CK740118
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE1_SOYBN (Arginine decarboxylase OS=Glycine max PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.757e-45 Identity = 70/82 (85.37%), Postives = 77/82 (93.90%), Query Frame = 1 Query: 100 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEEYCGQEHGS 345 YYLGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGPHSFAVTRA+PGPSCGDVLRVMQH+P+LMFETLKHRA+EY ++ + Sbjct: 567 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHQPELMFETLKHRAQEYVSHDNAA 648 HSP 2 Score: 48.1358 bits (113), Expect = 7.757e-45 Identity = 21/25 (84.00%), Postives = 22/25 (88.00%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEMVGG 77 CDSDGKIDKFI G +SLPLHEM GG Sbjct: 540 CDSDGKIDKFINGESSLPLHEMEGG 564
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE1_ARATH (Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.825e-41 Identity = 67/78 (85.90%), Postives = 70/78 (89.74%), Query Frame = 1 Query: 88 SRGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEE 321 S G YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPH FAVTRA+ G S DVLR MQHEP+LMF+TLKHRAEE Sbjct: 551 SGGRYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHGFAVTRAVMGQSSADVLRAMQHEPELMFQTLKHRAEE 628 HSP 2 Score: 49.2914 bits (116), Expect = 4.825e-41 Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEMVGGGC 83 CDSDGKI+KFIGG +SLPLHEM GC Sbjct: 524 CDSDGKINKFIGGESSLPLHEMDNNGC 550
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE2_ARATH (Arginine decarboxylase 2 OS=Arabidopsis thaliana GN=SPE2 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 8.190e-41 Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = 1 Query: 88 SRGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEEYCGQEHGS 345 S G Y+LGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGPHSFAVTRA+PG S DVLR MQHEP+LMF+TLKHRAEE + GS Sbjct: 563 SGGRYFLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVPGQSSADVLRAMQHEPELMFQTLKHRAEEMMHTKGGS 648 HSP 2 Score: 45.8246 bits (107), Expect = 8.190e-41 Identity = 20/28 (71.43%), Postives = 23/28 (82.14%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEMVGGGCG 86 CDSDGKI+KFIGG +SLPLHE+ G G Sbjct: 537 CDSDGKINKFIGGESSLPLHELDKNGSG 564
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE1_DIACA (Arginine decarboxylase OS=Dianthus caryophyllus GN=ADC PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 6.800e-40 Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 1 Query: 100 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEE 321 YYLGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGP S+AVTRA+PGPS DVLRVM HEP+LMF+TLKHRAEE Sbjct: 576 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVQQSDGPQSYAVTRAVPGPSSSDVLRVMHHEPELMFQTLKHRAEE 649 HSP 2 Score: 46.595 bits (109), Expect = 6.800e-40 Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEMVGG 77 CDSDGKIDKFIG +SLPLHE+ GG Sbjct: 549 CDSDGKIDKFIGDESSLPLHELSGG 573
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE1_BRAJU (Arginine decarboxylase OS=Brassica juncea GN=ADC1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.647e-39 Identity = 65/74 (87.84%), Postives = 67/74 (90.54%), Query Frame = 1 Query: 100 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEE 321 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQ DGPH FAVTRAM G S DVLR MQHEP+LMF+TLKHRAEE Sbjct: 556 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQKDGPHGFAVTRAMMGQSSADVLRAMQHEPELMFQTLKHRAEE 629 HSP 2 Score: 44.669 bits (104), Expect = 5.647e-39 Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEMVGGG 80 CDSDGKI+KFIGG +SLPLHE+ G Sbjct: 530 CDSDGKINKFIGGESSLPLHELDNNG 555
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.569e-36 Identity = 70/80 (87.50%), Postives = 74/80 (92.50%), Query Frame = 1 Query: 94 GPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEEYCGQ 333 G YYLGMFLGG+YEEALGG+HNLFGGPSVVRVLQSDGPH FAVTRA+ G SC DVLRVMQHEPQLMFETLKHRA E+CGQ Sbjct: 578 GGYYLGMFLGGSYEEALGGLHNLFGGPSVVRVLQSDGPHGFAVTRAVAGSSCADVLRVMQHEPQLMFETLKHRALEFCGQ 657
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE1_ORYSJ (Arginine decarboxylase OS=Oryza sativa subsp. japonica GN=ADC1 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.050e-35 Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 1 Query: 100 YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAE 318 YYLGMFLGGAY+EALGG+HNLFGGPSVVRV QSDGPH FAVTRA GPSC DVLR MQHEP++MFE LK R + Sbjct: 569 YYLGMFLGGAYQEALGGLHNLFGGPSVVRVSQSDGPHCFAVTRAAAGPSCADVLRSMQHEPEVMFEVLKQRTD 641 HSP 2 Score: 41.5874 bits (96), Expect = 2.050e-35 Identity = 17/22 (77.27%), Postives = 19/22 (86.36%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEM 68 CDSDGK+D FIGG SLPLHE+ Sbjct: 540 CDSDGKVDHFIGGRHSLPLHEL 561
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPE1_SOLLC (Arginine decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 4.570e-24 Identity = 38/42 (90.48%), Postives = 40/42 (95.24%), Query Frame = 1 Query: 94 GPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFA 219 G YYLGMFLGGAYEEALGG+HNLFGGPSVVRV+QSD PHSFA Sbjct: 461 GRYYLGMFLGGAYEEALGGLHNLFGGPSVVRVMQSDSPHSFA 502 HSP 2 Score: 47.3654 bits (111), Expect = 4.570e-24 Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEMVGGGCGEPWALLF 107 CDSDGK+DKFIGG +SLPLHE+ G G + +F Sbjct: 434 CDSDGKVDKFIGGESSLPLHEIGSGDGGRYYLGMF 468
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPEA_SYNR3 (Biosynthetic arginine decarboxylase OS=Synechococcus sp. (strain RCC307) GN=speA PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 5.766e-16 Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 1 Query: 97 PYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAEEYCG 330 PY++G+FLGGAY+E +G +HNLFG + V + S G + V + G + DVL M+H P+ + E L+ +EE G Sbjct: 536 PYWIGLFLGGAYQEVMGNLHNLFGSTNAVSIRLSPG-GPYRVEHVVRGQTNSDVLEAMEHNPEALLERLRQASEEAIG 612 HSP 2 Score: 34.2686 bits (77), Expect = 5.766e-16 Identity = 18/36 (50.00%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTSLPLHEMVGGGCGEP-WALLF 107 CDSDGK+ +FI G++ PL E+ GEP W LF Sbjct: 507 CDSDGKLARFIASGSAKPLLELHELKDGEPYWIGLF 542
BLAST of CK740118 vs. ExPASy Swiss-Prot
Match: SPEA_SYNPX (Biosynthetic arginine decarboxylase OS=Synechococcus sp. (strain WH8102) GN=speA PE=3 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 6.423e-14 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = 1 Query: 97 PYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPQLMFETLKHRAE 318 PY +G+FL GAY+E +G +HNLFG + V + S G S+ + + G + DVL M+H+P+++ E L+ AE Sbjct: 540 PYLIGLFLSGAYQEVMGNLHNLFGTTNAVHIRLSPG-GSYRIDHVVRGDTNADVLEAMEHDPRVLLERLRVAAE 612 HSP 2 Score: 31.5722 bits (70), Expect = 6.423e-14 Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3 Query: 3 CDSDGKIDKFIGGGTS---LPLHEM 68 CDSDG++D+FIG G L LHE+ Sbjct: 511 CDSDGRLDRFIGDGQPKQLLELHEL 535 The following BLAST results are available for this feature:
BLAST of CK740118 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740118 ID=CK740118; Name=CK740118; organism=Citrus sinensis; type=EST; length=444bpback to top |