CK932640

Overview
NameCK932640
Unique NameCK932640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10863 contig Csv1_Contig10863:173..1055. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: ARA4_ARATH (Ras-related protein ARA-4 OS=Arabidopsis thaliana GN=ARA-4 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.020e-70
Identity = 128/187 (68.45%), Postives = 160/187 (85.56%), Query Frame = 3
Query:  150 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 710
            +++R E+YLFK+V+IGDSAVGKSNLL R+AR+EF PNSK+TIGVEFQTQ M I+GKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+R  TF+++GRWL+EL+THSD  V  +L+GNK DL+  R V+  EGK+LAE++GLFFMETSALDS+NV  AF+ V+ EIY+ +SRK + S   K++
Sbjct:    4 DDERGEEYLFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRSSTFENVGRWLDELNTHSDTTVAKMLIGNKCDLESIRAVSVEEGKSLAESEGLFFMETSALDSTNVKTAFEMVIREIYSNISRKQLNSDSYKEE 190          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: ARA1_ARATH (Ras-related protein ARA-1 OS=Arabidopsis thaliana GN=ARA-1 PE=2 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.805e-69
Identity = 129/188 (68.62%), Postives = 158/188 (84.04%), Query Frame = 3
Query:  147 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK 710
            S+++  E+YLFK+V+IGDSAVGKSNLL+R+AR+EF  NSK+TIGVEFQTQ M+I GKEVKAQIWDTAGQERFRAVTSAYYRGAVGAL+VYDI+RR TF+S+GRWL+EL  HSD  V  +LVGNK DL++ R V+  EGKALAE +GLFF+ETSALDS+NV  AF+ V+ +IYN +SRK + S   K +
Sbjct:    3 SDDEGREEYLFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALVVYDITRRTTFESVGRWLDELKIHSDTTVARMLVGNKCDLENIRAVSVEEGKALAEEEGLFFVETSALDSTNVKTAFEMVILDIYNNVSRKQLNSDTYKDE 190          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RB11A_LOTJA (Ras-related protein Rab11A OS=Lotus japonicus GN=RAB11A PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.981e-65
Identity = 124/202 (61.39%), Postives = 163/202 (80.69%), Query Frame = 3
Query:  144 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK-QKDSSSFNGKTVVL 746
            Y + +   DY+FKVVLIGDSAVGKS +LARFAR+EF  +SKSTIGVEFQT+ + I+ K VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL  H+D N+V IL+GNK DL + R+V T + K  AE +GLFF+ETSAL+++NV +AF TV+TEIYNI+++K + + E +   +S+S +G+ +++
Sbjct:    7 YGDANAKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKSTIGVEFQTRTLVIDHKTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRNHADKNIVIILIGNKCDLVNQRDVPTEDAKEFAEKEGLFFLETSALEATNVESAFTTVLTEIYNIVNKKSLAADESQGNGNSASLSGQKIII 208          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.524e-64
Identity = 117/181 (64.64%), Postives = 149/181 (82.32%), Query Frame = 3
Query:  156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQE 698
            D   DYLFK+VLIGDS VGKSN+L+RF R+EF   SKSTIGVEF T+ + + GK VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL  H+D N+V ++ GNKSDLK  R V+  +G+ALAE +GL F+ETSAL++ N+  AFQT++TEIY+I+S+K + +QE
Sbjct:    6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQE 186          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 1.253e-63
Identity = 118/195 (60.51%), Postives = 152/195 (77.95%), Query Frame = 3
Query:  156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGKTV 740
            D   DYLFK+VLIGDS VGKSN+L+RF R+EF   SKSTIGVEF T+ + + GK VKAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++RQTFD++ RWL EL  H+D N+V ++ GNKSDL   R V+  +G AL+E +GL F+ETSAL+++N+  AFQT++TEIY+I+S+K + +QE     S    G T+
Sbjct:    6 DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTI 200          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RGP1_ORYSJ (Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1 PE=2 SV=2)

HSP 1 Score: 241.891 bits (616), Expect = 3.644e-63
Identity = 123/192 (64.06%), Postives = 153/192 (79.69%), Query Frame = 3
Query:  144 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSS 719
            Y E  +  DY+FKVVLIGDSAVGKS LLARFAR+EF  +SK+TIGVEFQT+ + I+ + VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQ+FD + RWL EL  H+D N+V +L+GNKSDL   R V T + K  AE + LFFMETSAL+S+NV  AF TV+TEIY I+S+K +++ E  + DSS
Sbjct:    8 YGEVGQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKNIVIMLIGNKSDLGTLRVVPTEDAKEFAERENLFFMETSALESTNVENAFMTVLTEIYRIVSKKNLVANE--EVDSS 197          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 8.119e-63
Identity = 118/202 (58.42%), Postives = 160/202 (79.21%), Query Frame = 3
Query:  144 YSEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK-DSSSFNGKTVVL 746
            Y +  +  DY+FKVVLIGDSAVGKS +LARFAR+EF  +SK+TIGVEFQT+ + I  K VKAQIWDTAGQER+RAVTSAYYRGAVGA+LVYDI++RQTFD I RWL EL  H+D N+V +L+GNK+DL+D R V T + K  A+ +GLFF+ETSA++++N+  AF TV+TEI+NI+++K + + + +   + +S  GK +++
Sbjct:    5 YGDASQKIDYVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETSAMEATNLEDAFLTVLTEIFNIVNKKNLAADDNQSNGNPASLTGKKILV 206          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RB11A_RAT (Ras-related protein Rab-11A OS=Rattus norvegicus GN=Rab11a PE=1 SV=3)

HSP 1 Score: 240.35 bits (612), Expect = 1.060e-62
Identity = 121/191 (63.35%), Postives = 150/191 (78.53%), Query Frame = 3
Query:  156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFN 728
            D   DYLFKVVLIGDS VGKSNLL+RF R+EF   SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++  T++++ RWL EL  H+D N+V +LVGNKSDL+  R V T E +A AE  GL F+ETSALDS+NV AAFQT++TEIY I+S+K M   + ++ D S  N
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRENDMSPSN 193          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RB11A_RABIT (Ras-related protein Rab-11A OS=Oryctolagus cuniculus GN=RAB11A PE=2 SV=3)

HSP 1 Score: 240.35 bits (612), Expect = 1.060e-62
Identity = 121/191 (63.35%), Postives = 150/191 (78.53%), Query Frame = 3
Query:  156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFN 728
            D   DYLFKVVLIGDS VGKSNLL+RF R+EF   SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++  T++++ RWL EL  H+D N+V +LVGNKSDL+  R V T E +A AE  GL F+ETSALDS+NV AAFQT++TEIY I+S+K M   + ++ D S  N
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRENDMSPSN 193          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RB11A_PONAB (Ras-related protein Rab-11A OS=Pongo abelii GN=RAB11A PE=2 SV=3)

HSP 1 Score: 240.35 bits (612), Expect = 1.060e-62
Identity = 121/191 (63.35%), Postives = 150/191 (78.53%), Query Frame = 3
Query:  156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFN 728
            D   DYLFKVVLIGDS VGKSNLL+RF R+EF   SKSTIGVEF T+ + ++GK +KAQIWDTAGQER+RA+TSAYYRGAVGALLVYDI++  T++++ RWL EL  H+D N+V +LVGNKSDL+  R V T E +A AE  GL F+ETSALDS+NV AAFQT++TEIY I+S+K M   + ++ D S  N
Sbjct:    5 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQM--SDRRENDMSPSN 193          
The following BLAST results are available for this feature:
BLAST of CK932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARA4_ARATH4.020e-7068.45Ras-related protein ARA-4 OS=Arabidopsis thaliana ... [more]
ARA1_ARATH5.805e-6968.62Ras-related protein ARA-1 OS=Arabidopsis thaliana ... [more]
RB11A_LOTJA2.981e-6561.39Ras-related protein Rab11A OS=Lotus japonicus GN=R... [more]
RB2BV_BETVU2.524e-6464.64Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB... [more]
RB11C_LOTJA1.253e-6360.51Ras-related protein Rab11C OS=Lotus japonicus GN=R... [more]
RGP1_ORYSJ3.644e-6364.06Ras-related protein RGP1 OS=Oryza sativa subsp. ja... [more]
RB11D_TOBAC8.119e-6358.42Ras-related protein Rab11D OS=Nicotiana tabacum GN... [more]
RB11A_RAT1.060e-6263.35Ras-related protein Rab-11A OS=Rattus norvegicus G... [more]
RB11A_RABIT1.060e-6263.35Ras-related protein Rab-11A OS=Oryctolagus cunicul... [more]
RB11A_PONAB1.060e-6263.35Ras-related protein Rab-11A OS=Pongo abelii GN=RAB... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_D01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932640 ID=CK932640; Name=CK932640; organism=Citrus sinensis; type=EST; length=883bp
GGGGTTACTGGTTTTGATTGTACCACTCAATACTACATTCAGAAGAAAGT
TGGTCCCTGAAAAGATCTACAACCCAGAAGTCTATTTGTTTGCCCATATG
GATCAATAGTGTAAGAATTCTGTGAAAGTAGAAAATGGCTTTTTATTCTG
AGGAGGACAGAGCTGAGGATTATCTTTTCAAGGTTGTTCTAATTGGTGAT
TCAGCTGTTGGGAAATCAAATTTGCTCGCTAGATTTGCAAGAGATGAGTT
CTACCCGAATTCAAAATCGACCATCGGAGTGGAATTCCAAACCCAAAAGA
TGGATATCAATGGAAAGGAGGTTAAGGCACAGATCTGGGACACAGCAGGT
CAGGAACGGTTCAGGGCTGTTACATCTGCGTACTACAGGGGTGCAGTTGG
AGCTCTCTTGGTCTATGACATTAGTAGACGACAGACATTTGATAGCATTG
GCAGATGGCTTAATGAACTTCACACTCACTCAGATATGAATGTAGTAACC
ATACTTGTGGGCAACAAGTCGGATCTCAAAGACGCGAGGGAGGTAACTAC
TGCAGAAGGCAAGGCCTTGGCAGAGGCACAGGGTTTATTTTTCATGGAGA
CTTCAGCTCTTGATTCCTCAAATGTAACTGCTGCCTTTCAGACTGTCGTC
ACAGAGATTTACAATATACTAAGCCGGAAAGTTATGATATCTCAAGAGCT
GAAGCAAAAGGATTCTTCCTCATTCAACGGGAAGACAGTAGTTTTAGAAG
GAGAAAAGAAGGAAGCAGATGCCGAGCCAAAAAAAGCTGGGTGTTGTTCA
TCTTAAAGATGTGATGCTTGCTCAAGCTCAACATCTGATCTGTGTGCTGC
TGAAATACTCTTAGCTCAGACATGCCACTGAAA
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