CK932697
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_DANRE (Small nuclear ribonucleoprotein E OS=Danio rerio GN=snrpe PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.399e-29 Identity = 59/81 (72.84%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 157 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLMMN 399 KVQ++M QPINLIFR+LQ+++RI +WL+EQ ++RIEG IIGFDEYMNLVLDDAEEVH+K RKPLGRI+LKGDNITL+ + Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRISVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEVHMKTKNRKPLGRIMLKGDNITLLQS 89
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_PIG (Small nuclear ribonucleoprotein E OS=Sus scrofa GN=SNRPE PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.944e-29 Identity = 58/81 (71.60%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 157 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLMMN 399 KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LGRI+LKGDNITL+ + Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQS 89
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_MOUSE (Small nuclear ribonucleoprotein E OS=Mus musculus GN=Snrpe PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.944e-29 Identity = 58/81 (71.60%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 157 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLMMN 399 KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LGRI+LKGDNITL+ + Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQS 89
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_HUMAN (Small nuclear ribonucleoprotein E OS=Homo sapiens GN=SNRPE PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.944e-29 Identity = 58/81 (71.60%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 157 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLMMN 399 KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LGRI+LKGDNITL+ + Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQS 89
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_CHICK (Small nuclear ribonucleoprotein E OS=Gallus gallus GN=SNRPE PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.944e-29 Identity = 58/81 (71.60%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 157 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLMMN 399 KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LGRI+LKGDNITL+ + Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQS 89
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_BOVIN (Small nuclear ribonucleoprotein E OS=Bos taurus GN=SNRPE PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 6.944e-29 Identity = 58/81 (71.60%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 157 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLMMN 399 KVQ++M QPINLIFR+LQ+++RIQ+WL+EQ ++RIEG IIGFDEYMNLVLDDAEE+H K +RK LGRI+LKGDNITL+ + Sbjct: 9 KVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQS 89
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_DROME (Probable small nuclear ribonucleoprotein E OS=Drosophila melanogaster GN=CG18591 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 3.446e-28 Identity = 56/81 (69.14%), Postives = 71/81 (87.65%), Query Frame = 1 Query: 157 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLMMN 399 KVQ++M QPINLIFR+LQ+++R+Q+WL+E LRIEG I+GFDEYMNLVLDDAEEV++K R+ LGRI+LKGDNITL+ N Sbjct: 8 KVQKVMVQPINLIFRYLQNRSRVQVWLYENISLRIEGHIVGFDEYMNLVLDDAEEVYVKTRQRRNLGRIMLKGDNITLIQN 88
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUEL1_HUMAN (Putative small nuclear ribonucleoprotein polypeptide E-like protein 1 OS=Homo sapiens GN=SNRPEL1 PE=5 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 5.879e-28 Identity = 56/81 (69.14%), Postives = 73/81 (90.12%), Query Frame = 1 Query: 157 KVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLMMN 399 KVQ++M QPINLIFR+LQ++++IQ+WL+EQ +++IEG IIGFDEYMNLVLDDAEE+H K +RK LGRI+LKGDNITL+ + Sbjct: 9 KVQKVMVQPINLIFRYLQNRSQIQVWLYEQVNMQIEGCIIGFDEYMNLVLDDAEEIHSKTKSRKQLGRIMLKGDNITLLQS 89
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_CAEBR (Probable small nuclear ribonucleoprotein E OS=Caenorhabditis briggsae GN=snr-6 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.312e-24 Identity = 50/83 (60.24%), Postives = 68/83 (81.93%), Query Frame = 1 Query: 145 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLM 393 M+ K+Q++M QP+NLIFR+LQ++ R+QIWL+E R+EG IIGFDE+MN+V D+AEEV++K R +GRILLKGDNITL+ Sbjct: 1 MSQRKIQKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEVNMKTKGRNKIGRILLKGDNITLI 83
BLAST of CK932697 vs. ExPASy Swiss-Prot
Match: RUXE_CAEEL (Probable small nuclear ribonucleoprotein E OS=Caenorhabditis elegans GN=snr-6 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.147e-23 Identity = 49/83 (59.04%), Postives = 68/83 (81.93%), Query Frame = 1 Query: 145 MASTKVQRIMTQPINLIFRFLQSKARIQIWLFEQKDLRIEGRIIGFDEYMNLVLDDAEEVHIKKNTRKPLGRILLKGDNITLM 393 M++ K+ ++M QP+NLIFR+LQ++ R+QIWL+E R+EG IIGFDE+MN+V D+AEEV++K R +GRILLKGDNITL+ Sbjct: 1 MSTRKLNKVMVQPVNLIFRYLQNRTRVQIWLYEDVTHRLEGYIIGFDEFMNVVFDEAEEVNMKTKGRNKIGRILLKGDNITLI 83 The following BLAST results are available for this feature:
BLAST of CK932697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932697 ID=CK932697; Name=CK932697; organism=Citrus sinensis; type=EST; length=610bpback to top |