CK740218

Overview
NameCK740218
Unique NameCK740218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length413
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:296..708. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 5.287e-65
Identity = 111/134 (82.84%), Postives = 125/134 (93.28%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGR+VLNKNIDNFFAENEMLAF+P ++VPGI +SNDKMLQ RIFAYGDTQRHRLGPNYL+LPVNAPKC + NNHYDGFMNFMHRDEEVDYFPS+YDPTRHAER+PIP+ VITGRR++  IEKE+NFKQ G+RY
Sbjct:  302 PVGRMVLNKNIDNFFAENEMLAFSPHMIVPGINFSNDKMLQTRIFAYGDTQRHRLGPNYLLLPVNAPKCAYHNNHYDGFMNFMHRDEEVDYFPSKYDPTRHAERHPIPNAVITGRRDRRVIEKEDNFKQAGDRY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA_HELAN (Catalase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.624e-64
Identity = 109/135 (80.74%), Postives = 120/135 (88.89%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLNKNIDNFFAENE LAF P I+VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNHYDGFMNFMHRDEE+DYFPSRYDP RHAE+YPIP   ++G+R+K  IEKENNFKQPGERY
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFCPAIIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHYDGFMNFMHRDEEIDYFPSRYDPARHAEQYPIPPVRLSGKRDKCVIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_WHEAT (Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 2.624e-64
Identity = 108/135 (80.00%), Postives = 120/135 (88.89%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLN+NIDNFF+ENE LAF PGI+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL+LP NAPKC H NNHYDG MNFMHRDEEVDYFPSR+DP +HA RYPIPS  + GRREK  IEKENNFKQPGERY
Sbjct:  301 QPVGRLVLNRNIDNFFSENEQLAFCPGIIVPGVYYSDDKLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCSHHNNHYDGLMNFMHRDEEVDYFPSRFDPAKHAPRYPIPSRTLNGRREKMVIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 7.634e-64
Identity = 110/135 (81.48%), Postives = 119/135 (88.15%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLNKNIDNFFAENE LAF P IVVPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEE++YFPSRYDP RHAE +PIP  V TGRREK  IEKENNFKQPGERY
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 3.789e-63
Identity = 108/135 (80.00%), Postives = 120/135 (88.89%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLNKNIDNFFAENE LAF P IVVPG+YYS+DKMLQ RIF+Y D+QRHRLGPNYL LP NAPKC H NNH++GFMNF+HRDEEV+YFPSRYDP RHAER+PIP  + +GRREK  IEKENNFKQPGERY
Sbjct:  301 QPVGRLVLNKNIDNFFAENEQLAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 6.463e-63
Identity = 108/135 (80.00%), Postives = 118/135 (87.41%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGRLVLNKNIDNF  ENE LAF P IVVPG+YYS+DKMLQ RIF+Y DTQR+RLGPNYL LP NAPKC H NNHYDG MNFMHRDEE+DYFPSRYDP RHAE+YPIPS + TG+REK  I+KENNFKQPGERY
Sbjct:  294 QPVGRLVLNKNIDNFSNENEQLAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDPVRHAEKYPIPSTMCTGKREKCVIQKENNFKQPGERY 428          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.102e-62
Identity = 105/135 (77.78%), Postives = 121/135 (89.63%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +P+GR+VLNKNIDNFFAENE LAF P ++VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP NAPKC H NNH++GFMNFMHRDEEV+YFPSRYDP RHAE++PIPS V++G+REK  I KENNFKQPGERY
Sbjct:  301 QPMGRMVLNKNIDNFFAENEQLAFCPSLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_TOBAC (Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 PE=1 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 1.102e-62
Identity = 108/134 (80.60%), Postives = 117/134 (87.31%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLN+NIDNFFAENE LAFNPG +VPG+YYS DK+LQ RIFAY DTQRHR+GPNY+ LPVNAPKC H NNH DG MNFMHRDEEVDY PSR+DP RHAE+YPIPS V+TGRRE   IEKENNFKQ GERY
Sbjct:  302 PVGRLVLNRNIDNFFAENEQLAFNPGHIVPGLYYSEDKLLQTRIFAYADTQRHRIGPNYMQLPVNAPKCAHHNNHRDGAMNFMHRDEEVDYLPSRFDPCRHAEQYPIPSRVLTGRREMCVIEKENNFKQAGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 1.102e-62
Identity = 104/135 (77.04%), Postives = 119/135 (88.15%), Query Frame = 3
Query:    9 RPVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            +PVGR+VLNKNIDNFFAENE LAF P I+VPG+YYS+DK+LQ R+F+Y DTQRHRLGPNYL LP NAPKC H NNH+DGFMNFMHRDEEV+YFPSRYDP RHAE+ P+P  ++ G+REK  IEKENNFKQPGERY
Sbjct:  301 QPVGRMVLNKNIDNFFAENEQLAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERY 435          
BLAST of CK740218 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 1.440e-62
Identity = 106/134 (79.10%), Postives = 119/134 (88.81%), Query Frame = 3
Query:   12 PVGRLVLNKNIDNFFAENEMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVNAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTRHAERYPIPSDVITGRREKACIEKENNFKQPGERY 413
            PVGRLVLN+NIDN+FAENEMLAFNP  VVPG+YYSNDK+ Q R+FAY DTQRHRLG NYL LPVNAPKCP+ NNHYDGFMNFMHRDEEVDYF SRYDP RHAE+ PIP+ + +GRREK  IEKE+NF+QPG+RY
Sbjct:  302 PVGRLVLNRNIDNWFAENEMLAFNPAHVVPGVYYSNDKLFQLRLFAYSDTQRHRLGTNYLQLPVNAPKCPYHNNHYDGFMNFMHRDEEVDYFQSRYDPVRHAEKVPIPNAICSGRREKCVIEKEDNFRQPGDRY 435          
The following BLAST results are available for this feature:
BLAST of CK740218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 140
Match NameE-valueIdentityDescription
CATA_AVIMR5.287e-6582.84Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA_HELAN2.624e-6480.74Catalase OS=Helianthus annuus PE=2 SV=1[more]
CATA1_WHEAT2.624e-6480.00Catalase-1 OS=Triticum aestivum GN=CAT1 PE=2 SV=1[more]
CATA1_GOSHI7.634e-6481.48Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA4_SOYBN3.789e-6380.00Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA1_NICPL6.463e-6380.00Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA2_GOSHI1.102e-6277.78Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA1_TOBAC1.102e-6280.60Catalase isozyme 1 OS=Nicotiana tabacum GN=CAT-1 P... [more]
CATA1_SOYBN1.102e-6277.04Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA2_RICCO1.440e-6279.10Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6713 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740218 ID=CK740218; Name=CK740218; organism=Citrus sinensis; type=EST; length=413bp
CCTCGTGCCGGCCAGTTGGACGCTTGGTCTTGAACAAGAACATCGATAAT
TTCTTTGCGGAAAATGAAATGCTTGCATTTAACCCTGGTATCGTGGTTCC
TGGGATCTACTACTCAAATGATAAGATGCTCCAATGTCGAATCTTTGCCT
ATGGTGATACCCAGAGGCATCGCCTTGGACCCAACTACTTGATGCTTCCA
GTTAATGCACCCAAATGTCCTCATCGCAACAATCATTATGATGGTTTCAT
GAATTTCATGCACAGGGATGAGGAGGTCGATTACTTTCCTTCGAGGTATG
ATCCTACTCGTCATGCTGAGAGATATCCCATTCCTTCTGATGTAATTACA
GGAAGGCGTGAGAAGGCTTGCATTGAGAAGGAAAACAACTTCAAGCAGCC
TGGAGAGAGATAC
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