CK740299
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740299 vs. ExPASy Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 6.905e-17 Identity = 38/47 (80.85%), Postives = 41/47 (87.23%), Query Frame = 2 Query: 320 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIA 460 +L AREAVNEVQVV DSSW+ LVI SE PVLV+FWAPWCGPCRMIA Sbjct: 58 VLLHAREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIA 104
BLAST of CK740299 vs. ExPASy Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.302e-15 Identity = 46/117 (39.32%), Postives = 64/117 (54.70%), Query Frame = 2 Query: 122 MAMKNCFQVSSVYSTRAGVVQCY----QPFSSVKKIHLPIGNGLNKXXXXXXXXXXXXXXXXXXXXXXXXILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIA 460 MA++NC Q+S+ S V+ + QP S K+++P GL + ++CKA EAV EVQ V DSSW+ V+ SE PV+V+FWAPWCGPC++IA Sbjct: 1 MAIENCLQLSTSASVGTVAVKSHVHHLQPSS---KVNVPTFRGLKRSFPALSSSVSSSSPRQFRYSS---VVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIA 111
BLAST of CK740299 vs. ExPASy Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.715e-13 Identity = 29/46 (63.04%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 323 LCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIA 460 +CK + V+EV V + +W+N+VI+ E+PVLVEFWAPWCGPCRMIA Sbjct: 60 VCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIA 105
BLAST of CK740299 vs. ExPASy Swiss-Prot
Match: TRXM2_ARATH (Thioredoxin M-type 2, chloroplastic OS=Arabidopsis thaliana GN=At4g03520 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.032e-12 Identity = 25/46 (54.35%), Postives = 39/46 (84.78%), Query Frame = 2 Query: 320 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMI 457 ++C+A+E ++QVV DS+W++LV+ + PV+V+FWAPWCGPC+MI Sbjct: 71 VVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDFWAPWCGPCKMI 116
BLAST of CK740299 vs. ExPASy Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.348e-12 Identity = 28/46 (60.87%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 323 LCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIA 460 +C+++ AV+EV V + +W+ LV++ E PVLVEFWAPWCGPCRMIA Sbjct: 51 VCQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIA 96
BLAST of CK740299 vs. ExPASy Swiss-Prot
Match: TRXM_ORYSJ (Thioredoxin M-type, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12 Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 326 CKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIA 460 C+ V+EV V + +W+++V+ SE PVLVEFWAPWCGPCRMIA Sbjct: 58 CQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIA 102
BLAST of CK740299 vs. ExPASy Swiss-Prot
Match: TRXM_BRANA (Thioredoxin M-type, chloroplastic OS=Brassica napus PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 8.734e-12 Identity = 24/46 (52.17%), Postives = 38/46 (82.61%), Query Frame = 2 Query: 320 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMI 457 I+C+A++ + +V DS+WE+LV+ ++ PV+V+FWAPWCGPC+MI Sbjct: 62 IICEAQDTATGIPMVNDSTWESLVLKADEPVVVDFWAPWCGPCKMI 107
BLAST of CK740299 vs. ExPASy Swiss-Prot
Match: TRXM1_ARATH (Thioredoxin M-type 1, chloroplastic OS=Arabidopsis thaliana GN=At1g03680 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.490e-11 Identity = 23/46 (50.00%), Postives = 37/46 (80.43%), Query Frame = 2 Query: 320 ILCKAREAVNEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMI 457 ++C+A++ + VV DS+W++LV+ ++ PV V+FWAPWCGPC+MI Sbjct: 65 VICEAQDTATGIPVVNDSTWDSLVLKADEPVFVDFWAPWCGPCKMI 110 The following BLAST results are available for this feature:
BLAST of CK740299 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740299 ID=CK740299; Name=CK740299; organism=Citrus sinensis; type=EST; length=460bpback to top |