CK932661

Overview
NameCK932661
Unique NameCK932661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length805
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932661_ssr8 microsatellite CK932661_ssr8:8..39. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK932661 vs. ExPASy Swiss-Prot
Match: IMK3_ARATH (Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.065e-18
Identity = 54/125 (43.20%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  419 QSKNGGEEGETEDLVTFRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGEAH 793
            +++ GGE G    LV F G    T  D+L A  E++GKS YGT+YKA L+    V + R LR   T   KEF + I +LG IRHPNL+ L  +Y GP+GEKL+V  +  RG+LA  +     + H
Sbjct:  461 EAEAGGETGGK--LVHFDGPMAFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKR-LREKITKSQKEFENEINVLGRIRHPNLLALRAYYLGPKGEKLVVFDYMSRGSLATFLHARGPDVH 582          
BLAST of CK932661 vs. ExPASy Swiss-Prot
Match: TMKL1_ARATH (Putative kinase-like protein TMKL1 OS=Arabidopsis thaliana GN=TMKL1 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.391e-18
Identity = 53/125 (42.40%), Postives = 73/125 (58.40%), Query Frame = 2
Query:  368 RKRLPKEHDHNDLEINQQSKNGGE-EGETEDLVTFRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPF 739
            +KR       +DLE   +    GE EG    LV F+GGE+LT+ D+L+A G+V+ K++YGT+YKA L   G++ L       C  R      +I  LG IRH NLVPL  FY G RGEKL+++ +
Sbjct:  326 KKRKSSIESEDDLEEGDEEDEIGEKEGGEGKLVVFQGGENLTLDDVLNATGQVMEKTSYGTVYKAKLSDGGNIALRLLREGTCKDRSSCL-PVIRQLGRIRHENLVPLRAFYQGKRGEKLLIYDY 449          
BLAST of CK932661 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.079e-14
Identity = 49/110 (44.55%), Postives = 63/110 (57.27%), Query Frame = 2
Query:  431 GGEEGETEDLVTFRGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLA 760
            GGE G    LV F G    T  D+L A  E++GKS YGT YKA L+    V + R LR   T   KEF   +  LG IRH NL+ L  +Y GP+GEKL+V  +  +G+L+
Sbjct:  514 GGEMGGK--LVHFDGPFVFTADDLLCATAEIMGKSTYGTAYKATLEDGNEVAVKR-LREKTTKGVKEFEGEVTALGKIRHQNLLALRAYYLGPKGEKLLVFDYMSKGSLS 620          
BLAST of CK932661 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.490e-12
Identity = 48/137 (35.04%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  377 LPKEHDHNDLEINQQSKNGGEEGETEDLVTFRGGE-DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSG 784
            LP     +  E+   S   G E E   LV   GG     + D+L A  EV+GK + GT YKA+L+  G+  +++ L+ V  ++ KEF   +E++G I+HPN++PL  +Y   + EKL+V  F   G+L+  + G  G
Sbjct:  307 LPPGASSSKEEVTGTSSGMGGETERNKLVFTEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLE-EGTTVVVKRLKDVMASK-KEFETQMEVVGKIKHPNVIPLRAYYYS-KDEKLLVFDFMPTGSLSALLHGSRG 440          
BLAST of CK932661 vs. ExPASy Swiss-Prot
Match: Y5830_ARATH (Probable inactive receptor kinase At5g58300 OS=Arabidopsis thaliana GN=At5g58300 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 9.659e-12
Identity = 45/125 (36.00%), Postives = 74/125 (59.20%), Query Frame = 2
Query:  416 QQSKNGGEEGETEDLVTFRG-GEDLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCI-RHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSG 784
            Q+  +G +E E   LV F G   +  + D+L A  EV+GK +YGT YKA+L+ S +V +++ L+ V   + +EF   +E++  +  HP++VPL  +Y   + EKL+V  +Y  GNL+  + G  G
Sbjct:  327 QEFGSGVQEPEKNKLVFFNGCSYNFDLEDLLRASAEVLGKGSYGTAYKAVLEESTTV-VVKRLKEVAAGK-REFEQQMEIISRVGNHPSVVPLRAYYYS-KDEKLMVCDYYPAGNLSSLLHGNRG 448          
BLAST of CK932661 vs. ExPASy Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.810e-11
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 2
Query:  497 DILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSG 784
            D+L A  EV+GK  +GT YKA+L     V + R L+ V    DKEF + IEL+G + H NLVPL  +Y   R EKL+V+ F   G+L+  + G  G
Sbjct:  368 DLLRASAEVLGKGTFGTAYKAVLDAVTVVAVKR-LKDVMMA-DKEFKEKIELVGAMDHENLVPLRAYYFS-RDEKLLVYDFMPMGSLSALLHGNRG 460          
BLAST of CK932661 vs. ExPASy Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.261e-11
Identity = 37/97 (38.14%), Postives = 62/97 (63.92%), Query Frame = 2
Query:  497 DILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIRHPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGSGE 787
            D+L A  EV+GK  +GT YKA+L+ + SV + R L+ V   + ++F   +E++G I+H N+V L  +Y   + EKL+V+ ++ RG++A  + G  GE
Sbjct:  334 DLLRASAEVLGKGTFGTTYKAVLEDATSVAVKR-LKDVAAGK-RDFEQQMEIIGGIKHENVVELKAYYYS-KDEKLMVYDYFSRGSVASLLHGNRGE 427          
BLAST of CK932661 vs. ExPASy Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.177e-11
Identity = 42/120 (35.00%), Postives = 70/120 (58.33%), Query Frame = 2
Query:  428 NGGEEGETEDLVTFRGGE-DLTICDILDAPGEVIGKSNYGTLYKALLQRSGSVRLLRFLRPVCTTRDKEFGDLIELLGCIR-HPNLVPLLGFYAGPRGEKLIVHPFYKRGNLAQCIRGGS 781
            +G +E E   LV F G   +  + D+L A  EV+GK +YGT YKA+L+  G+  +++ L+ V   + +EF   +E +G I  H N+ PL  +Y   + EKL+V+ +Y+ GN +  + G +
Sbjct:  314 SGVQEAEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTTYKAILE-EGTTVVVKRLKEVAAGK-REFEQQMEAVGRISPHVNVAPLRAYYFS-KDEKLLVYDYYQGGNFSMLLHGNN 430          
The following BLAST results are available for this feature:
BLAST of CK932661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
IMK3_ARATH1.065e-1843.20Probable leucine-rich repeat receptor-like protein... [more]
TMKL1_ARATH1.391e-1842.40Putative kinase-like protein TMKL1 OS=Arabidopsis ... [more]
IMK2_ARATH2.079e-1444.55Probably inactive leucine-rich repeat receptor-lik... [more]
Y2267_ARATH1.490e-1235.04Probable inactive receptor kinase At2g26730 OS=Ara... [more]
Y5830_ARATH9.659e-1236.00Probable inactive receptor kinase At5g58300 OS=Ara... [more]
Y1848_ARATH2.810e-1143.75Probable inactive receptor kinase At1g48480 OS=Ara... [more]
Y4374_ARATH6.261e-1138.14Probable inactive receptor kinase At4g23740 OS=Ara... [more]
Y3868_ARATH8.177e-1135.00Probable inactive receptor kinase At3g08680 OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004531_B09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932661 ID=CK932661; Name=CK932661; organism=Citrus sinensis; type=EST; length=805bp
GGGGGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTTTCTTGA
TCCAAACTCAAAGTCCTAACTACTCACGTTATTTTTTTTTCTTTTTTCGG
AATTAACATAAAATCTTGGGTTCCGCACCCCTGCAACAAAGTTCACATCT
ATCTTCATCTCCTTGTCCTGTTTTATTTGATATCTTTTTTCCTCATAGCT
CAACTCAAAGCTTCCACTTTTCAATCTCTTACACATTACCCAGATCTTGT
TTCTTTGTAAAAGTTTTGAATTTGCATGAAATGAGACATACCCACATGCT
GAAACTAGTTCTAGGACTAGCTTTAGCAACTCTTTTGATCATTTTGATCC
TAATCTTCTTCTTTTACCGCAAAAGATTACCCAAAGAGCATGACCATAAT
GACCTGGAAATCAACCAACAGAGCAAAAATGGGGGAGAAGAAGGAGAAAC
AGAGGACCTTGTGACTTTTCGAGGAGGTGAGGACCTTACAATTTGTGACA
TTCTTGATGCTCCTGGTGAAGTGATTGGTAAATCAAATTATGGCACTTTG
TACAAGGCCTTGTTGCAGAGGAGTGGCTCAGTGAGGTTGCTGAGGTTCTT
GAGGCCTGTTTGTACTACCAGAGATAAAGAGTTTGGTGATCTGATTGAGC
TTTTGGGGTGTATTAGGCACCCCAATTTGGTGCCTCTTTTGGGGTTTTAT
GCTGGCCCCAGAGGCGAAAAGCTGATTGTTCATCCGTTTTATAAGCGTGG
GAATCTGGCTCAGTGTATTAGAGGTGGAAGTGGTGAGGCTCACAAATGGT
CCATA
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