CK740164

Overview
NameCK740164
Unique NameCK740164
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 3.907e-56
Identity = 112/151 (74.17%), Postives = 130/151 (86.09%), Query Frame = 2
Query:  101 PFFSILEDVLELPEEQ-ENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            P FSILED+LE PEEQ E TRNNPSRAY+RDAKAMAATPADV+E+P++YVF VDMPGIK  EI+VQ+E+ENVLVVSG+R+RD KE    +GVK+VRMERR GKFMRKF LPDNA++EKISA C DGVL VT+ K+PPP+   PKTIQVQVA
Sbjct:    9 PIFSILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKE---NEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVTIPKLPPPEPKKPKTIQVQVA 156          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.939e-55
Identity = 110/152 (72.37%), Postives = 130/152 (85.53%), Query Frame = 2
Query:  101 PFFSILEDVLELPEEQEN--TRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            P  SILED+LE+PE+  N  TRNNPSR Y+RDAKAMAATPADV+E+PN+Y FVVDMPGIK  EIKVQVE++NVLVVSGER+R+ KE    +GVKYVRMERR GKFMRKF LP+NA+++KISA+C DGVL VTV+K+PPP+   PKTIQVQVA
Sbjct:    7 PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKE---NEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 8.430e-51
Identity = 106/169 (62.72%), Postives = 129/169 (76.33%), Query Frame = 2
Query:   68 MDLRSLA----GFDSPFFSILEDVLELPEEQENTRN----NPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            MDLR+      G +    S ++D+L+  ++ +         P RAYVRDAKAMAATPADV EYPNSYVF+ DMPG+KA+EIKVQVE +NVLVVSGER    +EKD KDGVKY+RMERR GKFMRKFVLP+NANVE I+A+ QDGVL VTVEK+PPP+   PKT++V+VA
Sbjct:    1 MDLRNFGLSNFGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTE--REKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus GN=HSP17.9 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.878e-50
Identity = 107/165 (64.85%), Postives = 129/165 (78.18%), Query Frame = 2
Query:   68 MDLRSLAGFDSPFFSILEDVLELPEEQE--NTRNN--PSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            MD+ SL GFD P    L  +LE  ++    N  NN  PSRAYVRDA+AMAATPADV E PNSYVF+VDMPG+K+ +IKVQVE +NVLV+SG+R R+    + K+GVKYVRMERR GKFM+KF LP++AN +KISA+CQDGVL VTVEK+PPP+   PKTIQVQVA
Sbjct:    1 MDIDSLMGFD-PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNRE----EEKEGVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.217e-49
Identity = 99/153 (64.71%), Postives = 124/153 (81.05%), Query Frame = 2
Query:   95 DSPFFSILEDVLELPEEQ-ENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            DSP F+ L  +++L ++  E   N P+R YVRDAKAMAATPADV E+PNSYVF+VDMPG+K+ +IKVQVE ENVL++SGERKR+    + K+GVKY++MERR GK MRKFVLP+NAN+E ISA+ QDGVL VTV K+PPP+   PKTIQV+VA
Sbjct:    4 DSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLISGERKRE----EEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 2.712e-49
Identity = 101/161 (62.73%), Postives = 127/161 (78.88%), Query Frame = 2
Query:   68 MDLRSLAGFDSPFFSILEDVLELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            MDLR L   ++P F  L  ++E   E  ++ N PS+ YVRDAKAMAATPADV EYPNSYVFVVDMPG+K+ +IKVQVE +NVL++SGERKR+    + K+G K++RMERR GKFMRKF LP+NAN + ISA+CQDGVL VTV+K+PPP+   PKTI+V+VA
Sbjct:    1 MDLRLLGIDNTPLFHTLHHMMEAAGE--DSVNAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLISGERKRE----EEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 6.041e-49
Identity = 99/164 (60.37%), Postives = 127/164 (77.44%), Query Frame = 2
Query:   68 MDLRSLAGFDSPFFSILEDVLELPEE---QENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPK---TIQVQVA 541
            MD R + G +SP F  L+ ++++ E+      T N P+ +YVRDAKAMAATPADV EYPNSYVF +DMPG+K+ +IKVQVE +N+L++ GERKRD    + K+G KY+RMERR GK MRKFVLP+NAN + ISA+CQDGVL VTV+K+PPP+PK   TIQV+VA
Sbjct:    1 MDFRVM-GLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRD----EEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA 159          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 1.346e-48
Identity = 94/163 (57.67%), Postives = 128/163 (78.53%), Query Frame = 2
Query:   80 SLAGFDSPFFSILEDVLELPEEQ------ENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            ++ G ++P  + L+ +L++P+ +      +     P+RAYVRDA+AMAATPADV + P +Y FVVDMPG+K+S+IKVQVE E +LV+SGER+R   E++ ++  KY+RMERR GKFMRKFVLPDNA+V+KISA+CQDGVL VTVEK+PPP+   PKTI+V+VA
Sbjct:    4 AMFGLETPLMTALQHLLDIPDGEGGAAGKQGATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKVA 166          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.998e-48
Identity = 99/160 (61.88%), Postives = 125/160 (78.12%), Query Frame = 2
Query:   68 MDLRSLAGFDSPFFSILEDVLELPEEQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQPK---TIQVQV 538
            MDLR L GFD P F  + D     +++ +  + PSR ++ DAKAMAATPADV EYPNSYVF++DMPG+K+ +IKVQV+ +NVL +SGERKR+ +E   K+G KYVRMERR GK MRKFVLP+NAN EKI+A+CQDGVL VTVE VPPP+PK   TI+V++
Sbjct:    1 MDLR-LMGFDHPLFHHIMDYAG--DDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEE---KEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154          
BLAST of CK740164 vs. ExPASy Swiss-Prot
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.851e-44
Identity = 90/162 (55.56%), Postives = 121/162 (74.69%), Query Frame = 2
Query:   89 GFDSPFFSILEDVLELPE--------EQENTRNNPSRAYVRDAKAMAATPADVVEYPNSYVFVVDMPGIKASEIKVQVESENVLVVSGERKRDPKEKDNKDGVKYVRMERRFGKFMRKFVLPDNANVEKISALCQDGVLIVTVEKVPPPQ---PKTIQVQVA 541
            G ++P  + L+ +L++P+         +  +  + +R YVRDA+AMAATPADV E P +Y FVVDMPG+   +I+VQVE E VLVVSGER+R+ +E D     KY+RMERR GKFMRKFVLPDNA+V+K++A+C+DGVL VTVEK+PPP+   PKTI+V+VA
Sbjct:    7 GLETPLMAALQHLLDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDD----AKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 164          
The following BLAST results are available for this feature:
BLAST of CK740164 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
HS177_ARATH3.907e-5674.1717.7 kDa class II heat shock protein OS=Arabidopsi... [more]
HS176_ARATH1.939e-5572.3717.6 kDa class II heat shock protein OS=Arabidopsi... [more]
HSP22_IPONI8.430e-5162.7218.8 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP21_HELAN1.878e-5064.8517.9 kDa class II heat shock protein OS=Helianthus... [more]
HSP21_PEA1.217e-4964.7117.1 kDa class II heat shock protein OS=Pisum sati... [more]
HSP21_SOLPE2.712e-4962.7317.3 kDa class II heat shock protein OS=Solanum pe... [more]
HSP21_SOYBN6.041e-4960.3717.9 kDa class II heat shock protein OS=Glycine ma... [more]
HSP18_ORYSJ1.346e-4857.6718.0 kDa class II heat shock protein OS=Oryza sati... [more]
HSP21_IPONI2.998e-4861.8817.2 kDa class II heat shock protein OS=Ipomoea ni... [more]
HSP22_MAIZE5.851e-4455.5617.8 kDa class II heat shock protein OS=Zea mays P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6658 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740164 ID=CK740164; Name=CK740164; organism=Citrus sinensis; type=EST; length=612bp
CAAACACAAAATCGCACTAGCATAGCTAAAGCTCTCGCATATATATAAAA
AAAGAGAAGAATACAACATGGATCTAAGAAGCCTAGCAGGTTTCGATTCA
CCATTCTTCTCAATCCTCGAAGACGTGCTGGAGCTGCCTGAAGAACAAGA
AAATACCCGAAACAACCCGTCAAGAGCCTACGTTCGGGATGCCAAAGCCA
TGGCGGCAACACCAGCAGATGTGGTGGAGTATCCGAATTCATACGTGTTC
GTTGTGGACATGCCAGGGATTAAGGCCAGCGAGATCAAGGTCCAAGTTGA
GAGCGAAAACGTGCTCGTGGTCAGCGGAGAGCGGAAACGGGATCCCAAGG
AGAAAGATAACAAAGATGGTGTTAAGTACGTGAGAATGGAGAGGAGGTTT
GGCAAGTTTATGAGGAAGTTCGTGCTGCCTGACAATGCTAATGTGGAAAA
GATATCTGCGTTGTGTCAGGACGGTGTTTTGATAGTCACTGTCGAGAAAG
TGCCCCCACCGCAGCCAAAGACCATTCAGGTTCAAGTTGCCTGAGACATT
TTAATTTGGGTGTGTTTGTGACTCAATTATCAATCTGACTATCTGAGTGT
CGTGATGTTTGT
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