CK932592

Overview
NameCK932592
Unique NameCK932592
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1453 contig Csv1_Contig1453:1..891. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: ESYT1_RAT (Extended synaptotagmin-1 OS=Rattus norvegicus GN=Esyt1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.693e-13
Identity = 56/215 (26.05%), Postives = 98/215 (45.58%), Query Frame = 3
Query:  234 ARMTVEDSKKILPAEFY------PSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSI-IEDGGSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVPXXP 857
            AR  ++D ++I     Y      P+WV F   +K  WLN  + ++WP++ +   +L+  +V P +    P  L +  F++  LG    +  GV +        + ++L + +  +  I + +K     A    VK +   GV R+I  PL+ + P   AVS    ++  LD     +  ++  IPGLS   +  I D+I   +  P R +VP  P
Sbjct:   97 ARQLLDDEERITAETLYMSHRELPAWVSFPDVEKAEWLNKIVVQVWPFLGQYMEKLLAETVAPAVRGANPH-LQTFTFTRVELGEKPVRIIGVKVHPSQRKDQILLDLNVSYVGDLQIDVEVKKYFCKA---GVKGMQLHGVLRVILEPLIGDLPIVGAVSMFFIKRPTLDINWTGM-TNLLDIPGLSSLSDTMIMDSIAAFLVLPNRLLVPLVP 306          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: ESYT1_HUMAN (Extended synaptotagmin-1 OS=Homo sapiens GN=ESYT1 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.517e-13
Identity = 58/228 (25.44%), Postives = 104/228 (45.61%), Query Frame = 3
Query:  195 KLRSELATTIAAFARMTVEDSKKILPAEFY------PSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSIIE-DGGSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVPXXP 857
            ++R E   ++ A AR  ++D +++     Y      P+WV F   +K  WLN  + ++WP++ +   +L+  +V P +    P  L +  F++  LG    +  GV +        + ++L + +  +  I + +K     A    VK +   GV R+I  PL+ + P   AVS     +  LD     +  ++  IPGLS   +  I D+I   +  P R +VP  P
Sbjct:   93 RVRDEKERSLRA-ARQLLDDEEQLTAKTLYMSHRELPAWVSFPDVEKAEWLNKIVAQVWPFLGQYMEKLLAETVAPAVRGSNPH-LQTFTFTRVELGEKPLRIIGVKVHPGQRKEQILLDLNISYVGDVQIDVEVKKYFCKA---GVKGMQLHGVLRVILEPLIGDLPFVGAVSMFFIRRPTLDINWTGM-TNLLDIPGLSSLSDTMIMDSIAAFLVLPNRLLVPLVP 314          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: ESYT1_PONAB (Extended synaptotagmin-1 OS=Pongo abelii GN=ESYT1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.594e-13
Identity = 58/228 (25.44%), Postives = 104/228 (45.61%), Query Frame = 3
Query:  195 KLRSELATTIAAFARMTVEDSKKILPAEFY------PSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSIIE-DGGSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVPXXP 857
            ++R E   ++ A AR  ++D +++     Y      P+WV F   +K  WLN  + ++WP++ +   +L+  +V P +    P  L +  F++  LG    +  GV +        + ++L + +  +  I + +K     A    VK +   GV R+I  PL+ + P   AVS     +  LD     +  ++  IPGLS   +  I D+I   +  P R +VP  P
Sbjct:   93 RVRDEKERSLRA-ARQLLDDEEQLTAKTLYMSHRELPAWVSFPDVEKAEWLNKIVAQVWPFLGQYMEKLLAETVAPAVRGSNPH-LQTFTFTRVELGEKPLRIIGVKVHPGQRKEQILLDLNISYVGDVQIDVEVKKYFCKA---GVKGMQLHGVLRVILEPLIGDLPIVGAVSMFFIRRPTLDINWTGM-TNLLDIPGLSSLSDTMIMDSIAAFLVLPNRLLVPLVP 314          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: ESYT1_MOUSE (Extended synaptotagmin-1 OS=Mus musculus GN=Esyt1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.000e-13
Identity = 56/215 (26.05%), Postives = 97/215 (45.12%), Query Frame = 3
Query:  234 ARMTVEDSKKILPAEFY------PSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSI-IEDGGSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVPXXP 857
            AR  ++D ++I     Y      P+WV F   +K  WLN  + ++WP++ +   +L+  +V P +    P  L +  F++  LG    +  GV +        + ++L + +  +  I + +K     A    VK +   GV R+I  PL  + P   AVS    ++  LD     +  ++  IPGLS   +  I D+I   +  P R +VP  P
Sbjct:   95 ARQLLDDEERITAETLYMSHRELPAWVSFPDVEKAEWLNKIVAQVWPFLGQYMEKLLAETVAPAVRGANPH-LQTFTFTRVELGEKPLRIIGVKVHPSQRKDQILLDLNVSYVGDVQIDVEVKKYFCKA---GVKGMQLHGVLRVILEPLTGDLPIVGAVSMFFIKRPTLDINWTGM-TNLLDIPGLSSLSDTMIMDSIAAFLVLPNRLLVPLVP 304          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: ESYT3_XENTR (Extended synaptotagmin-3 OS=Xenopus tropicalis GN=esyt3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.337e-12
Identity = 48/188 (25.53%), Postives = 86/188 (45.74%), Query Frame = 3
Query:  285 PSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSIIEDGGSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVP 848
            P+WV F   +++ WLN  + ++WPY+     ++ +  VEP++       L +  F+K  LG   P+  GV           + L++Q   N  + + ++ +        VK +   G  R+I  PL+ + P   AV+    ++  LD     +  ++  IPG+SD  ++ I D I   +  P R  VP
Sbjct:  148 PAWVNFPDVERVEWLNKVVGQMWPYIGMYVEKMFQDKVEPLVRSSSAH-LKAFTFTKVHLGEKFPRINGVKSYTKNVDKREVILDLQLSYNGDVEINVEVK--KMCKAGVKGVQLHGTLRVILAPLLPDLPFVGAVTMFFIQRPHLDINWTGL-TNVLEIPGVSDFSDSMIVDMIASHLVLPNRFTVP 331          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: YKH3_SCHPO (Uncharacterized protein PYUK71.03c OS=Schizosaccharomyces pombe GN=SPAPYUK71.03c PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.746e-12
Identity = 53/190 (27.89%), Postives = 89/190 (46.84%), Query Frame = 3
Query:  312 QKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGV-SIIEDGGSGVTMELEMQWDANS-------SIILAIKTRLGVAL-----------PVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGG-----DISTIPGLSDSIEATIHDAI 809
            + +TWLN  L++ W     + SE I    + +L +  P  + S+  S+FTLGT +P+   + S  +     V M+L + +  N         I   IK ++ + L           PV ++++ FTG  R+  + L+D++P    V  +  EK    + LK +GG     DI  IPGL+  I   IH+ +
Sbjct:  219 ETVTWLNTFLQQFWYIFEPSLSERITEITDQILSENVPSFIDSMALSEFTLGTKSPRMGFIRSYPKTEEDTVMMDLRLAFSPNDISDLTGREIAACIKPKIALDLKIGKSIASAKMPVLIEDLSFTGNLRVKVK-LIDKYPYAKTVGLTFTEKPVFSYILKPLGGDKFGFDIGNIPGLTTFITEQIHNTL 407          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: ESYT2_MOUSE (Extended synaptotagmin-2 OS=Mus musculus GN=Esyt2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 50/190 (26.32%), Postives = 89/190 (46.84%), Query Frame = 3
Query:  285 PSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSIIEDG--GSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVP 848
            P+WV F   ++  WLN  ++ +WP++ +   +L + ++EP +       LS+  F+K  +G    +  GV +  +      + ++L++ +  N  I L IK     A    VK+I   G  R+I  PL+ + P   A+S     K  L+     +  ++  IPGL+   +  I D I + +  P R  VP
Sbjct:  108 PAWVHFPDTERAEWLNKTVKHMWPFICQFIEKLFRETIEPAVRGANAH-LSTFSFTKVDVGQQPLRVNGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYFCRA---GVKSIQIHGTMRVILEPLIGDMPLVGALSIFFLRKPLLEINWTGL-TNLLDIPGLNGLSDTIILDIISNYLVLPNRITVP 292          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: ESYT2_HUMAN (Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.634e-12
Identity = 49/190 (25.79%), Postives = 89/190 (46.84%), Query Frame = 3
Query:  285 PSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSIIEDG--GSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVP 848
            P+WV F   ++  WLN  ++ +WP++ +   +L + ++EP +       LS+  F+K  +G    +  GV +  +      + ++L++ +  N  I L IK     A    VK+I   G  R+I  PL+ + P   A+S     K  L+     +  ++  +PGL+   +  I D I + +  P R  VP
Sbjct:  184 PAWVHFPDTERAEWLNKTVKHMWPFICQFIEKLFRETIEPAVRGANTH-LSTFSFTKVDVGQQPLRINGVKVYTENVDKRQIILDLQISFVGNCEIDLEIKRYFCRA---GVKSIQIHGTMRVILEPLIGDMPLVGALSIFFLRKPLLEINWTGL-TNLLDVPGLNGLSDTIILDIISNYLVLPNRITVP 368          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: EST2A_XENLA (Extended synaptotagmin-2-A OS=Xenopus laevis GN=esyt2-A PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.132e-11
Identity = 51/209 (24.40%), Postives = 96/209 (45.93%), Query Frame = 3
Query:  228 AFARMTVEDSKKILPAEFYPSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSIIEDG--GSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVP 848
            AF     +  K  + +   P+WV F   ++  WLN  ++ +WPY+ +   +L + ++EP +       LS+  F+K  +G+   +  GV +  +      + ++L++ +   + I L +K     A    VK+I   G  R+I  PL+ + P   A+S     K  L+     +  ++  +PGL+   +  I D I + +  P R  VP
Sbjct:   93 AFLENEEKSVKHHIASTDLPAWVHFPDIERAEWLNKTVKHMWPYICQFIEKLFRETIEPAVRGANAH-LSTFNFTKIDMGSQPLRINGVKVYTENVDKRQIILDLQISFVGETEIDLEVKRYFCRA---GVKSIQLHGTMRVILEPLIGDVPIVGALSIFFLRKPLLEINWTGL-TNMLDMPGLNGLSDTIILDIISNYLVLPNRITVP 296          
BLAST of CK932592 vs. ExPASy Swiss-Prot
Match: EST2B_XENLA (Extended synaptotagmin-2-B OS=Xenopus laevis GN=esyt2-B PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.478e-11
Identity = 48/190 (25.26%), Postives = 90/190 (47.37%), Query Frame = 3
Query:  285 PSWVVFSHRQKLTWLNHHLEKLWPYVNEAASELIKSSVEPVLEQYRPFILSSLKFSKFTLGTVAPQFTGVSIIEDG--GSGVTMELEMQWDANSSIILAIKTRLGVALPVQVKNIGFTGVFRLIFRPLVDEFPGFAAVSYSLREKKKLDFTLKVVGGDISTIPGLSDSIEATIHDAIEDXITWPVRKIVP 848
            P+WV F   ++  WLN  ++ +WPY+ +   +L + ++EP +       LS+  F+K  +G+   +  GV +  +      + ++L++ +   + I L +K     A    VK+I   G  R+I  PL+ + P   A+S     K  L+     +  ++  +PGL+   +  I D I + +  P R  VP
Sbjct:  116 PAWVHFPDIERAEWLNKTVKHMWPYICQFIEKLFRETIEPAVRGANAH-LSTFSFTKIDMGSQPLRINGVKVYTENVDKRQIILDLQISFVGETEIDLEVKRYFCRA---GVKSIQLHGTMRVILEPLIGDVPIVGALSIFFLRKPLLEINWTGL-TNMLDMPGLNGLSDTIILDIISNYLVLPNRITVP 300          
The following BLAST results are available for this feature:
BLAST of CK932592 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
ESYT1_RAT2.693e-1326.05Extended synaptotagmin-1 OS=Rattus norvegicus GN=E... [more]
ESYT1_HUMAN3.517e-1325.44Extended synaptotagmin-1 OS=Homo sapiens GN=ESYT1 ... [more]
ESYT1_PONAB4.594e-1325.44Extended synaptotagmin-1 OS=Pongo abelii GN=ESYT1 ... [more]
ESYT1_MOUSE6.000e-1326.05Extended synaptotagmin-1 OS=Mus musculus GN=Esyt1 ... [more]
ESYT3_XENTR1.337e-1225.53Extended synaptotagmin-3 OS=Xenopus tropicalis GN=... [more]
YKH3_SCHPO1.746e-1227.89Uncharacterized protein PYUK71.03c OS=Schizosaccha... [more]
ESYT2_MOUSE6.634e-1226.32Extended synaptotagmin-2 OS=Mus musculus GN=Esyt2 ... [more]
ESYT2_HUMAN6.634e-1225.79Extended synaptotagmin-2 OS=Homo sapiens GN=ESYT2 ... [more]
EST2A_XENLA1.132e-1124.40Extended synaptotagmin-2-A OS=Xenopus laevis GN=es... [more]
EST2B_XENLA1.478e-1125.26Extended synaptotagmin-2-B OS=Xenopus laevis GN=es... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_H04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_H04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932592 ID=CK932592; Name=CK932592; organism=Citrus sinensis; type=EST; length=891bp
GGGGACAGAAGAAAGAGAAGAACAGCTCTTCTTCTAACTTCTTCCAACTC
CCGAAACCAACCGCAGGGACTCACAGATAGATAGTTACTGAATTTCTCGC
GAGCAAAATGGGATTTGTTTTCGGGCTAGTTGTCGGGCTAGTGGTCGGGC
TTGGAATTGTCGTCGGATTCGTGCGATCGGAGAATGCGCGATCCAAGCTC
CGCTCTGAACTTGCAACAACAATAGCGGCGTTTGCACGGATGACAGTGGA
AGATTCTAAAAAGATCTTGCCGGCCGAGTTCTATCCATCTTGGGTGGTCT
TCTCGCATCGCCAGAAGTTGACTTGGCTTAATCATCATCTTGAGAAGCTC
TGGCCCTATGTCAATGAGGCAGCTTCTGAGCTGATAAAGTCATCGGTAGA
GCCAGTGCTAGAACAATATAGGCCGTTTATATTGTCTTCTCTCAAGTTTT
CCAAATTCACTCTTGGTACCGTTGCGCCCCAATTTACAGGAGTTTCAATT
ATTGAAGACGGAGGCAGTGGCGTTACCATGGAGTTGGAAATGCAGTGGGA
TGCTAATTCAAGTATAATACTTGCAATCAAGACCAGACTTGGGGTGGCGC
TACCTGTGCAGGTGAAAAACATTGGATTCACTGGAGTTTTCAGATTGATC
TTTAGGCCGCTAGTGGACGAATTTCCTGGCTTTGCAGCTGTTAGTTATTC
TCTAAGAGAGAAGAAAAAGTTGGATTTTACACTTAAAGTTGTTGGTGGTG
ACATATCAACTATTCCTGGACTTTCTGATTCTATTGAGGCAACCATACAT
GATGCAATTGAAGACTNCATCACTTGGCCAGTTAGGAAAATTGTTCCTNN
NNTGCCTGGGGATTACAGTGAACTTGAGTTGAAGCCCGTGG
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