CK740168
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 6.471e-42 Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 2 Query: 5 DPFSPTRSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV--RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 403 DPF+PTRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIR S RR+TSRI+LPEK+Y+TD+IKAEMKNGVLKV +PK+KE+ER ++ + VD Sbjct: 72 DPFTPTRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELPEKVYKTDEIKAEMKNGVLKVVIPKIKEDERNNIRHINVD 210
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 4.195e-41 Identity = 88/136 (64.71%), Postives = 103/136 (75.74%), Query Frame = 2 Query: 2 FDPFSPTRSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXX--SVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 403 FDPFSP RSLSQVLN +D +T+NP S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+ S RR++SRIDLPEKLY+ D IKAEMKNGVLKVTVPK+KEEER +V VKVD Sbjct: 70 FDPFSPPRSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSSRIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKVD 202
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 7.155e-41 Identity = 86/142 (60.56%), Postives = 104/142 (73.24%), Query Frame = 2 Query: 2 FDPFSPTRSLSQVLNFMDQMTENPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSV----RRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 403 FDPFSPTRS+SQVLN MDQ ENP S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIR RR+TSRI LP+K+Y+ D+IKAEMKNGVLKV +PK+KE+ER DV Q++++ Sbjct: 69 FDPFSPTRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPKMKEQERNDVRQIEIN 210
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 3.551e-40 Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 2 Query: 2 FDPFSPTRSLSQVLNFMDQMTENPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 403 FDPF TRS+ Q++N MDQ+ ENPF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ RRY+SRI+L LY+ D IKAEMKNGVLKVTVPK+KEEE+ DVFQV VD Sbjct: 68 FDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSEAEKETEEEEQRRRYSSRIELTPNLYKIDGIKAEMKNGVLKVTVPKIKEEEKKDVFQVMVD 204
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 2.936e-34 Identity = 67/100 (67.00%), Postives = 81/100 (81.00%), Query Frame = 2 Query: 104 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 403 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+ S RRYTSRIDLP+KLY+ DQI+AEMKNGVLKV VPK+KEEER DV VKV+ Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEGAKEGDEEESARRYTSRIDLPDKLYKIDQIRAEMKNGVLKVVVPKMKEEERKDVISVKVE 211 HSP 2 Score: 23.8682 bits (50), Expect = 2.936e-34 Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 1 Query: 7 SIFTNKEPEPGPELHGSDDGES 72 SIF++ E EPG E G G+S Sbjct: 75 SIFSDSEFEPGSEHDGPGHGQS 96
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 5.139e-31 Identity = 72/135 (53.33%), Postives = 92/135 (68.15%), Query Frame = 2 Query: 5 DPFSPTRSLSQVLNFMDQMTENPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 403 DPFS +SL ++L+ MD + P LRRGW+AKE+++AL+L +DMPGLGKE V+V EQN+LVI+ RY+ RI+L ++YR DQIKAEMKNGVLKV VPKVKEE+R DVFQV V+ Sbjct: 87 DPFSAPQSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQRRDVFQVNVE 220
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS26M_ORYSJ (26.2 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP26.2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 8.491e-26 Identity = 70/142 (49.30%), Postives = 85/142 (59.86%), Query Frame = 2 Query: 5 DPFSPTRSLSQVLNFM-DQMTENPFFSGTRG----GLRRG--WDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRXXXXXXXXXXXSVR--RYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVKVD 403 DPF SL ++L M D GT G RRG W AKE DDA++L + MPGLGKE V+V EQN+LVI+ RYT RI+LP ++ D+IKAEMKNGVL+V VPK+KEEER DVFQV V+ Sbjct: 107 DPFGAPTSLGRLLALMEDAAVATAAAPGTNGLATAAARRGGWWVAKEDDDAVHLKVSMPGLGKEHVKVWAEQNSLVIKGEGEKDPEDDADAAPPRYTRRIELPADAFKMDKIKAEMKNGVLRVAVPKLKEEERKDVFQVNVE 248
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.393e-20 Identity = 57/142 (40.14%), Postives = 82/142 (57.75%), Query Frame = 2 Query: 5 DPFSPTRSLSQVLNFMDQMTEN--PFFSGTRGG-----LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 397 DP SP R++ Q+L+ MD+M E+ P RGG +R WD KE + + + DMPGL KEDV++S+E N LVI + SV Y +R+ LP+ + D+IKAE+KNGVL +T+PK K E + Q++ Sbjct: 87 DPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEK-DKIKAELKNGVLFITIPKTKVERKVIDVQIQ 227
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 2.240e-18 Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 2 Query: 5 DPFSPTRSLSQVLNFMDQMTENPF-FSGTR---GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI----RXXXXXXXXXXXSVRRYTS---RIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 397 DP+SP RS+ Q+L+ MD++ E+ F G G +R WD K+ + + + DMPGL KEDV+VS+E + LVI + S R Y+S R+ LP+ + D++KAE+KNGVL +T+PK K E + QV+ Sbjct: 41 DPWSPMRSMRQILDTMDRVFEDTMTFPGRNIGGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEK-DKVKAELKNGVLYITIPKTKVERKVIDVQVQ 181
BLAST of CK740168 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 2.925e-18 Identity = 49/141 (34.75%), Postives = 85/141 (60.28%), Query Frame = 2 Query: 5 DPFSPTRSLSQVLNFMDQMTENPF-FSGTR----GGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVI-----RXXXXXXXXXXXSVRRYTSRIDLPEKLYRTDQIKAEMKNGVLKVTVPKVKEEERADVFQVK 397 DP SP R++ Q+++ MD++ E+ F G+R G +R WD K+ ++ + + DMPGL KE+V+VS+E + LVI + + Y +R+ LP+ + + D++KAE+KNGVL +++PK K E++ ++K Sbjct: 102 DPMSPMRTMRQMMDTMDRLFEDTMTFPGSRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSWGRNYSSYDTRLSLPDNVDK-DKVKAELKNGVLLISIPKTKVEKKVTDVEIK 241 The following BLAST results are available for this feature:
BLAST of CK740168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740168 ID=CK740168; Name=CK740168; organism=Citrus sinensis; type=EST; length=466bpback to top |