QA DPTEM L+ +++ Sbjct: 15 KLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLPENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQS 136
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF10_ORYSJ (Actin-depolymerizing factor 10 OS=Oryza sativa subsp. japonica GN=ADF10 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.439e-38 Identity = 72/114 (63.16%), Postives = 89/114 (78.07%), Query Frame = 1 Query: 85 KGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 K R+ RYVIFKID TG P ESY+DF A+LP +DCRYAVYD D+V+ +NC+KSKIFFI+WSPS SRIRAK +YA S+++FR ELDG+H+EIQATDP +MDLE L+ Sbjct: 32 KRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLPADDCRYAVYDLDFVSDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHFEIQATDPDDMDLEVLR 145
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 4.160e-38 Identity = 71/121 (58.68%), Postives = 91/121 (75.21%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 K+ K +R R+++FKID G P E+YEDF ++PE++CRYAVYD+D+ T ENCQKSKIFFIAWSP TSR+R+KMLYA+SKDRF+RELDGI E+QATDP+EM L+ +K Sbjct: 15 KLKFLELKAKRNYRFIVFKIDEKAQQVMIDKLGNPEETYEDFTRSIPEDECRYAVYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIK 135
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 1.581e-37 Identity = 69/122 (56.56%), Postives = 93/122 (76.23%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELKT 429 K+ K +R R++++KI+ G P +YEDFAA+LP ++CRYA+YDFD+VT+ENCQKSKIFFIAW P +++R+KM+YA+SKDRF+RELDGI E+QATDPTEMDL+ LK+ Sbjct: 15 KLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKS 136
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 2.696e-37 Identity = 69/121 (57.02%), Postives = 92/121 (76.03%), Query Frame = 1 Query: 64 KMHSRNCKGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 K+ K +R R++I+KID G P +Y+DFAA+LP N+CRYA++D+D+VT ENCQKSKIFFIAWSP TSR+R+KM+YA+SKDRF+RELDGI E+QATDPTE+ L+ ++ Sbjct: 15 KLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLPANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIR 135
BLAST of CK740046 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 4.599e-37 Identity = 66/114 (57.89%), Postives = 90/114 (78.95%), Query Frame = 1 Query: 85 KGRRFTRYVIFKIDXXXXXXXXXXTGGPAESYEDFAAALPENDCRYAVYDFDYVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQATDPTEMDLEELK 426 K +R R+++FKID G P E+Y+DF +++P+++CRYAVYDFD+ T +NCQKSKIFFIAWSP TSR+R+KMLYA+SKDRF+RE++GI E+QATDP+EM L+ +K Sbjct: 22 KAKRTYRFIVFKIDEKAQQVQIEKLGNPEETYDDFTSSIPDDECRYAVYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIK 135 The following BLAST results are available for this feature:
BLAST of CK740046 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740046 ID=CK740046; Name=CK740046; organism=Citrus sinensis; type=EST; length=460bpback to top |