CK740207

Overview
NameCK740207
Unique NameCK740207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length511
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: AB13I_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=TGD3 PE=1 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 5.062e-76
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKKGENGL 504
            VG+IGPSGTGKSTILKI+AGLLAPDKGEVYIRG+KRAGLISDEEISGLRIGLVFQSAALFDSL+VRENVGFLLYE SKM + QISELV + LAAVGLKGVE+RLPSELSGGMKKRVALARS+IFD TKE +EPEVLLYDEPTAGLDPIASTVVEDLIRSVH   E+ +
Sbjct:  113 VGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEISGLRIGLVFQSAALFDSLSVRENVGFLLYERSKMSENQISELVTQTLAAVGLKGVENRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHMTDEDAV 280          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: MKL_MYCTU (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium tuberculosis GN=mkl PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.133e-28
Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE--EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            ++GPSGTGKS  LK + GLL P++G + I G       + E  EI  L  G++FQ  ALF S+ + +N  F L E++K ++ +I ++V E LA VGL G E + P E+SGGM+KR  LAR+++ D       P+++L DEP +GLDP+ +  +  LI  ++
Sbjct:   58 LLGPSGTGKSVFLKSLIGLLRPERGSIIIDGTDIIECSAKELYEIRTL-FGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLALVGLGGDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLDPVRTAYLSQLIMDIN 210          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: MKL_MYCBO (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium bovis GN=mkl PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.133e-28
Identity = 66/161 (40.99%), Postives = 100/161 (62.11%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE--EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            ++GPSGTGKS  LK + GLL P++G + I G       + E  EI  L  G++FQ  ALF S+ + +N  F L E++K ++ +I ++V E LA VGL G E + P E+SGGM+KR  LAR+++ D       P+++L DEP +GLDP+ +  +  LI  ++
Sbjct:   58 LLGPSGTGKSVFLKSLIGLLRPERGSIIIDGTDIIECSAKELYEIRTL-FGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLALVGLGGDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLDPVRTAYLSQLIMDIN 210          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: MKL_MYCLE (Probable ribonucleotide transport ATP-binding protein mkl OS=Mycobacterium leprae GN=mkl PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.951e-27
Identity = 65/161 (40.37%), Postives = 99/161 (61.49%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDE--EISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            ++GPSGTGKS  LK + GLL P++G + I G       + E  EI  L  G++FQ  ALF S+ + +N  F L E++K ++ +I ++V E L  VGL G E + P E+SGGM+KR  LAR+++ D       P+++L DEP +GLDP+ +  +  LI  ++
Sbjct:   46 LLGPSGTGKSVFLKSLIGLLRPERGSILIDGTDIIECSAKELYEIRTL-FGVLFQDGALFGSMNLYDNTAFPLREHTKKKESEIRDIVMEKLQLVGLGGDEKKFPGEISGGMRKRAGLARALVLD-------PQIILCDEPDSGLDPVRTAYLSQLIMDIN 198          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_SYNE7 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Synechococcus elongatus (strain PCC 7942) GN=cysA PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.345e-27
Identity = 70/161 (43.48%), Postives = 100/161 (62.11%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            V ++GPSG+GKST+L++IAGL  PD G +++ GR      ++E +   +IG VFQ  ALF  LTVR+N+ F L E  K   E++   V+E L  V L G+ DR PS+LSGG ++RVALAR++       +V+P+VLL DEP   LD      +   +R +H
Sbjct:   37 VALLGPSGSGKSTLLRLIAGLEQPDSGRIFLTGRD----ATNESVRDRQIGFVFQHYALFKHLTVRKNIAFGL-ELRKHTKEKVRARVEELLELVQLTGLGDRYPSQLSGGQRQRVALARAL-------AVQPQVLLLDEPFGALDAKVRKDLRSWLRKLH 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: Y1087_HAEIN (Uncharacterized ABC transporter ATP-binding protein HI1087 OS=Haemophilus influenzae GN=HI1087 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 7.412e-27
Identity = 66/162 (40.74%), Postives = 105/162 (64.81%), Query Frame = 1
Query:    7 IIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLR--IGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHK 486
            I+GPSG GK+T+LK+I G L P++GE+   G+    L S+ E+  +R  +G++FQS ALF  ++  +NV F + E++ + +  I ++V   L AVGL+G    +PSELSGGM +R ALAR+I  D       P+++++DEP  G DPI+  V+  LI+ +++
Sbjct:   36 IMGPSGIGKTTLLKLIGGQLMPEQGEILFDGQDICRL-SNRELYEVRKRMGMLFQSGALFTDISTFDNVAFPIREHTHLPENLIRQIVLMKLEAVGLRGAAALMPSELSGGMARRAALARAIALD-------PDLIMFDEPFTGQDPISMGVILSLIKRLNE 189          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_BACHD (Sulfate/thiosulfate import ATP-binding protein cysA OS=Bacillus halodurans GN=cysA PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 5.312e-25
Identity = 63/166 (37.95%), Postives = 103/166 (62.05%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLY---ENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            V ++GPSG+GK+++L+IIAGL A D+G++Y    K    ++    +  ++G VFQ  ALF  +TV +N+ + L       +   ++I+E V+E LA V L+G++DR P++LSGG ++R+ALAR++       +VEP+VLL DEP   LD      +   +R +H +
Sbjct:   31 VALLGPSGSGKTSLLRIIAGLEAADQGDIYFHKDK----VTQTHAASRQVGFVFQHYALFPHMTVADNISYGLRVKPRKERPSKKEIAEKVRELLALVKLEGMDDRYPAQLSGGQRQRIALARAL-------AVEPKVLLLDEPFGALDAKVRKDLRKWLRKLHNE 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_SYNY3 (Sulfate/thiosulfate import ATP-binding protein cysA OS=Synechocystis sp. (strain PCC 6803) GN=cysA PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 6.937e-25
Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVH 483
            V ++GPSG+GKST+L+ IAGL  PD+G++ I G+    +    +I    IG VFQ  ALF  LT+R+N+ F L E  K    +  E V+E L+ + L+G+ +R PS+LSGG ++RVALAR++       +V+P+VLL DEP   LD      +   +R +H
Sbjct:   31 VALLGPSGSGKSTLLRAIAGLEEPDQGQIIINGQDATHV----DIRKRNIGFVFQHYALFKHLTIRQNIAFGL-EIRKHPPAKTKERVEELLSLIQLEGLGNRYPSQLSGGQRQRVALARAL-------AVQPQVLLLDEPFGALDAKVRKELRAWLRKLH 179          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: FBPC_ECO57 (Fe(3+) ions import ATP-binding protein fbpC OS=Escherichia coli O157:H7 GN=fbpC PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 9.060e-25
Identity = 67/163 (41.10%), Postives = 101/163 (61.96%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            V ++GPSG GK+TIL+++AGL  P +G+++I G      ++   I    I +VFQS ALF  +++ ENVG+ L      R E + + VKE LA V L+G EDR   ++SGG ++RVALAR++I       ++P+VLL+DEP + LD      + D IR + K+
Sbjct:   35 VTLLGPSGCGKTTILRLVAGLEKPSEGQIFIDGED----VTHRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVSRSE-VKQRVKEALAMVDLEGFEDRYVDQISGGQQQRVALARALI-------LKPKVLLFDEPLSNLDANLRRSMRDKIRELQKQ 185          
BLAST of CK740207 vs. ExPASy Swiss-Prot
Match: CYSA_MESVI (Probable sulfate/thiosulfate import ATP-binding protein cysA OS=Mesostigma viride GN=cysA PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 9.060e-25
Identity = 65/163 (39.88%), Postives = 99/163 (60.74%), Query Frame = 1
Query:    1 VGIIGPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYENSKMRDEQISELVKENLAAVGLKGVEDRLPSELSGGMKKRVALARSIIFDNTKESVEPEVLLYDEPTAGLDPIASTVVEDLIRSVHKK 489
            + ++GPSG+GKST+L+IIAGL  PD+G ++I G+  +G      I    IG VFQ+ ALF ++TV +N+ F L E  ++    IS  V + L  V L+ +  R P++LSGG ++R+ALAR++       ++EP+VLL DEP   LD      +   +R +H K
Sbjct:   31 IALLGPSGSGKSTLLRIIAGLDTPDEGTIWISGKNASGY----SIQSRNIGFVFQNYALFKNMTVYDNIAFGL-ELRRISFNDISRKVNKLLELVQLQNLGHRYPAQLSGGQRQRIALARAL-------AIEPKVLLLDEPFGALDARVRKNLRAWLRDLHNK 181          
The following BLAST results are available for this feature:
BLAST of CK740207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AB13I_ARATH5.062e-7686.90Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplast... [more]
MKL_MYCTU5.133e-2840.99Probable ribonucleotide transport ATP-binding prot... [more]
MKL_MYCBO5.133e-2840.99Probable ribonucleotide transport ATP-binding prot... [more]
MKL_MYCLE1.951e-2740.37Probable ribonucleotide transport ATP-binding prot... [more]
CYSA_SYNE74.345e-2743.48Sulfate/thiosulfate import ATP-binding protein cys... [more]
Y1087_HAEIN7.412e-2740.74Uncharacterized ABC transporter ATP-binding protei... [more]
CYSA_BACHD5.312e-2537.95Sulfate/thiosulfate import ATP-binding protein cys... [more]
CYSA_SYNY36.937e-2541.61Sulfate/thiosulfate import ATP-binding protein cys... [more]
FBPC_ECO579.060e-2541.10Fe(3+) ions import ATP-binding protein fbpC OS=Esc... [more]
CYSA_MESVI9.060e-2539.88Probable sulfate/thiosulfate import ATP-binding pr... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6702 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE66H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740207 ID=CK740207; Name=CK740207; organism=Citrus sinensis; type=EST; length=511bp
GTTGGTATAATAGGGCCTTCAGGCACTGGGAAATCAACGATTTTAAAGAT
TATTGCTGGGCTTCTTGCTCCAGACAAGGGAGAGGTTTACATTCGAGGTA
GGAAGAGAGCTGGTTTGATTAGCGATGAGGAGATATCTGGTCTTCGGATT
GGATTGGTTTTCCAAAGTGCGGCTCTTTTTGACTCATTGACTGTCCGGGA
AAATGTTGGTTTCCTTCTGTATGAAAATTCGAAGATGCGTGATGAACAAA
TTTCAGAGCTTGTGAAGGAAAATTTGGCTGCTGTTGGATTAAAGGGAGTT
GAGGATCGCTTACCATCTGAGTTGTCTGGTGGAATGAAGAAAAGAGTTGC
TTTAGCTCGATCCATAATTTTCGATAACACAAAGGAATCAGTGGAGCCAG
AGGTGCTGTTGTATGATGAACCTACGGCTGGCCTTGATCCCATTGCATCC
ACTGTAGTTGAAGATCTGATCCGTTCCGTTCATAAGAAAGGTGAAAATGG
ACTTGCCAACC
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