CK740157

Overview
NameCK740157
Unique NameCK740157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length523
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:698..1220. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT7_ARATH (Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1)

HSP 1 Score: 337.035 bits (863), Expect = 3.148e-92
Identity = 169/174 (97.13%), Postives = 171/174 (98.28%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGYMFTTTAEREIVRD+KEKLAYVALDYEQELETAKSSSSVEKNYELPDGQ+ITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  193 KILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDE 366
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT1_PEA (Actin-1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.196e-91
Identity = 166/174 (95.40%), Postives = 172/174 (98.85%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGYMFTT+AEREIVRD+KEKLAYVALDYEQELETAKSSSS+EKNYELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYMFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT2_PEA (Actin-2 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 2.665e-91
Identity = 165/174 (94.83%), Postives = 172/174 (98.85%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGYMFTT+AEREIVRD+KEKLAYVALDYEQELETAKSSSS+EKNYELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIK VAPPER+YSVWIGGSILASLSTFQQMWISK EYDE
Sbjct:  192 KILTERGYMFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERRYSVWIGGSILASLSTFQQMWISKAEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSJ (Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 3.480e-91
Identity = 166/174 (95.40%), Postives = 171/174 (98.28%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKLAY+ALDYEQELETAKSSSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE
Sbjct:  193 KILTERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 366
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT3_ORYSI (Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2 SV=2)

HSP 1 Score: 333.569 bits (854), Expect = 3.480e-91
Identity = 166/174 (95.40%), Postives = 171/174 (98.28%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKLAY+ALDYEQELETAKSSSSVEK+YELPDGQ+ITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE
Sbjct:  193 KILTERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 366
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT13_SOLTU (Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 4.545e-91
Identity = 165/174 (94.83%), Postives = 172/174 (98.85%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTT+AEREIVRDMKEKLAYVALDYEQELETAKSSS+VEK+YELPDGQ+ITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWI+KGEYDE
Sbjct:  193 KILTERGYSFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDE 366
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT12_SOLTU (Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100 PE=3 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 4.545e-91
Identity = 165/174 (94.83%), Postives = 172/174 (98.85%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTT+AEREIVRDMKEKLAYVALDYEQELETAKSSS+VEK+YELPDGQ+ITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWI+KGEYDE
Sbjct:  173 KILTERGYSFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSAVEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKGEYDE 346
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT_GOSHI (Actin OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.119e-89
Identity = 161/174 (92.53%), Postives = 171/174 (98.28%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTTTAEREIVRD+KEKLAY+ALDYEQELET+K+SSS+EK+YELPDGQ+ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWI+K EYDE
Sbjct:  193 KILTERGYSFTTTAEREIVRDVKEKLAYIALDYEQELETSKTSSSIEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDE 366
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT3_SOYBN (Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2)

HSP 1 Score: 327.791 bits (839), Expect = 1.910e-89
Identity = 164/174 (94.25%), Postives = 171/174 (98.28%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGYMFTT+AEREIVRDMKEKLAYVALDYEQELETAKSSSSVEK++ELPDGQ+ITIGAERFRCP++LFQPS+I MEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMF GIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE
Sbjct:  192 KILTERGYMFTTSAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKSHELPDGQVITIGAERFRCPKILFQPSMIEMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFLGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 365
[Close]
BLAST of CK740157 vs. ExPASy Swiss-Prot
Match: ACT2_ORYSJ (Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 1.910e-89
Identity = 163/174 (93.68%), Postives = 170/174 (97.70%), Query Frame = 2 
Query:    2 KILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKGVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDE 523
            KILTERGY FTT+AEREIVRD+KEKLAYVALDYEQELETAKSSSSVEK+YELPDGQ+ITIGAERFRCPEV+FQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIK VAPPERKYSVWIGGSILASLSTFQQMWIS+ EY+E
Sbjct:  193 KILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISRAEYEE 366
The following BLAST results are available for this feature:
BLAST of CK740157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
ACT7_ARATH3.148e-9297.13Actin-7 OS=Arabidopsis thaliana GN=ACT7 PE=1 SV=1[more]
ACT1_PEA1.196e-9195.40Actin-1 OS=Pisum sativum PE=2 SV=1[more]
ACT2_PEA2.665e-9194.83Actin-2 OS=Pisum sativum PE=2 SV=1[more]
ACT3_ORYSJ3.480e-9195.40Actin-3 OS=Oryza sativa subsp. japonica GN=ACT3 PE... [more]
ACT3_ORYSI3.480e-9195.40Actin-3 OS=Oryza sativa subsp. indica GN=ACT3 PE=2... [more]
ACT13_SOLTU4.545e-9194.83Actin-101 OS=Solanum tuberosum GN=AC101 PE=3 SV=1[more]
ACT12_SOLTU4.545e-9194.83Actin-100 (Fragment) OS=Solanum tuberosum GN=AC100... [more]
ACT_GOSHI1.119e-8992.53Actin OS=Gossypium hirsutum PE=3 SV=1[more]
ACT3_SOYBN1.910e-8994.25Actin-3 OS=Glycine max GN=SAC3 PE=3 SV=2[more]
ACT2_ORYSJ1.910e-8993.68Actin-2 OS=Oryza sativa subsp. japonica GN=ACT2 PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6651 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66C02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740157 ID=CK740157; Name=CK740157; organism=Citrus sinensis; type=EST; length=523bp
GAAGATTCTTACTGAGAGAGGTTACATGTTTACCACCACAGCCGAACGGG
AAATTGTCCGTGACATGAAGGAGAAGCTTGCTTATGTTGCCCTAGACTAT
GAGCAAGAACTTGAGACTGCCAAGAGCAGCTCATCTGTTGAGAAGAACTA
TGAGCTGCCTGATGGCCAGATCATCACCATTGGAGCTGAAAGATTCCGTT
GCCCAGAAGTTCTGTTCCAGCCATCTCTCATCGGAATGGAAGCTGCTGGT
ATTCATGAGACTACCTACAACTCCATCATGAAGTGTGATGTGGATATTAG
AAAGGATCTGTATGGTAACATTGTTCTCAGTGGGGGTTCAACTATGTTCC
CCGGTATTGCCGACCGTATGAGCAAGGAAATCACAGCACTTGCTCCAAGC
AGCATGAAGATCAAGGGCGTGGCTCCACCAGAGAGAAAATACAGTGTTTG
GATTGGAGGATCAATCCTTGCATCCCTCAGCACCTTCCAGCAGATGTGGA
TCTCAAAGGGCGAGTATGATGAG
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