CK740095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740095 vs. ExPASy Swiss-Prot
Match: RK21_ARATH (50S ribosomal protein L21, chloroplastic OS=Arabidopsis thaliana GN=RPL21 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 8.494e-45 Identity = 89/123 (72.36%), Postives = 103/123 (83.74%), Query Frame = 3 Query: 297 VESAAKEEPKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLTPSNCL-QV*EEKNYRRNIGHRQPNTRIRITGITGYQDYPA 662 V +E+ KREEIFAV+M+G RQYIVFPGR++YTQRLK ANV+D+I+LNKVLLVGTKT TYIGKPVVTNA VHAVVE QGL + + +K YRRNIGHRQPNTRIRITGITGY++YPA Sbjct: 87 VSEVTEEKAKREEIFAVIMVGGRQYIVFPGRYLYTQRLKDANVDDQIVLNKVLLVGTKTHTYIGKPVVTNATVHAVVESQGLNDKVVVFKYKPKKKYRRNIGHRQPNTRIRITGITGYEEYPA 209
BLAST of CK740095 vs. ExPASy Swiss-Prot
Match: RK21_SPIOL (50S ribosomal protein L21, chloroplastic OS=Spinacia oleracea GN=RPL21 PE=1 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 2.471e-44 Identity = 91/120 (75.83%), Postives = 104/120 (86.67%), Query Frame = 3 Query: 321 PKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLTPSNCL-QV*EEKNYRRNIGHRQPNTRIRITGITGYQDYPAVTLDS 677 P REEIFAVV+IGSRQYIV PGR+IYTQRLKGA VNDKI+LNKVLLVGTK +TYIG P+VTNAAVHAVVEEQ L + + ++KNYRRNIGHRQP TRI+ITGITGY+DYPA TL++ Sbjct: 118 PPREEIFAVVVIGSRQYIVIPGRWIYTQRLKGATVNDKIVLNKVLLVGTKASTYIGTPIVTNAAVHAVVEEQLLDDKVIVFKYKKKKNYRRNIGHRQPITRIKITGITGYEDYPASTLEA 237
BLAST of CK740095 vs. ExPASy Swiss-Prot
Match: RM21_ARATH (50S ribosomal protein L21, mitochondrial OS=Arabidopsis thaliana GN=RPL21M PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20 Identity = 51/108 (47.22%), Postives = 72/108 (66.67%), Query Frame = 3 Query: 330 EEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLTPSNCL-QV*EEKNYRRNIGHRQPNTRIRITGITGYQ 650 E +FA+V IGS Q+ V G I+T++LK ++NDK+ L KVLL+G+ + T IG+P++ +A VHAVVEE L + + KNYRR GHRQ T++RIT I G + Sbjct: 138 EPVFAIVQIGSHQFKVSNGDSIFTEKLKFCDINDKLELTKVLLLGSASQTIIGRPILPDATVHAVVEEHALDEKVLIFKKKRRKNYRRTRGHRQELTKLRITDIQGIE 245
BLAST of CK740095 vs. ExPASy Swiss-Prot
Match: RM21_DICDI (Probable 39S ribosomal protein L21, mitochondrial OS=Dictyostelium discoideum GN=mrpl21 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.196e-14 Identity = 49/117 (41.88%), Postives = 67/117 (57.26%), Query Frame = 3 Query: 321 PKREEIFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLTPS-NCLQV*EEKNYRRNIGHRQPNTRIRITGITGYQDYPAVT 668 P ++ FAVV I +QY V G I T +++ +V + I+L+KVLLVGTK T IGKP+++N VHA +EEQ T + KNY+R G + T IRI GI Q+ T Sbjct: 56 PIGKDSFAVVHISGKQYKVIEGDIIMTDKIQ-VDVGEHIVLDKVLLVGTKNETIIGKPIISNFKVHAYIEEQAKTEHVTIFKHKPRKNYKRTTGFQGLATYIRIGGIIKGQETTTTT 171
BLAST of CK740095 vs. ExPASy Swiss-Prot
Match: RL21_DICTD (50S ribosomal protein L21 OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rplU PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.257e-12 Identity = 43/102 (42.16%), Postives = 60/102 (58.82%), Query Frame = 3 Query: 336 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLTPSNCL-QV*EEKNYRRNIGHRQPNTRIRITGI 638 +F VV G +QY V G + ++LK ANV D+++L+KVLLVG + IG+P V A V A V Q P + + +K+YRR GHRQP T++ I I Sbjct: 1 MFVVVETGGKQYKVSVGSMVNVEKLK-ANVGDEVVLDKVLLVGKEDEVIIGQPYVEGAKVIAKVVRQDKYPKVIVFKFKRKKHYRRKYGHRQPYTQLSIKEI 101
BLAST of CK740095 vs. ExPASy Swiss-Prot
Match: RL21_SORC5 (50S ribosomal protein L21 OS=Sorangium cellulosum (strain So ce56) GN=rplU PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 3 Query: 336 IFAVVMIGSRQYIVFPGRFIYTQRLKGANVNDKIILNKVLLVGTKTTTYIGKPVVTNAAVHAVVEEQGLTPSNCL-QV*EEKNYRRNIGHRQPNTRIRITGIT 641 ++AV+ G +QY V G+ + ++L G N DK+ ++VLLVG + IGKP+V+ A+V A + Q + + KNYRR GHRQP T ++ITGIT Sbjct: 1 MYAVIKTGGKQYRVAEGQKLRVEKLVG-NAGDKVTFSEVLLVGGDSPK-IGKPLVSGASVAAEITGQDRGKKIVVFKFRRRKNYRRKNGHRQPYTELKITGIT 101 The following BLAST results are available for this feature:
BLAST of CK740095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740095 ID=CK740095; Name=CK740095; organism=Citrus sinensis; type=EST; length=684bpback to top |