CK740066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: RDH11_HUMAN (Retinol dehydrogenase 11 OS=Homo sapiens GN=RDH11 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 1.270e-19 Identity = 56/121 (46.28%), Postives = 77/121 (63.64%), Query Frame = 1 Query: 31 YNRFSAYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 YN AY SKLAN+L T ELARRLK GV T SVHPG + + L R+ SF + L + IK +QGA T+ + AL ++ L+G++F+D +VA S+QA N +A++LWD S DL+ Sbjct: 196 YNAGLAYCHSKLANILFTQELARRLKGSGV--TTYSVHPGTVQSELVRHSSFMRWMWWLFS-FFIKTPQQGAQTSLHCALTEGLEILSGNHFSDCHVAWVSAQARNETIARRLWDVSCDLL 313
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: RDH14_HUMAN (Retinol dehydrogenase 14 OS=Homo sapiens GN=RDH14 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.085e-18 Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 31 YNRFSAYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISF---FSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 YN+ Y +SKLAN+L T ELARRL +G ++T N +HPG + TNL R+I L L+ K +GA T+ Y+A P V+G++G YF D + +A++ +A+KLWD S ++ Sbjct: 211 YNKSFCYSRSKLANILFTRELARRL--EGTNVTVNVLHPGIVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPVEGAQTSIYLASSPEVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMV 332
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: RDH14_MOUSE (Retinol dehydrogenase 14 OS=Mus musculus GN=Rdh14 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 9.100e-18 Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 1 Query: 31 YNRFSAYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISF---FSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 YN+ Y +SKLAN+L T ELARRL +G ++T N +HPG + TNL R+I L L+ K +GA T+ Y+A P V+G++G YF D + +A++ +A+KLWD S ++ Sbjct: 209 YNKSFCYSRSKLANILFTRELARRL--EGTNVTVNVLHPGIVRTNLGRHIHIPLLARPLFNLVSWAFFKTPLEGAQTSIYLACSPDVEGVSGRYFGDCKEEELLPKAMDESVARKLWDISEVMV 330
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: RDH11_MOUSE (Retinol dehydrogenase 11 OS=Mus musculus GN=Rdh11 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.006e-16 Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 1 Query: 31 YNRFSAYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 Y+ AY SKLAN+L T ELA+RLK GV T SVHPG + + L R S L L + IK ++GA T+ Y AL ++ L+GS+F+D +A S Q N +A++LWD S DL+ Sbjct: 193 YSAGLAYCHSKLANILFTKELAKRLKGSGV--TTYSVHPGTVHSELTRYSSIMRWLWQLFFVF-IKTPQEGAQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDLL 310
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: RDH12_MOUSE (Retinol dehydrogenase 12 OS=Mus musculus GN=Rdh12 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.716e-16 Identity = 50/122 (40.98%), Postives = 74/122 (60.66%), Query Frame = 1 Query: 28 RYNRFSAYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 RY AYG SKLAN+L T ELA+RL+ G +TA +VHPG + + + RN S+ L+ L K+ QGA T+ + AL ++ L+G YF+D SS+A N + A++LW+ S +L+ Sbjct: 193 RYCSAFAYGHSKLANLLFTRELAKRLQ--GTGVTAYAVHPGVVLSEITRN-SYLLCLLWRLFSPFFKSTSQGAQTSLHCALAEDLEPLSGKYFSDCKRMWVSSRARNKKTAERLWNVSCELL 311
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: RDH12_HUMAN (Retinol dehydrogenase 12 OS=Homo sapiens GN=RDH12 PE=1 SV=3) HSP 1 Score: 83.9593 bits (206), Expect = 6.522e-16 Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 28 RYNRFSAYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 RY+R AY SKLANVL T ELA+RL+ G +T +VHPG + + L R+ S L L +V K +GA T+ + AL ++ L+G YF+D S +A N + A++LW+ S +L+ Sbjct: 193 RYSRGFAYCHSKLANVLFTRELAKRLQ--GTGVTTYAVHPGVVRSELVRHSSLLCLLWRLFSPFV-KTAREGAQTSLHCALAEGLEPLSGKYFSDCKRTWVSPRARNNKTAERLWNVSCELL 311
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: WWOX_MOUSE (WW domain-containing oxidoreductase OS=Mus musculus GN=Wwox PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.518e-16 Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 1 Query: 46 AYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 AY +SKL N+L +NEL RRL GV T+N+VHPG + + S+ L+ L + K+++QGAATT Y A+ P ++GL G YF + S +A + E A+ LW+ S LI Sbjct: 292 AYNRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSAIHRNSWVYKLLFTLARPFTKSMQQGAATTVYCAVAPELEGLGGMYFNNCCRCLPSEEAQSEETARALWELSERLI 405
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: RDH12_BOVIN (Retinol dehydrogenase 12 OS=Bos taurus GN=RDH12 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.227e-15 Identity = 49/121 (40.50%), Postives = 71/121 (58.68%), Query Frame = 1 Query: 31 YNRFSAYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 YN AY SKLANVL T ELA+RLK G +T +VHPG + + L R+ SF L+ L +K +GA T+ + AL ++ L+G YF+D S +A N + A++LW+ S +L+ Sbjct: 194 YNLGFAYCHSKLANVLFTRELAKRLK--GTGVTTYAVHPGIVRSKLVRH-SFLLCLLWRLFSPFLKTTWEGAQTSLHCALAEGLEPLSGKYFSDCKKTWVSPRARNNKTAERLWNVSCELL 311
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: WWOX_PONAB (WW domain-containing oxidoreductase OS=Pongo abelii GN=WWOX PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.098e-14 Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 46 AYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 AY +SKL NVL +NEL RRL GV T+N+VHPG + + + L+ L + K+++QGAATT Y A P ++GL G YF + S +A + E A+ LW S LI Sbjct: 292 AYNRSKLCNVLFSNELHRRLSPRGV--TSNAVHPGNMMYSNIHRSWWVYTLLFTLARPFTKSMQQGAATTVYCAAAPELEGLGGMYFNNCCRCMPSPEAQSEETARTLWALSERLI 405
BLAST of CK740066 vs. ExPASy Swiss-Prot
Match: WWOX_HUMAN (WW domain-containing oxidoreductase OS=Homo sapiens GN=WWOX PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.579e-14 Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 1 Query: 46 AYGQSKLANVLHTNELARRLKEDGVDITANSVHPGAITTNLFRNISFFSGLVGLLGKYVIKNVEQGAATTCYVALHPHVKGLTGSYFADSNVAQASSQAVNTELAQKLWDFSSDLI 393 AY +SKL N+L +NEL RRL GV T+N+VHPG + + + L+ L + K+++QGAATT Y A P ++GL G YF + S +A + E A+ LW S LI Sbjct: 292 AYNRSKLCNILFSNELHRRLSPRGV--TSNAVHPGNMMYSNIHRSWWVYTLLFTLARPFTKSMQQGAATTVYCAAVPELEGLGGMYFNNCCRCMPSPEAQSEETARTLWALSERLI 405 The following BLAST results are available for this feature:
BLAST of CK740066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740066 ID=CK740066; Name=CK740066; organism=Citrus sinensis; type=EST; length=601bpback to top |