CK740294

Overview
NameCK740294
Unique NameCK740294
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13849 contig Csv1_Contig13849:826..1296. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: MCAT_ARATH (Mitochondrial carnitine/acylcarnitine carrier-like protein OS=Arabidopsis thaliana GN=BOU PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.425e-54
Identity = 84/123 (68.29%), Postives = 96/123 (78.05%), Query Frame = 3
Query:   99 FPQWHREVPGNAAMFGVYEFVKQYMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSTLG 467
            FP + REVPGNA MF  YE  K+++AGG DTS                 FW  VYPTDVVKSV+QVDDYKNP+++GS+DAF+KILKSEGVKGLYKGFGPAMARSVPANAACFLAYE+TRS+LG
Sbjct:  178 FPTFAREVPGNATMFAAYEAFKRFLAGGSDTSSLGQGSLIMAGGVAGASFWGIVYPTDVVKSVLQVDDYKNPRYTGSMDAFRKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEMTRSSLG 300          

HSP 2 Score: 58.9214 bits (141), Expect = 1.425e-54
Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 2
Query:    5 VGVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTMA 112
            V  AVKYGGP+DVA+ VLRSEGG RGLFKGL PT A
Sbjct:  147 VVAAVKYGGPMDVARHVLRSEGGARGLFKGLFPTFA 182          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.410e-18
Identity = 46/130 (35.38%), Postives = 61/130 (46.92%), Query Frame = 3
Query:   90 RAWFPQWHREVPGNAAMFGVYEFVKQYMAGGQ----DTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSTLG 467
            R + P   RE  GN A F  YE  K+Y    +    D  +                +W  +YP DV KS IQ+ +   P  S  +   K+I   EGVKGL++G+ P + RS PANAA F  YE+    LG
Sbjct:  157 RGFTPTIAREFVGNMAFFSTYETCKRYFKNKENKPNDDDELNLPALIISGGLGGMAYWTVLYPVDVAKSKIQISEGAGPSPS-IVKVLKEIYSKEGVKGLFRGYTPTIIRSFPANAAMFSVYELVIKLLG 285          

HSP 2 Score: 32.7278 bits (73), Expect = 3.410e-18
Identity = 14/31 (45.16%), Postives = 22/31 (70.97%), Query Frame = 2
Query:   20 KYGGPVDVAKRVLRSEGGLRGLFKGLVPTMA 112
            KY G +D   ++L+ EGG+RG ++G  PT+A
Sbjct:  135 KYKGSLDCLVQILK-EGGIRGAYRGFTPTIA 164          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: MCFG_DICDI (Mitochondrial substrate carrier family protein G OS=Dictyostelium discoideum GN=mcfG PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 8.688e-18
Identity = 47/121 (38.84%), Postives = 60/121 (49.59%), Query Frame = 3
Query:  114 REVPGNAAMFGVYEFVKQYMAGGQDTS--QXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQVDDY--KNPKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSTL 464
            R++P NA  FG YE  + ++A   + S  Q                +W   YP DVVKS +Q D       K+   ID   KI K +G+ G YKGF P   RSVPANAACF+ YE  R  +
Sbjct:  179 RDIPANACYFGAYELCRDFLASKDNISVNQLSSLQIMAAGGAGGVSYWTLTYPADVVKSTMQTDAIVKSQRKYKNMIDCASKIYKQQGIAGFYKGFTPCFIRSVPANAACFVLYEKARQIM 299          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: ORNT1_MOUSE (Mitochondrial ornithine transporter 1 OS=Mus musculus GN=Slc25a15 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.639e-16
Identity = 45/117 (38.46%), Postives = 59/117 (50.43%), Query Frame = 3
Query:  114 REVPGNAAMFGVYEFVKQYMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSTL 464
            REVPG    FG YE  + + A G+   +               C W +VYP D +KS IQV      K +G +  F  I+K+EG+  LY G  P M R+ PAN A FLAYE +R  +
Sbjct:  179 REVPGYFFFFGGYELSRSFFASGRSKDELGPVPLMLSGGFGGICLWLAVYPVDCIKSRIQVLSMTG-KQTGLVRTFLSIVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSRKLM 294          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: ORNT1_HUMAN (Mitochondrial ornithine transporter 1 OS=Homo sapiens GN=SLC25A15 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.639e-16
Identity = 45/117 (38.46%), Postives = 59/117 (50.43%), Query Frame = 3
Query:  114 REVPGNAAMFGVYEFVKQYMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQVDDYKNPKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSTL 464
            REVPG    FG YE  + + A G+   +               C W +VYP D +KS IQV      K +G I  F  ++K+EG+  LY G  P M R+ PAN A FLAYE +R  +
Sbjct:  179 REVPGYFFFFGGYELSRSFFASGRSKDELGPVPLMLSGGVGGICLWLAVYPVDCIKSRIQVLSMSG-KQAGFIRTFINVVKNEGITALYSGLKPTMIRAFPANGALFLAYEYSRKLM 294          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: YMC2_YEAST (Carrier protein YMC2, mitochondrial OS=Saccharomyces cerevisiae GN=YMC2 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.387e-15
Identity = 48/128 (37.50%), Postives = 61/128 (47.66%), Query Frame = 3
Query:   90 RAWFPQWHREVPGNAAMFGVYE-FVKQYMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQVDDYKNPKFSGSID-AFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSTLG 467
            R  FP   R   G    F VYE  V + +  G   ++                 W +VYP DVVKS+IQ DD + PK+  SI    K I   EG++  +KGFGP M RS P N A FL +E+    LG
Sbjct:  200 RGLFPTMIRAGHGLGTYFLVYEALVAREIGTGLTRNEIPPWKLCLFGAFSGTMLWLTVYPLDVVKSIIQNDDLRKPKYKNSISYVAKTIYAKEGIRAFFKGFGPTMVRSAPVNGATFLTFELVMRFLG 327          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: MCFL_DICDI (Mitochondrial substrate carrier family protein L OS=Dictyostelium discoideum GN=mcfL PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.125e-15
Identity = 36/106 (33.96%), Postives = 54/106 (50.94%), Query Frame = 3
Query:  135 AMFGVYEFVKQYMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQVDDYKN--PKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYE 446
            A FG YE  ++Y+   ++                   FW + +P DV++S I    Y    P++ G ID  K I + +G+KG +KGF P + R+ PAN A F+AYE
Sbjct:  174 AYFGCYELAQRYLR--REDGSMTMGRSFIAGGIAGTGFWLTNFPFDVIRSRIMTMPYNESPPRYKGMIDCAKHIYRVDGLKGFWKGFSPCLLRTFPANGATFVAYE 277          

HSP 2 Score: 31.9574 bits (71), Expect = 3.125e-15
Identity = 13/28 (46.43%), Postives = 19/28 (67.86%), Query Frame = 2
Query:   23 YGGPVDVAKRVLRSEGGLRGLFKGLVPT 106
            Y GP+D  K++     G+RGL+K L+PT
Sbjct:  143 YNGPIDCIKKI-----GIRGLYKALIPT 165          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: DIF1_CAEEL (Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 2.055e-13
Identity = 38/114 (33.33%), Postives = 56/114 (49.12%), Query Frame = 3
Query:  114 REVPGNAAMFGVYEFVKQYMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQV-DDYKNPKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVT 452
            R++P +AA   VYE++K+  +G                       W    P DV+KS +Q   + K P   G     +++L+ EG + L+KGF P M R+ PANAACF   E+T
Sbjct:  175 RDIPASAAYLSVYEYLKKKFSGEGAQRTLSPGATLMAGGLAGIANWGVCIPADVLKSRLQTAPEGKYP--DGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAACFFGLELT 286          

HSP 2 Score: 29.261 bits (64), Expect = 2.055e-13
Identity = 13/34 (38.24%), Postives = 21/34 (61.76%), Query Frame = 2
Query:    8 GVAVKYGGPVDVAKRVLRSEGGLRGLFKGLVPTM 109
            G  V Y GP+DV K+ L  +GG+  +++G   T+
Sbjct:  141 GSGVHYDGPLDVVKK-LYKQGGISSIYRGTGATL 173          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: MCAT_MACFA (Mitochondrial carnitine/acylcarnitine carrier protein OS=Macaca fascicularis GN=SLC25A20 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.057e-13
Identity = 42/121 (34.71%), Postives = 55/121 (45.45%), Query Frame = 3
Query:  114 REVPGNAAMFGVYEFVKQ-YMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQV---DDYKNPKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSTL 464
            R+VP +   F  YE+VK  +   G+  S+                 W    P DV+KS  Q      Y N    G  D  ++++  EGV  LYKGF   M R+ PANAACFL +EV    L
Sbjct:  178 RDVPASGMYFMTYEWVKNIFTPEGKRVSELSVPRVLVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPN----GFRDVLRELIPDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFL 294          

HSP 2 Score: 30.4166 bits (67), Expect = 2.057e-13
Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 2
Query:   20 KYGGPVDVAKRVLRSEGGLRGLFKGLVPTM 109
            KY G +D AK+ L  E G+RG++KG V T+
Sbjct:  148 KYTGTLDCAKK-LYQEFGIRGIYKGTVVTL 176          
BLAST of CK740294 vs. ExPASy Swiss-Prot
Match: MCAT_HUMAN (Mitochondrial carnitine/acylcarnitine carrier protein OS=Homo sapiens GN=SLC25A20 PE=1 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 2.672e-13
Identity = 41/121 (33.88%), Postives = 56/121 (46.28%), Query Frame = 3
Query:  114 REVPGNAAMFGVYEFVKQ-YMAGGQDTSQXXXXXXXXXXXXXXXCFWFSVYPTDVVKSVIQV---DDYKNPKFSGSIDAFKKILKSEGVKGLYKGFGPAMARSVPANAACFLAYEVTRSTL 464
            R+VP +   F  YE++K  +   G+  S+                 W    P DV+KS  Q      Y N    G  D  +++++ EGV  LYKGF   M R+ PANAACFL +EV    L
Sbjct:  178 RDVPASGMYFMTYEWLKNIFTPEGKRVSELSAPRILVAGGIAGIFNWAVAIPPDVLKSRFQTAPPGKYPN----GFRDVLRELIRDEGVTSLYKGFNAVMIRAFPANAACFLGFEVAMKFL 294          

HSP 2 Score: 30.0314 bits (66), Expect = 2.672e-13
Identity = 15/30 (50.00%), Postives = 21/30 (70.00%), Query Frame = 2
Query:   20 KYGGPVDVAKRVLRSEGGLRGLFKGLVPTM 109
            KY G +D AK+ L  E G+RG++KG V T+
Sbjct:  148 KYTGTLDCAKK-LYQEFGIRGIYKGTVLTL 176          
The following BLAST results are available for this feature:
BLAST of CK740294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
MCAT_ARATH1.425e-5468.29Mitochondrial carnitine/acylcarnitine carrier-like... [more]
MCFS_DICDI3.410e-1835.38Mitochondrial substrate carrier family protein S O... [more]
MCFG_DICDI8.688e-1838.84Mitochondrial substrate carrier family protein G O... [more]
ORNT1_MOUSE1.639e-1638.46Mitochondrial ornithine transporter 1 OS=Mus muscu... [more]
ORNT1_HUMAN1.639e-1638.46Mitochondrial ornithine transporter 1 OS=Homo sapi... [more]
YMC2_YEAST1.387e-1537.50Carrier protein YMC2, mitochondrial OS=Saccharomyc... [more]
MCFL_DICDI3.125e-1533.96Mitochondrial substrate carrier family protein L O... [more]
DIF1_CAEEL2.055e-1333.33Protein dif-1 OS=Caenorhabditis elegans GN=dif-1 P... [more]
MCAT_MACFA2.057e-1334.71Mitochondrial carnitine/acylcarnitine carrier prot... [more]
MCAT_HUMAN2.672e-1333.88Mitochondrial carnitine/acylcarnitine carrier prot... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6438 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740294 ID=CK740294; Name=CK740294; organism=Citrus sinensis; type=EST; length=472bp
CCAAGTTGGTGTGGCAGTGAAGTATGGTGGACCAGTGGATGTGGCTAAGC
GTGTTCTTAGATCAGAAGGCGGTCTTAGGGGTCTCTTCAAGGGCCTGGTT
CCCACAATGGCACCGTGAGGTTCCAGGGAATGCTGCCATGTTTGGTGTGT
ATGAATTTGTGAAACAGTATATGGCAGGAGGCCAAGACACCTCTCAGTTG
GGAAGAGGAGCAGTGCTTTTGGCTGGTGGTTTATCTGGAGCTTGTTTCTG
GTTCTCTGTTTACCCCACTGATGTTGTCAAGAGTGTTATTCAGGTCGATG
ATTACAAAAATCCCAAATTCTCTGGTTCCATTGATGCCTTCAAAAAGATC
CTGAAATCAGAAGGTGTCAAAGGCTTGTACAAGGGTTTCGGCCCTGCCAT
GGCCAGAAGTGTTCCTGCAAATGCTGCATGCTTCTTGGCGTATGAAGTGA
CAAGATCTACTTTGGGATGATT
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