CK740081

Overview
NameCK740081
Unique NameCK740081
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length666
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7569 contig Csv1_Contig7569:66..733. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 5.662e-20
Identity = 49/106 (46.23%), Postives = 65/106 (61.32%), Query Frame = 1
Query:  178 HMDPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFG 495
            H DP+  +FF  KDL  G+TM ++F     +A  + LPR EAD++PFS +++P +L  FS    S  A  M  TL  CE PP +GE K CATSLESM+DF   + G
Sbjct:  205 HDDPNVALFFLEKDLHPGKTMAVHFTAT--TAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAPPAQGERKACATSLESMVDFATSSLG 308          

HSP 2 Score: 25.7942 bits (55), Expect = 5.662e-20
Identity = 12/33 (36.36%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  560 YTILQVPKPMGA---PKMVAWHIMPYPYAIFYC 649
            YT+  V +        ++VA H  PY YA+F C
Sbjct:  329 YTVTAVKRAAAGGDQDQLVACHAEPYAYAVFAC 361          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.711e-18
Identity = 46/106 (43.40%), Postives = 63/106 (59.43%), Query Frame = 1
Query:  184 DPSTMVFFTLKDLKIGETM--PIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFG 495
            DP   +FF  K+L+ G+ +   ++F     +   + LPR +ADSIPFS K+LP +L  F     S  A  M  TL  CE+P  +GE K CATSLES++DFV  +FG
Sbjct:  357 DPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELPANKGEKKACATSLESIVDFVTSSFG 462          

HSP 2 Score: 31.187 bits (69), Expect = 1.711e-18
Identity = 12/31 (38.71%), Postives = 19/31 (61.29%), Query Frame = 2
Query:  557 NYTILQVPKPMGAPKMVAWHIMPYPYAIFYC 649
            +YT+  V +  G  +++A H   YPYA+F C
Sbjct:  486 DYTVSGVRRMAGTGQLIACHPESYPYAVFMC 516          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: RAF1B_WHEAT (Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.249e-18
Identity = 42/102 (41.18%), Postives = 61/102 (59.80%), Query Frame = 1
Query:  190 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFG 495
            +T VFF  + +++G  +P +F    P+A    LPR+ ADS+PF+   LP +L  F  + DS    +ME TL  CE P I GE+K CATSLE++++   G  G
Sbjct:  138 TTTVFFHEEAVRVGRRLPFHFPPATPAALG-FLPRQVADSVPFTTAALPGILATFGIASDSTTVPSMEATLRACESPTIAGESKFCATSLEALVERAMGVLG 238          

HSP 2 Score: 30.0314 bits (66), Expect = 2.249e-18
Identity = 12/30 (40.00%), Postives = 16/30 (53.33%), Query Frame = 2
Query:  560 YTILQVPKPMGAPKMVAWHIMPYPYAIFYC 649
            YT++ V    G P  VA H   YPY ++ C
Sbjct:  259 YTVVAVQPVEGGPVFVACHDEAYPYTVYRC 288          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 4.082e-17
Identity = 46/104 (44.23%), Postives = 57/104 (54.81%), Query Frame = 1
Query:  184 DPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFG 495
            D    VFF  KDL  G  M ++F +    A    LPR  ADS+PF+ ++LP +L   S    SP A AM  TL  CE  P  GE K CATSLESM++F   + G
Sbjct:   22 DTVNNVFFLEKDLFPGSKMTLHFTRATAGA--ALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECEAAPQAGEAKRCATSLESMVEFAASSLG 123          

HSP 2 Score: 28.1054 bits (61), Expect = 4.082e-17
Identity = 12/24 (50.00%), Postives = 14/24 (58.33%), Query Frame = 2
Query:  578 PKPMGAPKMVAWHIMPYPYAIFYC 649
            P P+    MVA H M Y YA+F C
Sbjct:  152 PVPVSGGDMVACHGMAYAYAVFGC 175          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: RAF1A_WHEAT (Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.150e-16
Identity = 40/95 (42.11%), Postives = 59/95 (62.11%), Query Frame = 1
Query:  190 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLD 474
            +T VFF  + +++G+ +P  F    P+A    LPR+ ADS+PF+   LP +L  F  + DS    +ME TL  CE P I GE+K CATSLE++++
Sbjct:  165 TTTVFFHEEAVRVGKRLPFRFPPATPAALG-FLPRQVADSVPFTTAALPGVLATFGVASDSATVASMEATLRACESPTIAGESKFCATSLEALVE 258          

HSP 2 Score: 28.8758 bits (63), Expect = 1.150e-16
Identity = 12/30 (40.00%), Postives = 15/30 (50.00%), Query Frame = 2
Query:  560 YTILQVPKPMGAPKMVAWHIMPYPYAIFYC 649
            YT+  V    G P  VA H   YPY ++ C
Sbjct:  286 YTVRSVRPVEGGPVFVACHDEAYPYTVYRC 315          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.661e-15
Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 1
Query:  184 DPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFG 495
            DP+  +FF   +L+  +++ ++F      A  + LPR EAD++PFS K L  +L  F     S  A  ++ TL  CE+P  +GE K CATSLESM+DFV  + G
Sbjct:  103 DPTMGLFFLETNLQSSKSIKLHFANM--MAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELPANKGEKKACATSLESMVDFVASSLG 204          

HSP 2 Score: 26.5646 bits (57), Expect = 7.661e-15
Identity = 10/30 (33.33%), Postives = 16/30 (53.33%), Query Frame = 2
Query:  560 YTILQVPKPMGAPKMVAWHIMPYPYAIFYC 649
            YT+    +     +++A H   YPYA+F C
Sbjct:  227 YTVTGARRMAETGQLIACHPESYPYAVFMC 256          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.807e-14
Identity = 44/104 (42.31%), Postives = 55/104 (52.88%), Query Frame = 1
Query:  199 VFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGET-----KICATSLESMLDFVHGTFG 495
            VFF  KDL  G  M ++F +    A    LPR  ADS+PF+ ++LP +L   S    SP A AM  TL  CE   I  ET       CATSLESM++ V  + G
Sbjct:   66 VFFLEKDLFPGSKMTLHFTRATAGA--ALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCEAARIASETAPKHKHYCATSLESMVELVASSLG 167          

HSP 2 Score: 28.4906 bits (62), Expect = 4.807e-14
Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  578 PKPMGAPKMVAWHIMPYPYAIF 643
            P P+    MVA H MPY YA+F
Sbjct:  197 PVPVPGGDMVACHRMPYAYAVF 218          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.817e-14
Identity = 44/103 (42.72%), Postives = 57/103 (55.34%), Query Frame = 1
Query:  199 VFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGET----KICATSLESMLDFVHGTFG 495
            VFF  KDL  G  M ++F +    A    LPR  A+S+PF+ ++LP +L   S    SP A AM  TL  CE   + GET      CATSLESM++FV  + G
Sbjct:   64 VFFLEKDLFPGSKMTLHFTRATAGA--ALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECEAARLAGETTKHKHYCATSLESMVEFVASSLG 164          

HSP 2 Score: 26.5646 bits (57), Expect = 4.817e-14
Identity = 12/27 (44.44%), Postives = 17/27 (62.96%), Query Frame = 2
Query:  569 LQVPKPMGAP--KMVAWHIMPYPYAIF 643
            ++  +P+  P   MVA H MPY YA+F
Sbjct:  189 VEAVRPVAVPGGDMVACHGMPYAYAVF 215          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: BURPD_ORYSJ (BURP domain-containing protein 13 OS=Oryza sativa subsp. japonica GN=BURP13 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 9.683e-14
Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 1
Query:  190 STMVFFTLKDLKIGETMPIYFRKRDPSAYPQALPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFG 495
            +T VFF  + +++GE +P YF     SA    LPR  ADSIPF+   LP +L  F  + D+  A  M  TL  CE P + GE+K CATSLE++++      G
Sbjct:  186 TTTVFFHEEAVRVGERLPFYFPAATTSALG-FLPRRVADSIPFTAAALPAVLALFGVAPDTAEAAGMRETLRTCEWPTLAGESKFCATSLEALVEGAMAALG 286          
BLAST of CK740081 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.265e-13
Identity = 50/149 (33.56%), Postives = 73/149 (48.99%), Query Frame = 1
Query:  178 HMDPSTMVFFTLKDLKIGETMPIYFRKRDPSAYPQA-LPREEADSIPFSLKQLPYLLQFFSFSDDSPLAKAMEGTLNHCEVPPIEGETKICATSLESMLDFVHGTFGLETKFRVLAQNFSQNQLPFSKLHYFTSA*TNGCSQDGGMAYH 621
            H DP+  +FF  KDL  G+ M + F   D      A LPR EA+++PF  ++    L+ FS    S  A+ M+ T+  CE   + GE K CATSLESM+DF     G +   R ++   ++   P  K +   +A     S D  +  H
Sbjct:  168 HDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECEARKVSGEEKYCATSLESMVDFSVSKLG-KYHVRAVSTEVAKKNAPMQK-YKIAAAGVKKLSDDKSVVCH 314          
The following BLAST results are available for this feature:
BLAST of CK740081 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
BURP3_ORYSJ5.662e-2046.23BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURPH_ORYSJ1.711e-1843.40BURP domain-containing protein 17 OS=Oryza sativa ... [more]
RAF1B_WHEAT2.249e-1841.18Protein RAFTIN 1B OS=Triticum aestivum GN=RAFTIN1B... [more]
BURP6_ORYSJ4.082e-1744.23BURP domain-containing protein 6 OS=Oryza sativa s... [more]
RAF1A_WHEAT1.150e-1642.11Protein RAFTIN 1A OS=Triticum aestivum GN=RAFTIN1A... [more]
BURP5_ORYSJ7.661e-1540.38BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURP2_ORYSJ4.807e-1442.31BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP1_ORYSJ4.817e-1442.72BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURPD_ORYSJ9.683e-1441.18BURP domain-containing protein 13 OS=Oryza sativa ... [more]
RD22_ARATH1.265e-1333.56Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6575 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740081 ID=CK740081; Name=CK740081; organism=Citrus sinensis; type=EST; length=666bp
CTCCCTTAAAAAAAAAACAAAAAAAGATTACTAAAATACATAAGAAACTT
CGATAATAGAAAAGAGATGGGGTTAAGATTTTCAGTTTGGAACCTCCTTC
TTTCTCTACTCTTTCTGTGTGCTCAGGTGCTTTCGGAGAATCTTCATGAT
TCTCATTCAATACCATCCCACATGAATCACATGGACCCTTCAACGATGGT
GTTCTTCACCTTGAAGGATCTAAAGATTGGCGAAACGATGCCGATTTATT
TTCGCAAGAGAGATCCTTCAGCTTATCCTCAGGCTTTGCCTAGAGAAGAA
GCAGATTCCATTCCATTTTCATTGAAACAACTGCCTTACCTTCTTCAATT
CTTCTCGTTCTCAGATGACTCACCCCTAGCCAAAGCCATGGAAGGGACCC
TGAATCATTGCGAAGTTCCTCCCATCGAAGGAGAAACCAAAATTTGTGCT
ACCTCTTTGGAATCCATGCTTGATTTTGTACACGGAACTTTCGGATTGGA
GACCAAATTCCGAGTTCTAGCACAAAATTTCTCACAAAATCAGCTACCAT
TTTCCAAATTACACTATTTTACAAGTGCCTAAACCAATGGGTGCTCCCAA
GATGGTGGCATGGCATATCATGCCTTACCCTTATGCAATCTTCTACTGCA
CAGCCAATGACTGAGA
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