CK740311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 7.470e-94 Identity = 145/152 (95.39%), Postives = 147/152 (96.71%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR W+S Sbjct: 211 REAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVS 362 HSP 2 Score: 63.1586 bits (152), Expect = 7.470e-94 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRY 210
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 296.204 bits (757), Expect = 4.030e-92 Identity = 139/152 (91.45%), Postives = 147/152 (96.71%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR W+S Sbjct: 202 REAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVS 353 HSP 2 Score: 63.1586 bits (152), Expect = 4.030e-92 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 172 KMGINPIMMSAGELESGNAGEPAKLIRQRY 201
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 4.032e-92 Identity = 141/152 (92.76%), Postives = 146/152 (96.05%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR W+S Sbjct: 211 REAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVS 362 HSP 2 Score: 63.1586 bits (152), Expect = 4.032e-92 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRY 210
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 8.212e-90 Identity = 142/152 (93.42%), Postives = 146/152 (96.05%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAADIIRKGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR WI+ Sbjct: 211 REAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWIT 362 HSP 2 Score: 58.151 bits (139), Expect = 8.212e-90 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KM I+PIMMSAGELESGNAGEPAKLIRQRY Sbjct: 181 KMRISPIMMSAGELESGNAGEPAKLIRQRY 210
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 1.398e-89 Identity = 137/150 (91.33%), Postives = 142/150 (94.67%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNW 543 REAADII+KGKMCCL INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG+C GIFR D V +DIVKLVDTFPGQSIDFFGALRARVYDDEVR W Sbjct: 208 REAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKW 357 HSP 2 Score: 63.1586 bits (152), Expect = 1.398e-89 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 178 KMGINPIMMSAGELESGNAGEPAKLIRQRY 207
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 1.822e-89 Identity = 136/152 (89.47%), Postives = 144/152 (94.74%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAA+IIRKG MCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ +VK+VD+FPGQSIDFFGALRARVYDDEVR W+S Sbjct: 210 REAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVS 361 HSP 2 Score: 63.1586 bits (152), Expect = 1.822e-89 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 180 KMGINPIMMSAGELESGNAGEPAKLIRQRY 209
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 286.96 bits (733), Expect = 2.378e-89 Identity = 135/152 (88.82%), Postives = 144/152 (94.74%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAA+IIRKG +CCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRARVYDDEVR W+S Sbjct: 215 REAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVS 366 HSP 2 Score: 63.1586 bits (152), Expect = 2.378e-89 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIRQRY 214
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 4.047e-89 Identity = 136/152 (89.47%), Postives = 142/152 (93.42%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAA+IIRKG MCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR DNV +D+VK+VD FPGQSIDFFGALRARVYDDEVR W+S Sbjct: 215 REAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVS 366 HSP 2 Score: 63.1586 bits (152), Expect = 4.047e-89 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 185 KMGINPIMMSAGELESGNAGEPAKLIRQRY 214
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 285.034 bits (728), Expect = 8.983e-89 Identity = 136/152 (89.47%), Postives = 142/152 (93.42%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAAD+I KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVR WIS Sbjct: 213 REAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWIS 364 HSP 2 Score: 63.1586 bits (152), Expect = 8.983e-89 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 183 KMGINPIMMSAGELESGNAGEPAKLIRQRY 212
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 8.985e-89 Identity = 139/151 (92.05%), Postives = 143/151 (94.70%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWI 546 REAADII KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR W+ Sbjct: 198 REAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWV 348 HSP 2 Score: 56.9954 bits (136), Expect = 8.985e-89 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGN GEPAKLIRQRY Sbjct: 169 KMGINPIMMSAGELESGN-GEPAKLIRQRY 197 The following BLAST results are available for this feature:
BLAST of CK740311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740311 ID=CK740311; Name=CK740311; organism=Citrus sinensis; type=EST; length=550bpback to top |