CK932690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_ORYSJ (DNA polymerase alpha catalytic subunit OS=Oryza sativa subsp. japonica GN=Os01g0868300 PE=2 SV=2) HSP 1 Score: 366.696 bits (940), Expect = 8.126e-101 Identity = 183/250 (73.20%), Postives = 212/250 (84.80%), Query Frame = 1 Query: 4 VLCCESSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVKETKMAKQRINHGVEDRNVEELTNEDANFDNDTSHNDR 753 VL ESSERALLNRLMIEL KLD DVLVGHNISGFDLDVLLHRAQ C+VPS+MWSKIGRL+RS MP+L KG T++GSGASPGIMSCIAGRLLCDT+LCSRDLL+EVSYSLTQLA+TQL K+RKEV PHD+ MFQ+ +L++L+EYGETDA L++ELMFHLSVLPLTRQLTNISGNLWGKTLQG+RAQRVEYLLLHAFHA+K+IVPDKF KE K+++N E +E D + D++ H D+ Sbjct: 650 VLALESSERALLNRLMIELSKLDCDVLVGHNISGFDLDVLLHRAQTCKVPSNMWSKIGRLRRSVMPRLTKGNTLYGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAETQLKKERKEVSPHDIPPMFQSSGALLKLVEYGETDACLALELMFHLSVLPLTRQLTNISGNLWGKTLQGSRAQRVEYLLLHAFHARKFIVPDKFARSKEFNSTKRKMNPDTEAARPDE---ADPSIDDEGHHVDQ 896
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_ARATH (DNA polymerase alpha catalytic subunit OS=Arabidopsis thaliana GN=POLA PE=3 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 9.934e-99 Identity = 182/251 (72.51%), Postives = 215/251 (85.66%), Query Frame = 1 Query: 4 VLCCESSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTY-VKETKMAKQRINHGVEDRNVEELTNEDANFDNDTSHNDR 753 VL E+SERALLNRL +EL KLDSD+LVGHNISGFDLDVLL RAQ C+V SSMWSKIGRLKRS MPKL KG + +GSGA+PG+MSCIAGRLLCDT LCSRDLL+EVSYSLT L+KTQLN+DRKE+ P+D+ KMFQ+ ++L+ELIE GETDAWLSMELMFHLSVLPLT QLTNISGNLWGKTLQGARAQR+EY LLH FH+KK+I+PDK + +KE K +K+R+++ EDRNV+EL + D +ND S + Sbjct: 642 VLSIENSERALLNRLFLELNKLDSDILVGHNISGFDLDVLLQRAQACKVQSSMWSKIGRLKRSFMPKL-KGNSNYGSGATPGLMSCIAGRLLCDTDLCSRDLLKEVSYSLTDLSKTQLNRDRKEIAPNDIPKMFQSSKTLVELIECGETDAWLSMELMFHLSVLPLTLQLTNISGNLWGKTLQGARAQRIEYYLLHTFHSKKFILPDKISQRMKEIKSSKRRMDYAPEDRNVDEL-DADLTLENDPSKGSK 890
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_OXYNO (DNA polymerase alpha catalytic subunit OS=Oxytricha nova PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.132e-44 Identity = 93/204 (45.59%), Postives = 138/204 (67.65%), Query Frame = 1 Query: 25 ERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRK---GRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDK 627 ER L+ + ++Y+LD D++V HN+ G D+LL R Q+ ++ S WS+IGRLK++++P + G GS P ++C GRLL DTFL +++L+RE +Y LT LAK QL KDR + + + + L +LI++ E DA+L+++LM HL V+PLT+QLTNI+GNLW ++LQ ARA+R E LLLH F KK+++PDK Sbjct: 607 ERQLIEAFVAKIYQLDPDLMVAHNLCGGMFDLLLARIQMLKI--SHWSRIGRLKKNQIPNKKSDQSGANYGGSQWIPRQVTC--GRLLVDTFLTAKELIRETNYDLTHLAKVQLQKDRIDFDDDLLPTFYVQMAKLFQLIDHTEKDAYLTLQLMNHLQVIPLTKQLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFVLPDK 806
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_OXYTR (DNA polymerase alpha catalytic subunit OS=Oxytricha trifallax PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.722e-42 Identity = 93/205 (45.37%), Postives = 140/205 (68.29%), Query Frame = 1 Query: 22 SERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRK---GRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDK 627 +ER ++ + +++ +D D++V HN+ G D+LL R Q +V + WS+IGRLK++++P + G + GS P ++C GRLL DTFL +++L+RE SY LT LAK QL KDR++ + ++ T E L LI++ E DA+L+++LM HL+++PLT QLTNI+GNLW ++LQ ARA+R E LLLH F KK+I+PDK Sbjct: 632 NERQMIEAFIAKVFIVDPDLVVAHNLCGGMFDLLLARIQYLKV--NHWSRIGRLKKTQIPNKKLDFGGSSYGGSQWIPRQVTC--GRLLVDTFLSAKELVRETSYDLTYLAKVQLKKDRQDFDDELLPTLYITSERLFSLIDHTEKDAYLTIQLMNHLAIIPLTLQLTNIAGNLWFRSLQNARAERNEMLLLHEFKKKKFILPDK 832
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_HUMAN (DNA polymerase alpha catalytic subunit OS=Homo sapiens GN=POLA1 PE=1 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.837e-42 Identity = 95/232 (40.95%), Postives = 146/232 (62.93%), Query Frame = 1 Query: 19 SSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVKETKMAKQRINHGVEDRNVEELTNE 714 ++ER LL + +++K+D D++VGHNI GF+L+VLL R VC+ P WSKIGRLKRS MPKL GR+ FG + GR++CD + +++L+R SY L++L + L +R + ++ M+ L+ L+E+ DA +++M L+VLPL Q+TNI+GN+ +TL G R++R E+LLLHAF+ YIVPDK + K +Q++ G ED ++ TN+ Sbjct: 613 ATERTLLGFFLAKVHKIDPDIIVGHNIYGFELEVLLQRINVCKAPH--WSKIGRLKRSNMPKLG-GRSGFGE------RNATCGRMICDVEISAKELIRCKSYHLSELVQQILKTERVVIPMENIQNMYSESSQLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRK----PQQKL--GDEDEEIDGDTNK 829
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_RAT (DNA polymerase alpha catalytic subunit (Fragment) OS=Rattus norvegicus GN=Pola1 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.236e-41 Identity = 93/232 (40.09%), Postives = 140/232 (60.34%), Query Frame = 1 Query: 19 SSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVKETKMAKQRINHGVEDRNVEELTNE 714 ++ER LL + +++KLD D+LVGHNI GF+L+VLL R C+VP WSKIGRL+RS MPKL GS + G + GR++CD + ++L+ SY L++L + L +R + ++ M+ L+ L+E+ DA +++M L+VLPL Q+TNI+GN+ +TL G R++R E+LLLHAF+ YIVPDK + K + G ED ++ TN+ Sbjct: 620 ATERTLLGFFLAKVHKLDPDILVGHNICGFELEVLLQRINECKVP--FWSKIGRLRRSNMPKL-------GSRSGFGERNATCGRMICDVEISVKELIHCKSYHLSELVQQILKTERIVIPTENIRNMYSEPSHLLYLLEHIWKDARFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIF------RKPQQKPGDEDEEIDGDTNK 836
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_MOUSE (DNA polymerase alpha catalytic subunit OS=Mus musculus GN=Pola1 PE=1 SV=2) HSP 1 Score: 164.851 bits (416), Expect = 4.690e-40 Identity = 91/232 (39.22%), Postives = 143/232 (61.64%), Query Frame = 1 Query: 19 SSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVKETKMAKQRINHGVEDRNVEELTNE 714 ++ER L+ + +++K+D D+LVGHNI F+L+VLL R C+VP WSKIGRL+RS MPKL GS + G + GR++CD + +++L+ SY L++L + L +R + ++ M+ L+ L+E+ DA +++M L+VLPL Q+TNI+GN+ +TL G R++R E+LLLHAF+ YIVPDK + K +Q++ G ED ++ TN+ Sbjct: 617 ATERTLIGFFLAKVHKIDPDILVGHNICSFELEVLLQRINECKVP--YWSKIGRLRRSNMPKL-------GSRSGFGERNATCGRMICDVEISAKELIHCKSYHLSELVQQILKTERIVIPTENIRNMYSESSYLLYLLEHIWKDARFILQIMCELNVLPLALQITNIAGNIMSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRK----PQQKL--GDEDEEIDGDTNK 833
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_XENLA (DNA polymerase alpha catalytic subunit OS=Xenopus laevis GN=pola1 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.509e-38 Identity = 87/207 (42.03%), Postives = 129/207 (62.32%), Query Frame = 1 Query: 22 SERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVK 642 +ER LL + +++K+D DV+VGH+I GFDL+VLL R C+VP WSKIGRL+RS MPKL GR+ F + GR++CD + +++L+R SY L++L L +R + P ++ + L+ ++E DA +++M L+VLPL Q+TNI+GN+ +TL G R++R EYLLLHAF +IVPDK + K Sbjct: 614 TERTLLGFFLAKIHKIDPDVIVGHDIYGFDLEVLLQRINSCKVP--FWSKIGRLRRSVMPKLG-GRSGFAE------RNAACGRIICDIEISAKELIRCKSYHLSELVHQILKAERVVIPPENIRNAYNDSVHLLYMLENTWIDAKFILQIMCELNVLPLALQITNIAGNVMSRTLMGGRSERNEYLLLHAFTENNFIVPDKPVFKK 811
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_DICDI (DNA polymerase alpha catalytic subunit OS=Dictyostelium discoideum GN=pola1 PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.339e-37 Identity = 90/225 (40.00%), Postives = 130/225 (57.78%), Query Frame = 1 Query: 19 SSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFL-CSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVKETKM-----AKQRINH 675 +SER LL+ + D DV GHNI G+D++V+L R + +V W+ IGRLKRS + I+GRL+CD++L C L +E +YSL +L+K QL+ ++ E+ + F+T + L IE E D ++ L+F L V PLT+QLTN++GN W K+L+ RA+R+EYLLLH FH KKY++PDK Y K + AK + NH Sbjct: 681 TSERNLLSFFCETVLNADPDVFAGHNIIGYDIEVILDRLEKLKVME--WAFIGRLKRSSFDRFNH----------------ISGRLICDSYLVCKEFLPKEKNYSLVELSKNQLSINKPEINYLSIEPYFETTKKLNIFIEINENDCYIIFLLIFKLLVFPLTKQLTNLAGNQWDKSLKSNRAERIEYLLLHNFHEKKYLLPDKI-YQKSSSSGGGGGAKDKDNH 886
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_LEIDO (DNA polymerase alpha catalytic subunit OS=Leishmania donovani PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.852e-29 Identity = 83/235 (35.32%), Postives = 125/235 (53.19%), Query Frame = 1 Query: 19 SSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQ----LNKDRKEVGPHDVL---KMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVKETKMAKQRINHGVEDRNVEE 702 ++ERALL+ L +L K+D+D+++GHN GF LD+LL R Q + S WS IGRL +P+ + T +CI GRL+ D++ SR+ + V+Y L LA + K P + M + +++ A LS ++ HL V+ LT++LT I+GNLW +TL GAR++R+EYLLLH FH K+I PD++ Q G +D E+ Sbjct: 507 ANERALLDWLAQQLGKIDADMMIGHNFLGFTLDILLRRYQELSISS--WSTIGRLDLKRLPRFQGTATNVNQEKE----TCI-GRLVVDSYSLSREHYKTVNYRLLSLADQMQLQGITKGSNNFEPGTSVLTPAMLSASRDIYDVLLQVCNCAVLSTAVVSHLDVIRLTKRLTTIAGNLWSRTLFGARSERIEYLLLHTFHDLKFITPDRYV---------QNFKRGRDDEEEED 725 The following BLAST results are available for this feature:
BLAST of CK932690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932690 ID=CK932690; Name=CK932690; organism=Citrus sinensis; type=EST; length=784bpback to top |