CK740195

Overview
NameCK740195
Unique NameCK740195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length565
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.537e-28
Identity = 70/166 (42.17%), Postives = 93/166 (56.02%), Query Frame = 2
Query:   20 MEKMKMAKR--FQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV 505
            M    MA+R     KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  LK  G+ V G VCHV   + R+ L+   ++  G +               ++   E V  K+ D+NVK++ LL +   P + K  G S+V++SSIA Y P  S+  Y V
Sbjct:    1 MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNV 166          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DHRS2_HUMAN (Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 2.484e-27
Identity = 65/169 (38.46%), Postives = 94/169 (55.62%), Query Frame = 2
Query:   56 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQ-KGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 559
            +VA+VT ST GIGF IA RL  +GA VV+SSRKQ+NVD A+ KL+  G+ V G+VCHV   + R+ L+ + +E  G +                L T E +  K+  +NVKS  LLL    P+++ +  +V+L+SSIA Y P  ++ +Y V              E+AP
Sbjct:   15 RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGKAEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQLLPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAP 183          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DHRS4_HUMAN (Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 5.533e-27
Identity = 69/170 (40.59%), Postives = 91/170 (53.53%), Query Frame = 2
Query:   56 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 559
            KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+  G+ V G VCHV   + R+ L+   ++  G I               I+   E V  K  DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V              E+AP
Sbjct:   15 KVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAP 184          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 9.439e-27
Identity = 68/170 (40.00%), Postives = 91/170 (53.53%), Query Frame = 2
Query:   56 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 559
            KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD+AV  L+  G+ V G VCHV   + R+ L+   ++  G I               ++   E V  K  DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V              E+AP
Sbjct:   15 KVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAP 184          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.684e-26
Identity = 65/152 (42.76%), Postives = 87/152 (57.24%), Query Frame = 2
Query:   56 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGV 505
            KVAIVTAST GIG  IA RL  +GA VV+SSRKQ+NVD AV  L+A G+ V G VCHV   + R+ L+   +   G I               ++   E V  K+ DINVK+  L+ +   P ++K  G SVV+++SIA + P S +  Y V
Sbjct:   15 KVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNV 166          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DR4L2_HUMAN (Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 6.118e-26
Identity = 67/170 (39.41%), Postives = 90/170 (52.94%), Query Frame = 2
Query:   56 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 559
            KVA+VTAST GIGF IA RL  + A VVVSSRKQ+NVD+AV  L+  G+ V G VCHV   + R+ L+   ++  G I               ++   E V  K  DINVK+  L+ +   P ++K  G SVV++SSIA + P    + Y V              E+AP
Sbjct:   31 KVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAP 200          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.363e-25
Identity = 63/175 (36.00%), Postives = 91/175 (52.00%), Query Frame = 2
Query:   41 KRFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 559
            K  + KVA+VTAST GIG  IA RL  +GA VVVSSRKQ+NVD  V  L+  G+ V G VCHV   + R+ L+   +   G +               I+   E V  K+  +NVK+++L+ +   P ++K  G SV+++SS+  Y P  ++  Y V              E+AP
Sbjct:   10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAP 184          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 6.764e-25
Identity = 64/170 (37.65%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   56 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 559
            KVA+VTAST GIGF IA RL  +GA VVVSSRKQ+NVD AV  L+  G+ V G+VCHV   + R+ LI   +++   I               ++   E V  K+  INV ++ ++++   P ++K  G SVV++ S+AG+    S+  Y V              E+AP
Sbjct:   15 KVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHRGIDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAP 184          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: DHRS4_RAT (Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.834e-25
Identity = 65/170 (38.24%), Postives = 92/170 (54.12%), Query Frame = 2
Query:   56 KVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVKLKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQK--GSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 559
            KVA+VTAST GIG  IA RL  +GA VV+SSRKQ+NVD AV  L+  G+ V GVVCHV   + R+ L+N  ++    I               ++   E V  K+  INV +S ++++   P ++K  G SVV++SS+AG+    S+  Y V              E+AP
Sbjct:   15 KVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGKAEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAVVPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAP 184          
BLAST of CK740195 vs. ExPASy Swiss-Prot
Match: Y182_METEA (Uncharacterized oxidoreductase MexAM1_META1p0182 OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=MexAM1_META1p0182 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.548e-13
Identity = 51/173 (29.48%), Postives = 86/173 (49.71%), Query Frame = 2
Query:   44 RFQGKVAIVTASTQGIGFGIAERLGLEGASVVVSSRKQKNVDEAVVK-LKARGIEVIGVVCHVSNGQQRKYLINQTIEKFGKIXXXXXXXXXXXXXXXILQTKESVLVKLWDINVKSSILLLQDAAPHLQKGSSVVLISSIAGYQPQSSMAMYGVXXXXXXXXXXXXXXEMAP 559
            + +GKVA+VT +++GIG  IA+ L  +GA+VVV+    K   +AVV+ + A G + I V   VS   Q + L+   +++FG++               I +  E    +++D+NV   +L  Q A+ HL +G S++ ISS+       + A+Y                E+AP
Sbjct:    3 KLEGKVAVVTGASKGIGAAIAKALAKDGAAVVVNYASSKAGADAVVEAITAAGGKAIAVQADVSQAVQARGLVEAAVQQFGRL-DVLVNNSGVYEFAAIEEVTEEHYRRIFDVNVLGVLLATQAASKHLGEGGSIINISSVVTDVLMPTSAVYSGTKGALNAISGVLANELAP 174          
The following BLAST results are available for this feature:
BLAST of CK740195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
DHRS4_BOVIN8.537e-2842.17Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
DHRS2_HUMAN2.484e-2738.46Dehydrogenase/reductase SDR family member 2 OS=Hom... [more]
DHRS4_HUMAN5.533e-2740.59Dehydrogenase/reductase SDR family member 4 OS=Hom... [more]
DHRS4_PONAB9.439e-2740.00Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]
DHRS4_RABIT4.684e-2642.76Dehydrogenase/reductase SDR family member 4 OS=Ory... [more]
DR4L2_HUMAN6.118e-2639.41Dehydrogenase/reductase SDR family member 4-like 2... [more]
DHRS4_PIG1.363e-2536.00Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
DHRS4_MOUSE6.764e-2537.65Dehydrogenase/reductase SDR family member 4 OS=Mus... [more]
DHRS4_RAT8.834e-2538.24Dehydrogenase/reductase SDR family member 4 OS=Rat... [more]
Y182_METEA4.548e-1329.48Uncharacterized oxidoreductase MexAM1_META1p0182 O... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_6690 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740195 ID=CK740195; Name=CK740195; organism=Citrus sinensis; type=EST; length=565bp
AGAAAGCAAGCCGAACCTAATGGAGAAGATGAAGATGGCAAAAAGATTCC
AAGGGAAGGTGGCGATCGTAACGGCTTCGACTCAGGGCATTGGCTTCGGC
ATCGCTGAGCGGCTCGGCTTGGAAGGCGCCTCCGTGGTTGTCTCTTCACG
AAAGCAGAAAAATGTGGATGAAGCAGTTGTCAAACTCAAAGCTCGAGGAA
TCGAAGTTATTGGAGTTGTTTGTCATGTGTCAAATGGACAACAGAGAAAG
TATCTCATAAACCAAACTATTGAGAAATTTGGAAAAATAGATGTGGTTGT
TTCAAATGCTGCTGCCAATCCCTCTGTTGATTCCATCCTGCAAACCAAAG
AATCAGTTCTCGTCAAGTTATGGGATATCAATGTTAAATCCAGTATACTT
CTTCTACAGGATGCTGCTCCTCACTTGCAGAAGGGTTCTTCAGTTGTTTT
GATTTCCTCTATAGCTGGCTATCAGCCACAGTCATCTATGGCCATGTATG
GAGTCACTAAGACCGCTTTGTTAGGTTTGACCCAGGCTCTTGCAGCTGAA
ATGGCTCCAGATACT
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