CK740213
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740213 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.779e-50 Identity = 61/110 (55.45%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 88 LKVASQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLP-LKERFFIQPLSP 414 L+ + Q+SG NRL+ P+ SRVAV + G +RAQQ S E ETSRRAM+G VAAG+ASGSFV+AVLA+A PI V T NSD+ RD LP K+RF++QPL P Sbjct: 19 LEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPP 128 HSP 2 Score: 109.383 bits (272), Expect = 1.779e-50 Identity = 58/90 (64.44%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 426 KESKGVSKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPK-MKTIPQEPHWKALQTIGNLDHAAKIKSTPEAEKYYAETVS 692 + +K + +ILNVK+ ID+KAWP +QNDLRLRASYLRYDL T+ISAKPK K QE K +I NLDHAAKIKS EAEKYY +TVS Sbjct: 133 QRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVS 222
BLAST of CK740213 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 1.779e-50 Identity = 60/88 (68.18%), Postives = 72/88 (81.82%), Query Frame = 3 Query: 432 SKGVSKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPK-MKTIPQEPHWKALQTIGNLDHAAKIKSTPEAEKYYAETVS 692 +K +K+I+NVK IDKKAWPYVQNDLRLRASYLRYDLNT+ISAKPK K ++ K QTI NLD+AA+ KS+P+AEKYY+ETVS Sbjct: 133 AKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVS 220 HSP 2 Score: 102.449 bits (254), Expect = 1.779e-50 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 88 LKVASQLSGPNRLNAPSNSRVAVA--RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSP 414 L+ + Q++G NRLN SRV+V R+G +RAQQ + PE+SRR++IGLVAAG+A GSFV+AV A+A PIKV T NSD+ RD L LK+RF+IQPLSP Sbjct: 19 LEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSP 126
BLAST of CK740213 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3) HSP 1 Score: 112.464 bits (280), Expect = 4.554e-45 Identity = 63/99 (63.64%), Postives = 74/99 (74.75%), Query Frame = 3 Query: 399 PTT*SSPGGKESKGVSKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPK-MKTIPQEPHWKALQTIGNLDHAAKIKSTPEAEKYYAETVS 692 P T ++ KES +KDI+NVK LID+KAWPYVQNDLR +ASYLRYDLNTIIS+KPK K ++ K TI NLD+AAK KS +AEKYYAETVS Sbjct: 119 PPTEAAARAKES---AKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVS 214 HSP 2 Score: 89.3521 bits (220), Expect = 4.554e-45 Identity = 59/111 (53.15%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 88 LKVASQLSGPNRLNAPSNSRVAVA-RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKV-XXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSP 414 L+ + +++G +RLN + RVAVA RS VRAQQ+ ETSRR++IGLVAAG+A GSFVQAVLADA IKV T NSD+ RD L LK+RF++QPL P Sbjct: 15 LEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPP 120
BLAST of CK740213 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.542e-42 Identity = 60/112 (53.57%), Postives = 73/112 (65.18%), Query Frame = 1 Query: 106 LSGPNRLNAPSNSRVAVARSGFTVRAQQ---------ASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSP 414 +SG NR + S+SR F VRAQQ ++ +P+++RRAM+GLVA G+AS SFVQAVLA+A PIKV TLNSDE RDL LPLKERF+IQPLSP Sbjct: 17 MSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSP 126 HSP 2 Score: 92.4337 bits (228), Expect = 1.542e-42 Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 3 Query: 444 SKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPK--MKTIPQEPHWKALQTIGNLDHAAKIKSTPEAEKYYAETVS 692 +K+I+ VK+ ID+K NDLRLRASYLRYDLNT+IS+KPK +++ + K Q I NLD+AAK+KS P+AEKYYA+ VS Sbjct: 137 AKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVS 221
BLAST of CK740213 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.626e-38 Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 3 Query: 435 KGVSKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPK-MKTIPQEPHWKALQTIGNLDHAAKIKSTPEAEKYYAET 686 K ++DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK K +E K TI +LDHAAKIKSTPEAEKY+A T Sbjct: 121 KTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAAT 205 HSP 2 Score: 67.3958 bits (163), Expect = 1.626e-38 Identity = 42/96 (43.75%), Postives = 54/96 (56.25%), Query Frame = 1 Query: 142 SRVAVARSGFTVRAQQASNE----PETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSP 414 SR A +R+ V +AS E + RRA+IGLVA G+ G+ QA A+ IK+ TLNSD+ RD DLPLKERF++QPL P Sbjct: 18 SRRADSRTRTAVVIVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPP 113
BLAST of CK740213 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.118e-38 Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 3 Query: 432 SKGVSKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPK-MKTIPQEPHWKALQTIGNLDHAAKIKSTPEAEKYYAETVS 692 +K ++DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPK K ++ K TI LDHAAKIKS EAEKYY T S Sbjct: 120 AKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKS 207 HSP 2 Score: 83.1889 bits (204), Expect = 2.118e-38 Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 109 SGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSP 414 +GP R A SR+AV VRA A+ + +T RRA++GLVA G+A G+ QA LA+A PIK+ TLNSD+ RD DLPL+ERF++QPL P Sbjct: 19 AGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPP 113
BLAST of CK740213 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.118e-38 Identity = 51/88 (57.95%), Postives = 65/88 (73.86%), Query Frame = 3 Query: 432 SKGVSKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPK-MKTIPQEPHWKALQTIGNLDHAAKIKSTPEAEKYYAETVS 692 +K ++DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPK K ++ K TI LDHAAKIKS EAEKYY T S Sbjct: 120 AKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKS 207 HSP 2 Score: 83.1889 bits (204), Expect = 2.118e-38 Identity = 49/103 (47.57%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 109 SGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSP 414 +GP R A SR+AV VRA A+ + +T RRA++GLVA G+A G+ QA LA+A PIK+ TLNSD+ RD DLPL+ERF++QPL P Sbjct: 19 AGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPP 113
BLAST of CK740213 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.054e-33 Identity = 57/85 (67.06%), Postives = 68/85 (80.00%), Query Frame = 3 Query: 435 KGVSKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPK-MKTIPQEPHWKALQTIGNLDHAAKIKSTPEAEKYYAET 686 K ++DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK K +E K TI +LDHAAK+KSTPEAEKY+A T Sbjct: 117 KTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAAT 201 HSP 2 Score: 50.447 bits (119), Expect = 4.054e-33 Identity = 34/96 (35.42%), Postives = 45/96 (46.88%), Query Frame = 1 Query: 130 APSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSP 414 A S +R AV + + + P R + A +S QAV A+ IK+ TLNSD+ RD DLPLKERF++QPL P Sbjct: 20 ADSRTRTAVVVVRASAEGDRCAGGPRCDR------LVATASSPPLSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQTRDFDLPLKERFYLQPLPP 109 The following BLAST results are available for this feature:
BLAST of CK740213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740213 ID=CK740213; Name=CK740213; organism=Citrus sinensis; type=EST; length=694bpback to top |