CK740102

Overview
NameCK740102
Unique NameCK740102
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9664 contig Csv1_Contig9664:959..1479. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CPR4_CAEEL (Cathepsin B-like cysteine proteinase 4 OS=Caenorhabditis elegans GN=cpr-4 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.567e-27
Identity = 51/83 (61.45%), Postives = 66/83 (79.52%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 249
            VE +FTVYEDF  YK+GVY H TG  +GGHA++++GWGT D+G  YW++AN WN +WG +GYF+I RG+NECGIE  VV G+P
Sbjct:  252 VEAAFTVYEDFYQYKTGVYVHTTGQELGGHAIRILGWGT-DNGTPYWLVANSWNVNWGENGYFRIIRGTNECGIEHAVVGGVP 333          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB_PIG (Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.046e-27
Identity = 48/83 (57.83%), Postives = 66/83 (79.52%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 249
            VE +FTVY DF  YKSGVY+H+TGD+MGGHA++++GWG  ++G  YW++ N WN  WG +G+FKI RG + CGIE ++VAG+P
Sbjct:  249 VEGAFTVYSDFLQYKSGVYQHVTGDLMGGHAIRILGWGV-ENGTPYWLVGNSWNTDWGDNGFFKILRGQDHCGIESEIVAGIP 330          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CYSP_SCHMA (Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 2.673e-27
Identity = 49/81 (60.49%), Postives = 65/81 (80.25%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAG 243
            VE SFTVYEDF +YKSG+YKHITG+ +GGHA+++IGWG  ++   YW++AN WN  WG +GYF+I RG +EC IE +V+AG
Sbjct:  258 VEASFTVYEDFLNYKSGIYKHITGEALGGHAIRIIGWGV-ENKTPYWLIANSWNEDWGENGYFRIVRGRDECSIESEVIAG 337          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB_RAT (Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 5.954e-27
Identity = 50/86 (58.14%), Postives = 67/86 (77.91%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSK 258
            VE +FTV+ DF  YKSGVYKH  GDVMGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG N CGIE ++VAG+P ++
Sbjct:  249 VEGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGI-ENGVPYWLVANSWNVDWGDNGFFKILRGENHCGIESEIVAGIPRTQ 333          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB_PONAB (Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27
Identity = 49/92 (53.26%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 276
            VE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  249 VEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB_MACFA (Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27
Identity = 49/92 (53.26%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 276
            VE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  249 VEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB_HUMAN (Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3)

HSP 1 Score: 119.783 bits (299), Expect = 7.776e-27
Identity = 49/92 (53.26%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNLVKEI 276
            VE +F+VY DF  YKSGVY+H+TG++MGGHA++++GWG  ++G  YW++AN WN  WG +G+FKI RG + CGIE +VVAG+P +    ++I
Sbjct:  249 VEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGV-ENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIPRTDQYWEKI 339          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CATB_MOUSE (Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 1.732e-26
Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 249
            VE +FTV+ DF  YKSGVYKH  GD+MGGHA++++GWG  ++G  YW+ AN WN  WG +G+FKI RG N CGIE ++VAG+P
Sbjct:  249 VEGAFTVFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGV-ENGVPYWLAANSWNLDWGDNGFFKILRGENHCGIESEIVAGIP 330          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CPR5_CAEEL (Cathepsin B-like cysteine proteinase 5 OS=Caenorhabditis elegans GN=cpr-5 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.041e-26
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLP 249
            +EV+FTVYEDF  Y +GVY H  G  +GGHAVK++GWG  D+G  YW++AN WN +WG  GYF+I RG NECGIE   VAG+P
Sbjct:  257 IEVAFTVYEDFYQYTTGVYVHTAGASLGGHAVKILGWGV-DNGTPYWLVANSWNVAWGEKGYFRIIRGLNECGIEHSAVAGIP 338          
BLAST of CK740102 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 6.583e-26
Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 1
Query:    1 VEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWILANQWNRSWGADGYFKIKRGSNECGIEEDVVAGLPSSKNL 264
            V  SF VYEDF HYKSG+YKH  G++ G HAVK+IGWG +++  D+W++AN W+  WG  GYF+I RGSN+CGIE  + AG+  +++L
Sbjct:  256 VVASFAVYEDFRHYKSGIYKHTAGELRGYHAVKMIGWG-NENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGIEGTIAAGIVDTESL 342          
The following BLAST results are available for this feature:
BLAST of CK740102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
CPR4_CAEEL1.567e-2761.45Cathepsin B-like cysteine proteinase 4 OS=Caenorha... [more]
CATB_PIG2.046e-2757.83Cathepsin B OS=Sus scrofa GN=CTSB PE=1 SV=1[more]
CYSP_SCHMA2.673e-2760.49Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CATB_RAT5.954e-2758.14Cathepsin B OS=Rattus norvegicus GN=Ctsb PE=1 SV=2[more]
CATB_PONAB7.776e-2753.26Cathepsin B OS=Pongo abelii GN=CTSB PE=2 SV=1[more]
CATB_MACFA7.776e-2753.26Cathepsin B OS=Macaca fascicularis GN=CTSB PE=2 SV... [more]
CATB_HUMAN7.776e-2753.26Cathepsin B OS=Homo sapiens GN=CTSB PE=1 SV=3[more]
CATB_MOUSE1.732e-2659.04Cathepsin B OS=Mus musculus GN=Ctsb PE=1 SV=2[more]
CPR5_CAEEL5.041e-2660.24Cathepsin B-like cysteine proteinase 5 OS=Caenorha... [more]
CYSP2_HAECO6.583e-2654.55Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6596 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE65E01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740102 ID=CK740102; Name=CK740102; organism=Citrus sinensis; type=EST; length=521bp
GTTGAAGTTTCCTTCACAGTTTATGAGGATTTTGCTCACTACAAATCTGG
GGTCTACAAACACATCACAGGCGATGTAATGGGGGGTCATGCTGTTAAGC
TTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGATTCTCGCT
AATCAGTGGAATAGAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAG
AGGATCAAATGAGTGTGGTATTGAAGAGGATGTGGTTGCTGGTTTGCCTT
CATCCAAAAATCTTGTCAAAGAGATTACAAGTGCAGATATGTTTGAGGAT
GCTTCAGCTTGAGAGCAGACTTTGCTATACCTTCATGTTGTTATTTATAT
ATCAAATGTGTAGCTATAGGGGTGTATCGTTGAACCTAAGCTATCAAGGC
ATGAAATGGGAAGCTCCCGTCTTGCATAATTGAATGTATTAATGGAGTTT
AATGTTGTGTGTAAAAATAGAACCAGTTGTAATAACTTCGTTTCTCCTCG
CCGAATTATTCGTTTAGATGA
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