CK932613

Overview
NameCK932613
Unique NameCK932613
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig362 contig Csv1_Contig362:1..659. BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins
Homology
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BLAST of CK932613 vs. ExPASy Swiss-Prot
Match: UCR11_SOLTU (Ubiquinol-cytochrome c reductase complex 6.7 kDa protein OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.373e-12
Identity = 33/51 (64.71%), Postives = 44/51 (86.27%), Query Frame = 1 
Query:  124 MLKFLKPKSRLQPVDVQAAAFWGVAAVSGALYLIQPFDWLKKTFLEKSEEK 276
            + KFL+PK R Q  D+QAAA WGVAAV+GAL++IQP+D+L+KTF+EK EE+
Sbjct:   11 LFKFLRPKLRPQSTDIQAAAGWGVAAVTGALWVIQPWDFLRKTFIEKQEEE 61
The following BLAST results are available for this feature:
BLAST of CK932613 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
UCR11_SOLTU1.373e-1264.71Ubiquinol-cytochrome c reductase complex 6.7 kDa p... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004531_F06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_F06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932613 ID=CK932613; Name=CK932613; organism=Citrus sinensis; type=EST; length=660bp
GGGGGAAGGAAAAACGTTGGATTGGTGGTCATTGACATTGGCATTCGACG
AACAAAGATTTGGTGCATTAAAAAGCTTGGTTAGGGTTTATAGATCCAAG
AAGAAATGGTAGGCGAAGCTTCGATGTTGAAGTTTCTGAAGCCGAAGTCG
CGTCTGCAACCCGTAGACGTACAGGCCGCCGCCTTCTGGGGTGTTGCTGC
TGTGTCCGGTGCTCTTTACCTCATCCAACCATTTGATTGGTTGAAGAAGA
CCTTTTTGGAGAAGTCTGAAGAAAAATAAAATTGACGTTGACGATCCGGT
GAAGCTTTTTGATGTCTGCTTTTGGGTTGTGGATGAGAAGAACATGGACA
TATTTGTTCTGAAATAATGTAGTTTCATTTTCTACTTCATGTCCTAAGGC
CTTTTGGCATTTAACTTTTGAGAATATTTGATTTGCTCAGACCCGCAAGT
TTGTGTTAATTTTCATTGAAATTTCTTCGTGAGCATTCTCGCGCCCTTTC
TCCTTAAAAAGGAAGCGATAAAATTCTTTTTCTTTCATTGGAAAAAAAAA
AANNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTTCCCAAAAANNNNAAAAA
AAAAAAAAAA
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