CK740072

Overview
NameCK740072
Unique NameCK740072
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length633
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3393 contig Csv1_Contig3393:1360..1992. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT6_ARATH (Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 3.198e-64
Identity = 110/124 (88.71%), Postives = 116/124 (93.55%), Query Frame = 1
Query:    1 GGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 372
            GGLSFLQFCNLNSFR KFILGFS+F+GLS+PQYFNEYTAI G+GPVHT  RWFNDMVNVPFSSEPFVAG VAFFLDNTLHKKD  +RKDRG+HWWDKF SFKGDTRSEEFYSLPFNLNKYFPSV
Sbjct:  409 GGLSFLQFCNLNSFRTKFILGFSVFLGLSIPQYFNEYTAIKGYGPVHTGARWFNDMVNVPFSSEPFVAGSVAFFLDNTLHKKDSSIRKDRGKHWWDKFRSFKGDTRSEEFYSLPFNLNKYFPSV 532          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT5_ARATH (Nucleobase-ascorbate transporter 5 OS=Arabidopsis thaliana GN=NAT5 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.372e-59
Identity = 99/124 (79.84%), Postives = 111/124 (89.52%), Query Frame = 1
Query:    1 GGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 372
            GGLS LQFCNLNSFR  FILGFSIF+GLS+PQYFNE+TAI G+GPVHT  RWFNDMVNVPFSS+ FV GCVA+ LD TLHKKDG +RKDRG+HWWD+FW+FK D R+EEFY+LPFNLNKYFPSV
Sbjct:  405 GGLSLLQFCNLNSFRTLFILGFSIFLGLSIPQYFNEHTAIKGYGPVHTGARWFNDMVNVPFSSKAFVGGCVAYLLDTTLHKKDGSIRKDRGKHWWDRFWTFKNDPRTEEFYALPFNLNKYFPSV 528          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT7_ARATH (Nucleobase-ascorbate transporter 7 OS=Arabidopsis thaliana GN=NAT7 PE=2 SV=2)

HSP 1 Score: 214.542 bits (545), Expect = 3.544e-55
Identity = 96/124 (77.42%), Postives = 107/124 (86.29%), Query Frame = 1
Query:    1 GGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 372
            GGLS LQFCNLNSFR KFILGFS+F+GLS+PQYFN+YTA+N +GPVHT  RWFNDM+NVPFSS+ FVAG +AFFLD T+  KD   RKDRG  WWD+F SFK DTRSEEFYSLPFNLNKYFPSV
Sbjct:  415 GGLSLLQFCNLNSFRTKFILGFSVFMGLSIPQYFNQYTAVNKYGPVHTHARWFNDMINVPFSSKAFVAGILAFFLDVTMSSKDSATRKDRGMFWWDRFMSFKSDTRSEEFYSLPFNLNKYFPSV 538          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT8_ARATH (Nucleobase-ascorbate transporter 8 OS=Arabidopsis thaliana GN=NAT8 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 5.130e-46
Identity = 83/123 (67.48%), Postives = 99/123 (80.49%), Query Frame = 1
Query:    1 GGLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 369
            GGLS +QFCNLNSFR KFILGFSIF+GLS+PQYF +YT +  +GPV TS  WFN+++NVPFSS+ FV+G +AFFLD TL  KD   +KDRG  WW +F SF+ D RSEEFYSLP NL+KYFPS
Sbjct:  416 GGLSLIQFCNLNSFRTKFILGFSIFMGLSIPQYFYQYTTLETYGPVRTSATWFNNIINVPFSSKAFVSGILAFFLDTTLPPKDKTTKKDRGLVWWKRFKSFQSDNRSEEFYSLPLNLSKYFPS 538          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT4_ARATH (Nucleobase-ascorbate transporter 4 OS=Arabidopsis thaliana GN=NAT4 PE=2 SV=2)

HSP 1 Score: 150.214 bits (378), Expect = 8.209e-36
Identity = 75/122 (61.48%), Postives = 86/122 (70.49%), Query Frame = 1
Query:    4 GLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 369
            GL  LQFCNLNSFR KFILGFSIFIGLSV QYF EY  I+G GPVHT    FN ++ V FSS   V    AF LD T       VR+D GRHWW+KF  +  DTR+EEFY+LP+NLN++FPS
Sbjct:  404 GLGLLQFCNLNSFRNKFILGFSIFIGLSVAQYFTEYLFISGRGPVHTRTSAFNVIMQVIFSSAATVGIMAAFLLDCTHSYGHASVRRDSGRHWWEKFRVYHTDTRTEEFYALPYNLNRFFPS 525          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT2_ARATH (Nucleobase-ascorbate transporter 2 OS=Arabidopsis thaliana GN=NAT2 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 9.076e-35
Identity = 69/121 (57.02%), Postives = 88/121 (72.73%), Query Frame = 1
Query:    4 GLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 366
            GLSFLQF N+NS R  FI+G S+F+GLS+P+YF +++     GP HT+  WFND +N  F S P VA  VA FLDNTL  K  +  +DRG  WW KF +FKGD+R+EEFY+LPFNLN++FP
Sbjct:  404 GLSFLQFTNMNSLRNLFIVGVSLFLGLSIPEYFRDFSMKALHGPAHTNAGWFNDFLNTIFLSSPMVALMVAVFLDNTLDYK--ETARDRGLPWWAKFRTFKGDSRNEEFYTLPFNLNRFFP 522          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: LPE1_MAIZE (Nucleobase-ascorbate transporter LPE1 OS=Zea mays GN=LPE1 PE=1 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.641e-34
Identity = 71/123 (57.72%), Postives = 85/123 (69.11%), Query Frame = 1
Query:    4 GLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 372
            G S LQ+CNLNS R KFIL  S+F+GLS+PQYF  Y    GFGPVHT    FN MVNV FSS   VA  +A+ LD T    +  V+KDRG  WW+KF S+K D RSEEFY LP+ L++YFPS+
Sbjct:  405 GFSLLQYCNLNSLRTKFILSISLFLGLSIPQYFRVYEMFFGFGPVHTHSVAFNVMVNVIFSSPATVAAILAYLLDCTHLYWEASVKKDRGWFWWEKFKSYKYDGRSEEFYRLPYGLSRYFPSL 527          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT1_ARATH (Nucleobase-ascorbate transporter 1 OS=Arabidopsis thaliana GN=NAT1 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.021e-30
Identity = 61/121 (50.41%), Postives = 83/121 (68.60%), Query Frame = 1
Query:    4 GLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFP 366
            GLSFLQF N+NS R   I G S+F+G+S+PQ+F +Y     +G VHT+  WFN  +N  F S   V   +A F+DNT+  +  + +KDRG  WW KF +F+GD R+EEFY+LPFNLN++FP
Sbjct:  400 GLSFLQFTNMNSMRNLMITGLSLFLGISIPQFFAQYWDARHYGLVHTNAGWFNAFLNTLFMSPATVGLIIAVFMDNTMEVE--RSKKDRGMPWWVKFRTFRGDNRNEEFYTLPFNLNRFFP 518          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT10_ARATH (Putative nucleobase-ascorbate transporter 10 OS=Arabidopsis thaliana GN=NAT10 PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.790e-30
Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 1
Query:    4 GLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 369
            GLS+LQFCNLNSF +KFILGFS F+ +S+PQYF EY   NG         W  DM+ V F S   VA  +A  LD TL +   + +KD G  WWDKF  +  D R++EFY LP  LNK+FPS
Sbjct:  421 GLSYLQFCNLNSFNIKFILGFSFFMAISIPQYFREY--YNGGWRSDHHSNWLEDMIRVIFMSHTTVAAIIAIVLDCTLCRDSDEAKKDCGMKWWDKFRLYNLDVRNDEFYGLPCRLNKFFPS 540          
BLAST of CK740072 vs. ExPASy Swiss-Prot
Match: NAT3_ARATH (Nucleobase-ascorbate transporter 3 OS=Arabidopsis thaliana GN=NAT3 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 4.992e-25
Identity = 54/122 (44.26%), Postives = 77/122 (63.11%), Query Frame = 1
Query:    4 GLSFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPS 369
            G+SF+QF + NS R  +++G S+F+ LS+ QYF   T+  G+GPV T+G WFND++N  F+S P VA  +A  LDNTL  +       RG  WW  F    GD R++EFYS+P  +N+  P+
Sbjct:  428 GISFIQFTDTNSMRNMYVIGVSLFLSLSIAQYFLANTSRAGYGPVRTAGGWFNDILNTIFASAPLVATILATILDNTLEARHAS-DDARGIPWWKPFQHRNGDGRNDEFYSMPLRINELMPT 548          
The following BLAST results are available for this feature:
BLAST of CK740072 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
NAT6_ARATH3.198e-6488.71Nucleobase-ascorbate transporter 6 OS=Arabidopsis ... [more]
NAT5_ARATH2.372e-5979.84Nucleobase-ascorbate transporter 5 OS=Arabidopsis ... [more]
NAT7_ARATH3.544e-5577.42Nucleobase-ascorbate transporter 7 OS=Arabidopsis ... [more]
NAT8_ARATH5.130e-4667.48Nucleobase-ascorbate transporter 8 OS=Arabidopsis ... [more]
NAT4_ARATH8.209e-3661.48Nucleobase-ascorbate transporter 4 OS=Arabidopsis ... [more]
NAT2_ARATH9.076e-3557.02Nucleobase-ascorbate transporter 2 OS=Arabidopsis ... [more]
LPE1_MAIZE2.641e-3457.72Nucleobase-ascorbate transporter LPE1 OS=Zea mays ... [more]
NAT1_ARATH3.021e-3050.41Nucleobase-ascorbate transporter 1 OS=Arabidopsis ... [more]
NAT10_ARATH8.790e-3051.64Putative nucleobase-ascorbate transporter 10 OS=Ar... [more]
NAT3_ARATH4.992e-2544.26Nucleobase-ascorbate transporter 3 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6566 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740072 ID=CK740072; Name=CK740072; organism=Citrus sinensis; type=EST; length=633bp
GGAGGTCTTAGCTTCCTTCAGTTCTGTAACCTCAACAGTTTCCGAGTAAA
GTTCATATTAGGCTTCTCTATCTTCATCGGTCTGTCTGTGCCCCAATACT
TCAACGAGTACACTGCCATTAATGGTTTCGGTCCAGTTCACACTAGTGGA
AGATGGTTCAACGATATGGTAAACGTTCCTTTCTCCTCAGAACCATTTGT
TGCTGGTTGTGTGGCATTTTTCCTTGACAACACACTGCATAAAAAGGATG
GTCAAGTCAGGAAAGACAGGGGTAGGCATTGGTGGGACAAGTTCTGGTCC
TTCAAAGGCGACACAAGAAGTGAAGAATTTTACTCCCTGCCCTTCAATTT
AAACAAATATTTCCCATCTGTGTGATTCAATCGGTAACATGTATTTCTCT
TTGGGAAGTTTTCCAAAAGTCCTTGTGGGAACACACAAAATATCATCATT
GCTCTCTTGTGAATCTCTTATTACACGCTATAGCAGTAAAAGATAGTACC
TTCCTTTATAGGATGTGCCTTAGAGCATTTGTTGAACTGGTTTTTTCTTT
TCTGTAAATCCAACCGGAGACTGATGGATTCGAAGTAGCAATGAAGCAAT
TATATTTGCTTTTTCTTCAAAAAAAAAAAAAAA
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