CK740243

Overview
NameCK740243
Unique NameCK740243
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10240 contig Csv1_Contig10240:925..1475. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: TPT2_BRAOB (Triose phosphate/phosphate translocator, non-green plastid, chloroplastic OS=Brassica oleracea var. botrytis GN=NGTPT PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 2.994e-75
Identity = 137/183 (74.86%), Postives = 158/183 (86.34%), Query Frame = 3
Query:    3 AMFLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYSR 551
            AMFLGE PT WV+GS+IPI+GGVALASVTEVSFNWAGF SAMASNLTNQSRNVLSKKVMV K+++LDNITLFSIIT+MS  LM PVT   EG+ FTP+Y+QSAG+N++++Y +SLIAA+C+HAYQQVSYMIL RVSPVTHSVGNC           +FF+TPVS +NAFGTGIALAGVFLYSR
Sbjct:  209 AMFLGEVPTPWVIGSIIPIVGGVALASVTEVSFNWAGFLSAMASNLTNQSRNVLSKKVMVKKDDSLDNITLFSIITLMSLFLMAPVTFFSEGIKFTPSYIQSAGVNVQQIYTKSLIAALCFHAYQQVSYMILARVSPVTHSVGNCVKRVVVIVSSVIFFKTPVSPVNAFGTGIALAGVFLYSR 391          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.363e-27
Identity = 69/182 (37.91%), Postives = 108/182 (59.34%), Query Frame = 3
Query:    9 FLGEFPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIA-AICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYSR 551
            F+GE   L V  SL+PI+GG ALA++TE++FN  GF  AM SNL    RN+ SKK M  K +++  +  ++ +++MS +++ P ++ +E      A  Q+A   +   +V  ++A ++ YH Y QVSYM L ++SP+T S+GN            + F TP+  +NA G  IA+ G FLYS+
Sbjct:  206 FMGETFPLPVYLSLLPIIGGCALAAITELNFNITGFMGAMISNLAFVFRNIFSKKGM--KGKSVSGMNYYACLSMMSLVILTPFSIAVEVPQMWAAGWQNAVSQVGPNFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVASIIIFHTPIQPVNALGAAIAIFGTFLYSQ 385          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: GPT1_ARATH (Glucose-6-phosphate/phosphate translocator 1, chloroplastic OS=Arabidopsis thaliana GN=GPT1 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.780e-27
Identity = 73/182 (40.11%), Postives = 109/182 (59.89%), Query Frame = 3
Query:   12 LGE-FPTLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIA-AICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYSR 551
            LGE FPT  V  SLIPI+GG AL+++TE++FN  GF  AM SNL    RN+ SKK M  K +++  +  ++ ++++S +++ P  + +EG        Q+A   +   +V  ++A ++ YH Y QVSYM L ++SP+T SVGN            + FRTPV  +NA G  IA+ G FLYS+
Sbjct:  207 LGETFPTS-VYLSLIPIIGGCALSALTELNFNMIGFMGAMISNLAFVFRNIFSKKGM--KGKSVSGMNYYACLSMLSLLILTPFAIAVEGPQMWVDGWQTALATVGPQFVWWVVAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAILGTFLYSQ 385          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: TPT_PEA (Triose phosphate/phosphate translocator, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 9.767e-26
Identity = 69/176 (39.20%), Postives = 103/176 (58.52%), Query Frame = 3
Query:   27 TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEV-YVRSLI-AAICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYS 548
            TLW+  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  +++ I++++ I+ IP  LI+EG T        A   +  V +V  L    + YH Y QV+   L+RV+P+TH+VGN            + F   +S     GTGIA+AGV LYS
Sbjct:  217 TLWL--SLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTD----MDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLVKFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIIIFGNKISTQTGIGTGIAIAGVALYS 386          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: TPT_FLAPR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria pringlei GN=TPT PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.194e-23
Identity = 65/179 (36.31%), Postives = 102/179 (56.98%), Query Frame = 3
Query:   27 TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEVYVRSLIA-----AICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYS 548
            TLW+  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  L++ I+++S +  IP  +I+EG          A   + +V +   I+      + YH Y Q++   L+RV+P+TH+VGN            + F   +S   A GT IA+AGV +YS
Sbjct:  223 TLWL--SLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTD----MDSTNLYAYISIISLLFCIPPAIILEGPQLLKHGFSDA---IAKVGMTKFISDLFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAVYS 392          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: TPT1_BRAOB (Triose phosphate/phosphate translocator, chloroplastic OS=Brassica oleracea var. botrytis GN=TPT PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.194e-23
Identity = 66/181 (36.46%), Postives = 104/181 (57.46%), Query Frame = 3
Query:   27 TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLN--LKEVYVRSLIA-----AICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYS 548
            TLW+  SL P++ GVA+AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  +++ I++++  + +P  +I+EG       L   G N  + +V +   I+      + YH Y Q++   L+RV+P+TH+VGN            + F   +S     GTGIA+AGV LYS
Sbjct:  222 TLWL--SLAPVVLGVAMASLTELSFNWLGFISAMISNISFTYRSIFSKKAMTD----MDSTNVYAYISIIALFVCLPPAIIVEG-----PQLLKHGFNDAIAKVGMTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTGIAIAGVALYS 391          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: TPT_MAIZE (Triose phosphate/phosphate translocator, chloroplastic OS=Zea mays GN=TPT PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 2.036e-23
Identity = 63/180 (35.00%), Postives = 102/180 (56.67%), Query Frame = 3
Query:   27 TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQS------AGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYS 548
            +LW+  SL P++ GV++AS+TE+SFNW GF +AM SN++   R++ SKK M +    +D+  +++ I++++ I+ IP  LI EG    P  +Q       A + L +      +  + YH Y Q++   L+RV+P+TH+VGN            + F   +S     GT IA+AGV +YS
Sbjct:  225 SLWL--SLAPVVIGVSMASLTELSFNWTGFINAMISNISFTYRSIYSKKAMTD----MDSTNVYAYISIIALIVCIPPALIFEG----PKLMQHGFSDAIAKVGLTKFVSDLFLVGLFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTSIAIAGVAMYS 394          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: TPT_SPIOL (Triose phosphate/phosphate translocator, chloroplastic OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.011e-22
Identity = 65/181 (35.91%), Postives = 104/181 (57.46%), Query Frame = 3
Query:   27 TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLN--LKEVYVRSLIA-----AICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYS 548
            TLW+  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  +++ I++++  + +P  +I+EG       L   G N  + +V +   I+      + YH Y Q++   L+RV+P+TH+VGN            + F   +S   A GT IA+AGV LYS
Sbjct:  219 TLWL--SLAPVVIGVSMASLTELSFNWLGFISAMISNVSFTYRSLYSKKAMTD----MDSTNIYAYISIIALFVCLPPAIIVEG-----PQLMKHGFNDAIAKVGLTKFISDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIAFGNKISTQTAIGTSIAIAGVALYS 388          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: TPT_FLATR (Triose phosphate/phosphate translocator, chloroplastic OS=Flaveria trinervia GN=TPT PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.011e-22
Identity = 61/176 (34.66%), Postives = 100/176 (56.82%), Query Frame = 3
Query:   27 TLWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQSAGLNLKEV-YVRSLI-AAICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYS 548
            +LW+  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  L++ I++++ +  IP  ++ EG          A   +  + ++  L    + YH Y Q++   L+RV+P+TH+VGN            + F   +S   A GT IA+AGV +YS
Sbjct:  222 SLWL--SLAPVVIGVSMASLTELSFNWLGFISAMISNISFTYRSIYSKKAMTD----MDSTNLYAYISIIALLFCIPPAVLFEGPQLLKHGFNDAIAKVGMIKFISDLFWVGMFYHLYNQIATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTAIGTSIAIAGVAIYS 391          
BLAST of CK740243 vs. ExPASy Swiss-Prot
Match: TPT_SOLTU (Triose phosphate/phosphate translocator, chloroplastic OS=Solanum tuberosum GN=TPT PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.252e-22
Identity = 63/179 (35.20%), Postives = 99/179 (55.31%), Query Frame = 3
Query:   30 LWVVGSLIPIMGGVALASVTEVSFNWAGFWSAMASNLTNQSRNVLSKKVMVNKEEALDNITLFSIITVMSFILMIPVTLIMEGVTFTPAYLQS------AGLNLKEVYVRSLIAAICYHAYQQVSYMILQRVSPVTHSVGNCXXXXXXXXXXXMFFRTPVSAINAFGTGIALAGVFLYS 548
            LW+  SL P++ GV++AS+TE+SFNW GF SAM SN++   R++ SKK M +    +D+  +++ I++++ I  +P  + +EG    P  LQ       A + L +         + YH Y QV+   L+RV+P+TH+VGN            + F   +S     GT IA+AGV +YS
Sbjct:  230 LWL--SLAPVVLGVSMASLTELSFNWLGFTSAMISNISFTYRSIYSKKAMTD----MDSTNVYAYISIIALIFCLPPAIFIEG----PQLLQHGFNDAIAKVGLTKFVTDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVIGFSIVIFGNKISTQTGIGTCIAIAGVAIYS 398          
The following BLAST results are available for this feature:
BLAST of CK740243 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
TPT2_BRAOB2.994e-7574.86Triose phosphate/phosphate translocator, non-green... [more]
GPT2_ARATH1.363e-2737.91Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
GPT1_ARATH1.780e-2740.11Glucose-6-phosphate/phosphate translocator 1, chlo... [more]
TPT_PEA9.767e-2639.20Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLAPR1.194e-2336.31Triose phosphate/phosphate translocator, chloropla... [more]
TPT1_BRAOB1.194e-2336.46Triose phosphate/phosphate translocator, chloropla... [more]
TPT_MAIZE2.036e-2335.00Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SPIOL1.011e-2235.91Triose phosphate/phosphate translocator, chloropla... [more]
TPT_FLATR1.011e-2234.66Triose phosphate/phosphate translocator, chloropla... [more]
TPT_SOLTU2.252e-2235.20Triose phosphate/phosphate translocator, chloropla... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6738 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE67F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740243 ID=CK740243; Name=CK740243; organism=Citrus sinensis; type=EST; length=551bp
CTGCTATGTTTCTAGGGGAGTTCCCCACTCTCTGGGTTGTTGGATCTCTA
ATACCTATTATGGGTGGTGTTGCGCTTGCGTCAGTTACTGAGGTTTCTTT
TAATTGGGCTGGTTTCTGGAGTGCAATGGCTTCCAATTTGACAAACCAAT
CTCGTAATGTCCTTAGCAAAAAAGTCATGGTGAATAAAGAGGAAGCTTTG
GACAATATCACCCTGTTTTCTATAATAACAGTCATGTCTTTCATCCTGAT
GATCCCCGTGACTCTCATTATGGAAGGTGTCACGTTTACCCCTGCATACC
TACAGTCTGCTGGTTTGAATCTTAAAGAGGTTTATGTAAGGTCACTTATC
GCTGCAATCTGTTACCATGCTTATCAGCAGGTCTCTTATATGATATTACA
GAGGGTAAGCCCTGTTACCCATTCAGTAGGCAATTGTGTGAAGAGGGTGG
TGGTCATCGTGAGCTCTGTTATGTTCTTCCGAACTCCAGTCTCAGCTATC
AATGCCTTTGGCACTGGGATTGCTCTTGCTGGAGTTTTCCTGTACTCAAG
G
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