CK932641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP1_SINAL (Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.317e-32 Identity = 69/87 (79.31%), Postives = 78/87 (89.66%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 MAS DVE+RCFVGGLA A T D +L AFS YG++L+SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWA--TDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP1_DAUCA (Glycine-rich RNA-binding protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.333e-32 Identity = 69/84 (82.14%), Postives = 75/84 (89.29%), Query Frame = 2 Query: 86 ADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 A+VE+RCFVGGLA A T D SL +AFS +GDI +SKIINDRETGRSRGFGFVTF+DEKSMRDAIEGMNGQ LDGRNITVNEAQ Sbjct: 2 AEVEYRCFVGGLAWA--TNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQ 83
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP7_ARATH (Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana GN=GRP7 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.390e-32 Identity = 67/87 (77.01%), Postives = 78/87 (89.66%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 MAS DVE+RCFVGGLA A T D +L AF+ YGD+++SKIINDRETGRSRGFGFVTF+DEK+M+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASGDVEYRCFVGGLAWA--TDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP2_SINAL (Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.668e-31 Identity = 67/87 (77.01%), Postives = 78/87 (89.66%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 MAS DVE+RCFVGGLA A T + SL AFS +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAIEGMNGQ+LDGR+ITVNEAQ Sbjct: 1 MASPDVEYRCFVGGLAWA--TDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRPA_MAIZE (Glycine-rich RNA-binding, abscisic acid-inducible protein OS=Zea mays GN=RAB15 PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 9.988e-29 Identity = 63/87 (72.41%), Postives = 74/87 (85.06%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 MA+ADVE+RCFVGGLA A T++ SL AF++YG+IL+SK+I DRETGRSRGFGFVTF E SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWA--TSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP_HORVU (Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare GN=blt801 PE=1 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.796e-28 Identity = 62/84 (73.81%), Postives = 70/84 (83.33%), Query Frame = 2 Query: 86 ADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 ADVE+RCFVGGL A T D SL AFS YGD+++SKII DRETGRSRGFGFVTF +++MR AIE MNGQ+LDGRNITVNEAQ Sbjct: 2 ADVEYRCFVGGLRWA--TDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQ 83
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP8_ARATH (Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana GN=GRP8 PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.442e-27 Identity = 60/84 (71.43%), Postives = 71/84 (84.52%), Query Frame = 2 Query: 86 ADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 ++VE+RCFVGGLA A T D L FS +GD+++SKIINDRE+GRSRGFGFVTF+DEK+MRDAIE MNG+ LDGR ITVNEAQ Sbjct: 2 SEVEYRCFVGGLAWA--TNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP10_BRANA (Glycine-rich RNA-binding protein 10 OS=Brassica napus GN=GRP10 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.884e-27 Identity = 59/84 (70.24%), Postives = 72/84 (85.71%), Query Frame = 2 Query: 86 ADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 ++VE+RCFVGGLA A T D+ L FS +G++++SKIINDRETGRSRGFGFVTF+DEKSM+DAI+ MNG+ LDGR ITVNEAQ Sbjct: 2 SEVEYRCFVGGLAWA--TGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVNEAQ 83
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP2_SORBI (Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor GN=GRP2 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.213e-27 Identity = 59/87 (67.82%), Postives = 73/87 (83.91%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 MA+ADVE+RCFVGGLA A T + +L +AF+ +G +++SK+I DRETGRSRGFGFVTF E+SM DAIE MNG+ LDGRNITVN+AQ Sbjct: 1 MAAADVEYRCFVGGLAWA--TNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQ 85
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: GRP1_SORBI (Glycine-rich RNA-binding protein 1 (Fragment) OS=Sorghum bicolor GN=GRP1 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21 Identity = 50/64 (78.12%), Postives = 56/64 (87.50%), Query Frame = 2 Query: 146 SSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 +SLH AFS YG++LESKII DRET RSRGFGFVTF E++MR AIEGMNG+ LDGRNITVNEAQ Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQ 64 The following BLAST results are available for this feature:
BLAST of CK932641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932641 ID=CK932641; Name=CK932641; organism=Citrus sinensis; type=EST; length=747bpback to top |