CK740076

Overview
NameCK740076
Unique NameCK740076
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length718
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: Y1461_ARATH (Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana GN=At1g54610 PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 3.554e-68
Identity = 109/163 (66.87%), Postives = 133/163 (81.60%), Query Frame = 1
Query:  166 FKPQQPYKRCIAETFKDFPSSSLPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPPSKEMDVKLREEEARRQRGLSGKANAVDGAKRVRHRDRAGRAIPAPEANAEIQTNLDRWRVVTQANAKSKSEKFPPPHQDAG-VGHPQNASRKAPVSF 651
            +KP++PYKR I ETFKDFP SSLPLI+ LLSI+P++R TA+AAL SEFF +EPYACEP+ LPKYPPSKE+D K R+EE RRQR  S KA   DGA++ RHRDR+ RA+PAPEANAE+Q+N+DR R++T ANAKSKSEKFPPPHQD G +G P  AS+    +F
Sbjct:  354 YKPREPYKRSIRETFKDFPPSSLPLIDALLSIEPEDRQTASAALKSEFFTSEPYACEPADLPKYPPSKEIDAKRRDEETRRQRAAS-KAQG-DGARKNRHRDRSNRALPAPEANAELQSNVDRRRLITHANAKSKSEKFPPPHQDGGAMGVPLGASQHIDPTF 514          

HSP 2 Score: 60.4622 bits (145), Expect = 3.554e-68
Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 3
Query:    9 YGVLVAFWQS-CLLASQ*C-----LGGTEVEQLHKIFKLCGSPSEEYWKKSKLPNATLFQ 170
            YGV +  W + C+LA          G TEVEQLHKI+KLCGSPSE+YWKK K  +  +++
Sbjct:  296 YGVGIDLWSAGCILAELLAGRPIMPGRTEVEQLHKIYKLCGSPSEDYWKKGKFTHGAIYK 355          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: CDKC1_ARATH (Cyclin-dependent kinase C-1 OS=Arabidopsis thaliana GN=CDKC-1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.810e-23
Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 1
Query:  166 FKPQQPYKRCIAETFKDFPSSSLPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPPSKEMDVKLREEEARR 408
            FKP +P KR + E F+ F   +L L+E +L +DP  R +A  AL++E+F T+P  C+P SLP Y  S E   K + ++ R+
Sbjct:  277 FKPARPLKRRVREFFRHFDRHALELLEKMLVLDPAQRISAKDALDAEYFWTDPLPCDPKSLPTYESSHEFQTKKKRQQQRQ 357          

HSP 2 Score: 41.2022 bits (95), Expect = 1.810e-23
Identity = 16/24 (66.67%), Postives = 20/24 (83.33%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPIMPGRD 73
            ID+WS GCI AELL  KPI+PG++
Sbjct:  222 IDMWSVGCIFAELLHAKPILPGKN 245          

HSP 3 Score: 38.1206 bits (87), Expect = 1.810e-23
Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 3
Query:   66 GGTEVEQLHKIFKLCGSPSEEYWK-KSKLP 152
            G  E EQL+KIF+LCGSP E+ W   SK+P
Sbjct:  243 GKNEQEQLNKIFELCGSPDEKLWPGVSKMP 272          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: CDKC2_ARATH (Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 3.156e-22
Identity = 31/87 (35.63%), Postives = 48/87 (55.17%), Query Frame = 1
Query:  169 KPQQPYKRCIAETFKDFPSSSLPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPPSKEMDVKLREEEARRQRGLSGK 429
            K  +P KR + E ++ F   +L L+E +L +DP  R  A  AL++E+F T+P  C+P SLP Y  S E   K + ++ R     + K
Sbjct:  278 KSSRPLKRRVREIYRHFDRHALELLEKMLVLDPSQRICAKDALDAEYFWTDPLPCDPKSLPTYESSHEFQTKKKRQQMRHNEEAAKK 364          

HSP 2 Score: 43.1282 bits (100), Expect = 3.156e-22
Identity = 17/23 (73.91%), Postives = 20/23 (86.96%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPIMPGR 70
            ID+WS GCI AELL GKPI+PG+
Sbjct:  222 IDMWSVGCIFAELLNGKPILPGK 244          

HSP 3 Score: 37.7354 bits (86), Expect = 3.156e-22
Identity = 18/30 (60.00%), Postives = 22/30 (73.33%), Query Frame = 3
Query:   66 GGTEVEQLHKIFKLCGSPSEEYWK-KSKLP 152
            G TE EQL+KI++LCGSP E  W   SK+P
Sbjct:  243 GKTENEQLNKIYELCGSPDESNWPGVSKMP 272          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: CDKC2_ORYSJ (Cyclin-dependent kinase C-2 OS=Oryza sativa subsp. japonica GN=CDKC-2 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.744e-20
Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 1
Query:  166 FKPQQPYKRCIAETFKDFPSSSLPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPPSKEMDVKLREEEARR 408
            FKPQ+P KR + E+FK F   +L L+E +L++DP  R +A  AL++E+F T+P  C+P SLPKY  S E   K + ++ R+
Sbjct:  277 FKPQRPMKRRVKESFKHFDQHALDLLEKMLTLDPSQRISAKDALDAEYFWTDPLPCDPKSLPKYEASHEFQTKKKRQQQRQ 357          

HSP 2 Score: 40.0466 bits (92), Expect = 1.744e-20
Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPIMPGRD 73
            +D+WS GCI AELL GKPI+ G++
Sbjct:  222 VDMWSVGCIFAELLNGKPILTGKN 245          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.167e-18
Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 1
Query:  166 FKPQQPYKRCIAETFKDFPSSSLPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPPSKEMDVKLREEEARRQRGLSGKANAVDGAKRVRHRDRAGRAIP 492
            FKP +  KR + E FK F   +L L+E +L++DP  R +A  AL++E+F ++P  C+P SLPKY  S E   K + ++ R       +A+     ++ +H    GR  P
Sbjct:  277 FKPPRQLKRRVKEYFKHFDRLALDLLEKMLTLDPAQRISAQDALDAEYFWSDPLPCDPKSLPKYESSHEFQTKKKRQQMR-------QADEAAKRQKTQHPQPHGRLPP 378          

HSP 2 Score: 43.1282 bits (100), Expect = 1.167e-18
Identity = 16/24 (66.67%), Postives = 21/24 (87.50%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPIMPGRD 73
            +D+WS GCI AELL GKPI+PG++
Sbjct:  222 VDMWSVGCIFAELLNGKPILPGKN 245          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: CDK9_SCHPO (Serine/threonine-protein kinase cdk9 OS=Schizosaccharomyces pombe GN=cdk9 PE=1 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 1.774e-14
Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 1
Query:  142 PSCQMQHFFKPQQPYKRCIAETFKDFPSSSLPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPPSKEMDVKLREEE 399
            P C+    F P  P  R +   F  F      L   +L+++PD R +A+ AL  E+F T PY   PS L  Y  S E D + + E+
Sbjct:  286 PGCEGVRSF-PSHP--RTLETAFFTFGKEMTSLCGAILTLNPDERLSASMALEHEYFTTPPYPANPSELQSYSASHEYDKRRKREQ 368          

HSP 2 Score: 36.5798 bits (83), Expect = 1.774e-14
Identity = 13/22 (59.09%), Postives = 18/22 (81.82%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPIMPG 67
            ID+WS GCI+AE+  G+PI+ G
Sbjct:  236 IDMWSVGCIMAEMYKGRPILQG 257          

HSP 3 Score: 31.5722 bits (70), Expect = 1.774e-14
Identity = 11/20 (55.00%), Postives = 18/20 (90.00%), Query Frame = 3
Query:   66 GGTEVEQLHKIFKLCGSPSE 125
            G ++++QL KIF+LCGSP++
Sbjct:  257 GSSDLDQLDKIFRLCGSPTQ 276          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: BUR1_CANGA (Serine/threonine-protein kinase BUR1 OS=Candida glabrata GN=BUR1 PE=3 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 3.859e-13
Identity = 49/155 (31.61%), Postives = 72/155 (46.45%), Query Frame = 1
Query:  184 YKRCIAETF-KDFPSSSLPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPPSKEMDVKLREE---EARRQRGLSGKANAVDGAKRVRHRDRAGRAIPAPEANAEIQTNLDRWRVVTQANAKS-----KSEKFPPPHQDAGVGHPQ 621
            YK  I E F K    + L  ++ LL++DP  R TA +A+   FF  EP A +  +LP    S E D+K  +E   EA  Q+G S     +              A P+P A  E ++ + R +   Q+N K+     K +KF   +Q+  V HPQ
Sbjct:  335 YKSTIDERFGKHLTPTGLSFLKGLLALDPYKRLTAMSAMKHPFFQEEPLAADRLTLP-CEESHEADIKRYKEELHEAMSQKGPSAPPGHIK------------EATPSP-AKFEKKSGIKREQPY-QSNQKNDQYPIKRQKF---NQNPSVPHPQ 471          

HSP 2 Score: 35.4242 bits (80), Expect = 3.859e-13
Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 3
Query:   66 GGTEVEQLHKIFKLCGSPSEEYWKKSK-LPNATL 164
            G T+++Q H IFKL G+P E  W+ +K LP A L
Sbjct:  297 GKTDIDQGHVIFKLMGTPDERTWELAKYLPGAEL 330          

HSP 3 Score: 31.9574 bits (71), Expect = 3.859e-13
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPIMPGR 70
            +D+W  GC+ AE    KPI+ G+
Sbjct:  276 VDIWGVGCVFAEFFEKKPILQGK 298          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: Y8487_DICDI (Probable cyclin-dependent serine/threonine-protein kinase DDB_G0278487 OS=Dictyostelium discoideum GN=DDB_G0278487 PE=2 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 4.999e-13
Identity = 26/90 (28.89%), Postives = 46/90 (51.11%), Query Frame = 1
Query:  184 YKRCIAETFKDFPSSSLPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPP-------------SKEMDVKLREEEARRQR 414
            Y   +   FK+F +  + L+E LL+++P  R TA  AL S FF   P   +P ++P Y P              +E++ + ++EE ++Q+
Sbjct:  301 YPSRLRTVFKNFSNDFIELLEGLLTLNPKKRLTAEQALQSPFFTNHPLPFKPENMPGYQPIHVLEAVQKRVQQQQELEQQKKQEEQKKQQ 390          

HSP 2 Score: 32.7278 bits (73), Expect = 4.999e-13
Identity = 15/31 (48.39%), Postives = 21/31 (67.74%), Query Frame = 3
Query:   66 GGTEVEQLHKIFKLCGSPSEEYWKK-SKLPN 155
            G +E +QL  I KLCG+P++E W   S+L N
Sbjct:  261 GSSEQQQLEAICKLCGTPTDEIWPNVSQLQN 291          

HSP 3 Score: 32.3426 bits (72), Expect = 4.999e-13
Identity = 11/22 (50.00%), Postives = 16/22 (72.73%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPIMPG 67
            ID+WS GC+L EL+  +  +PG
Sbjct:  240 IDMWSIGCVLIELVTSRNFLPG 261          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: CDK13_HUMAN (Cell division protein kinase 13 OS=Homo sapiens GN=CDK13 PE=1 SV=2)

HSP 1 Score: 51.6026 bits (122), Expect = 2.242e-11
Identity = 29/97 (29.90%), Postives = 51/97 (52.58%), Query Frame = 1
Query:  169 KPQQPYKRCIAETFKDFPSSSLPLIETLLSIDPDNRGTATAALNSEFF-NTEPYACEPSSLPKYPPSKEMDVKLREEEARRQRGLSGKANAVDGAKR 456
            KP++ Y+R + E F   P+++L L + +L++DP  R TA  AL  EF  + EP    P  LP +    E+  K R  +  +Q G++   + +   ++
Sbjct:  951 KPKKQYRRKLREEFVFIPAAALDLFDYMLALDPSKRCTAEQALQCEFLRDVEPSKMPPPDLPLWQDCHELWSKKRRRQ--KQMGMTDDVSTIKAPRK 1045          

HSP 2 Score: 32.3426 bits (72), Expect = 2.242e-11
Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPI 58
            ID+WS GCIL EL   KPI
Sbjct:  895 IDVWSCGCILGELFTKKPI 913          

HSP 3 Score: 24.2534 bits (51), Expect = 2.242e-11
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 3
Query:   75 EVEQLHKIFKLCGSPSEEYW 134
            E+ QL  I ++CGSP    W
Sbjct:  919 ELAQLELISRICGSPCPAVW 938          
BLAST of CK740076 vs. ExPASy Swiss-Prot
Match: BUR1_YEAST (Serine/threonine-protein kinase BUR1 OS=Saccharomyces cerevisiae GN=SGV1 PE=1 SV=1)

HSP 1 Score: 40.817 bits (94), Expect = 2.332e-11
Identity = 47/176 (26.70%), Postives = 69/176 (39.20%), Query Frame = 1
Query:  184 YKRCIAETFKDFPSSS-LPLIETLLSIDPDNRGTATAALNSEFFNTEPYACEPSSLPKYPPSKEMDVKLREEEARR---------------QRGLSGKANAVDGAKRVRHRDRAG--------RAIPAPEANAEIQTNLDRWRVVTQANAKSKSEKFPPPHQDAGVGH--PQNASR 633
            YK  + E F  + S + L  +  LL++DP  R TA +A +  +F  +P   E  +LP    S E D+K  +EE  +               ++G S     +    R   +D A          A P P    E+  N   + V    N+       PPP   AGV    P N+SR
Sbjct:  323 YKPTLRERFGKYLSETGLDFLGQLLALDPYKRLTAMSAKHHPWFKEDPLPSEKITLPT-EESHEADIKRYKEEMHQSLSQRVPTAPRGHIVEKGESPVVKNLGAIPRGPKKDDASFLPPSKNVLAKPPPSKIRELHQNPRPYHV----NSGYAKTAIPPPAAPAGVNRYGPNNSSR 493          

HSP 2 Score: 35.4242 bits (80), Expect = 2.332e-11
Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 3
Query:   66 GGTEVEQLHKIFKLCGSPSEEYWKKSK-LPNATL 164
            G T+++Q H IFKL G+P+EE W  ++ LP A L
Sbjct:  285 GKTDIDQGHVIFKLLGTPTEEDWAVARYLPGAEL 318          

HSP 3 Score: 31.9574 bits (71), Expect = 2.332e-11
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:    2 IDLWSAGCILAELLAGKPIMPGR 70
            +D+W  GC+ AE    KPI+ G+
Sbjct:  264 VDIWGVGCVFAEFFEKKPILQGK 286          
The following BLAST results are available for this feature:
BLAST of CK740076 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
Y1461_ARATH3.554e-6866.87Probable serine/threonine-protein kinase At1g54610... [more]
CDKC1_ARATH1.810e-2340.74Cyclin-dependent kinase C-1 OS=Arabidopsis thalian... [more]
CDKC2_ARATH3.156e-2235.63Cyclin-dependent kinase C-2 OS=Arabidopsis thalian... [more]
CDKC2_ORYSJ1.744e-2044.44Cyclin-dependent kinase C-2 OS=Oryza sativa subsp.... [more]
CDKC1_ORYSJ1.167e-1834.86Cyclin-dependent kinase C-1 OS=Oryza sativa subsp.... [more]
CDK9_SCHPO1.774e-1433.72Serine/threonine-protein kinase cdk9 OS=Schizosacc... [more]
BUR1_CANGA3.859e-1331.61Serine/threonine-protein kinase BUR1 OS=Candida gl... [more]
Y8487_DICDI4.999e-1328.89Probable cyclin-dependent serine/threonine-protein... [more]
CDK13_HUMAN2.242e-1129.90Cell division protein kinase 13 OS=Homo sapiens GN... [more]
BUR1_YEAST2.332e-1126.70Serine/threonine-protein kinase BUR1 OS=Saccharomy... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6570 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740076 ID=CK740076; Name=CK740076; organism=Citrus sinensis; type=EST; length=718bp
GATTGACCTATGGAGTGCTGGTTGCATTTTGGCAGAGTTGCTTGCTGGCA
AGCCAATAATGCCTGGGCGGGACTGAGGTTGAACAACTCCACAAGATTTT
TAAGTTATGTGGCTCCCCATCAGAAGAATATTGGAAGAAATCCAAGTTGC
CAAATGCAACACTTTTTCAAGCCACAGCAGCCATACAAACGCTGTATTGC
TGAAACTTTCAAAGATTTCCCATCTTCATCCCTTCCTCTAATTGAAACTC
TTCTTTCAATAGATCCTGATAATCGAGGCACTGCTACTGCAGCTTTAAAT
AGTGAATTTTTTAATACCGAACCTTATGCTTGTGAGCCATCAAGTTTACC
CAAGTATCCTCCCAGCAAAGAAATGGATGTAAAGTTAAGAGAAGAAGAAG
CAAGAAGGCAAAGAGGTTTAAGCGGGAAAGCTAATGCAGTCGACGGCGCC
AAAAGAGTTCGACATCGTGATCGTGCTGGTCGGGCTATTCCTGCTCCAGA
GGCCAATGCAGAGATTCAAACAAACTTAGATAGGTGGAGAGTGGTGACAC
AAGCAAATGCAAAGAGCAAGAGTGAGAAATTTCCTCCTCCCCATCAGGAT
GCAGGTGTTGGGCACCCGCAAAATGCATCGCGTAAAGCACCTGTGTCATT
TGGAGCACCAGATAGTTTTGTTAGCTCATCGACTTACGATACAAAATCAT
CAGGATCTGCCAAAAGTG
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