CK740176
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: TDT_ARATH (Tonoplast dicarboxylate transporter OS=Arabidopsis thaliana GN=TDT PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 5.046e-44 Identity = 86/109 (78.90%), Postives = 98/109 (89.91%), Query Frame = 3 Query: 3 PIVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTDGDV 329 P VCLI+A ITEFTSNNATTTL++PLLI+IAK M +HPLLLMVPGAIGAQF+FL+PTGTPSN+VGFTTGHIEI+DMIKTGLPLKIAG ++ LMPTLGAYVF + G V Sbjct: 432 PTVCLIAATITEFTSNNATTTLLVPLLIEIAKNMGIHPLLLMVPGAIGAQFAFLLPTGTPSNVVGFTTGHIEIKDMIKTGLPLKIAGTIFLSILMPTLGAYVFASMGGV 540
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A3_MOUSE (Solute carrier family 13 member 3 OS=Mus musculus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.002e-21 Identity = 40/102 (39.22%), Postives = 68/102 (66.67%), Query Frame = 3 Query: 6 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 311 ++ ++ A TEF SN AT + LP+L ++A +HVHPL LM+PG +G ++F++P TP N + F+TGH+ ++DM++TGL + + G+ ++ M T +F Sbjct: 468 LITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVGCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQTIF 569
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A3_RAT (Solute carrier family 13 member 3 OS=Rattus norvegicus GN=Slc13a3 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 2.979e-20 Identity = 39/102 (38.24%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 6 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 311 ++ ++ A TEF SN AT + LP+L ++A +HVHPL LM+PG + ++F++P TP N + F+TGH+ ++DM++TGL + + G+ ++ M T +F Sbjct: 468 LITVVIAFFTEFASNTATIIIFLPVLAELAIRLHVHPLYLMIPGTVSCSYAFMLPVSTPPNSIAFSTGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQAIF 569
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A3_HUMAN (Solute carrier family 13 member 3 OS=Homo sapiens GN=SLC13A3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.636e-20 Identity = 43/123 (34.96%), Postives = 72/123 (58.54%), Query Frame = 3 Query: 6 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTDGDVQ*LQTLVNWGRFLSI 374 ++ ++ A TEF SN AT + LP+L ++A + VHPL LM+PG +G F+F++P TP N + F +GH+ ++DM++TGL + + G+ ++ M T +F L T +W S+ Sbjct: 470 LITVVIAFFTEFASNTATIIIFLPVLAELAIRLRVHPLYLMIPGTVGCSFAFMLPVSTPPNSIAFASGHLLVKDMVRTGLLMNLMGVLLLSLAMNTWAQTIFQ-------LGTFPDWADMYSV 585
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A5_RAT (Solute carrier family 13 member 5 OS=Rattus norvegicus GN=Slc13a5 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 3.294e-19 Identity = 45/105 (42.86%), Postives = 68/105 (64.76%), Query Frame = 3 Query: 6 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 320 I+ I A+ TE TSN ATTTL LP+ +A+++ +HPL +M+P + A +F++P TP N + F GH+++ DM+KTGL + I GIA++ + T G VF D Sbjct: 455 ILSCIVAMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTLSASLAFMLPVATPPNAIVFAYGHLKVIDMVKTGLVMNILGIASVFLSVNTWGRAVFNLD 559
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A5_HUMAN (Solute carrier family 13 member 5 OS=Homo sapiens GN=SLC13A5 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.135e-18 Identity = 41/105 (39.05%), Postives = 69/105 (65.71%), Query Frame = 3 Query: 6 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 320 I+ L+ A+ TE TSN ATTTL LP+ +++++ ++PL +M+P + A F+F++P TP N + FT GH+++ DM+KTG+ + I G+ + + T G +F D Sbjct: 451 ILSLLVAVFTECTSNVATTTLFLPIFASMSRSIGLNPLYIMLPCTLSASFAFMLPVATPPNAIVFTYGHLKVADMVKTGVIMNIIGVFCVFLAVNTWGRAIFDLD 555
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A4_HUMAN (Solute carrier family 13 member 4 OS=Homo sapiens GN=SLC13A4 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 6.211e-18 Identity = 37/105 (35.24%), Postives = 67/105 (63.81%), Query Frame = 3 Query: 6 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 320 + C++ +I+TEF SN AT T+ LP+L +++T+H++PL ++P + F+ ++P G P N + F+ GH +I+DM+K GL + + G+ + + T G +F D Sbjct: 507 LACILVSIVTEFVSNPATITIFLPILCSLSETLHINPLYTLIPVTMCISFAVMLPVGNPPNAIVFSYGHCQIKDMVKAGLGVNVIGLVIVMVAINTWGVSLFHLD 611
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A5_MOUSE (Solute carrier family 13 member 5 OS=Mus musculus GN=Slc13a5 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.360e-17 Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 3 Query: 12 CLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 320 CL+ A+ TE TSN ATTTL LP+ +A+++ +HPL +M+P + A +F++P TP N + F GH+ + DM+KTGL + GI ++ + T G +F D Sbjct: 458 CLV-AMTTECTSNVATTTLFLPIFASMARSIGIHPLYVMIPCTMSASLAFMLPVATPPNAIVFAYGHLRVVDMMKTGLIMNFVGILSVFLSVNTWGRAMFNLD 559
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A2_RAT (Solute carrier family 13 member 2 OS=Rattus norvegicus GN=Slc13a2 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 1.998e-16 Identity = 41/105 (39.05%), Postives = 64/105 (60.95%), Query Frame = 3 Query: 6 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVFGTD 320 I+CL+ AI TE TSN ATTTL LP+L +A+ + +HPL +M+P + A +F++P TP N + F+ G +++ DM + G L I G+ A + + +F D Sbjct: 457 ILCLLIAIFTECTSNVATTTLFLPILASMAQAICLHPLYVMLPCTLAASLAFMLPVATPPNAIVFSFGGLKVSDMARAGFLLNIIGVLATTLSINSWSIPIFKLD 561
BLAST of CK740176 vs. ExPASy Swiss-Prot
Match: S13A2_RABIT (Solute carrier family 13 member 2 OS=Oryctolagus cuniculus GN=SLC13A2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.610e-16 Identity = 38/102 (37.25%), Postives = 64/102 (62.75%), Query Frame = 3 Query: 6 IVCLISAIITEFTSNNATTTLVLPLLIQIAKTMHVHPLLLMVPGAIGAQFSFLVPTGTPSNIVGFTTGHIEIQDMIKTGLPLKIAGIAAMAFLMPTLGAYVF 311 I+CL+ A TE TSN ATTTL+LP+L +A+ + +HPL +M+P + + +F++P TP N + F+ G + + DM + G+ L I G+ + + + G +F Sbjct: 465 IICLLVATFTECTSNAATTTLLLPILASMAQAICLHPLYVMLPCTLASSLAFMLPVATPPNAIVFSFGGLRVSDMARAGIMLNIIGVLVIMLAINSWGVPMF 566 The following BLAST results are available for this feature:
BLAST of CK740176 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740176 ID=CK740176; Name=CK740176; organism=Citrus sinensis; type=EST; length=508bpback to top |