CK932921

Overview
NameCK932921
Unique NameCK932921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932921 vs. ExPASy Swiss-Prot
Match: IAR1_ARATH (IAA-alanine resistance protein 1 OS=Arabidopsis thaliana GN=IAR1 PE=2 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 5.310e-40
Identity = 93/161 (57.76%), Postives = 105/161 (65.22%), Query Frame = 3
Query:  366 KMLLPEELAEEEDMKLYGFGPYYXXXXXXXXXXXXXXXXXXXQLSGLALWVNALGCSLLVSLASLICLVLLPVIFIQGKPSKAVVDSLAVFGAGAMLGDAFLHQLPHAFXXXXXXXXXXXXNKAHQVHVGREQXXXXXXXXLQDLSVGISVLAGIVLFLIV 848
            +M LPEELAEEEDM+L GFGP                      L+G ALW+NALGCSLLVSLASLICLVLLP++F+QGKPSK  VDSLA+FGAGAMLGDAFLHQLPHAF            N  H  H             +QDLSVG+SVLAGIV+FL+V
Sbjct:   69 EMKLPEELAEEEDMRLCGFGP----------CLHDHDHESSSTLTGFALWLNALGCSLLVSLASLICLVLLPIMFVQGKPSKWFVDSLALFGAGAMLGDAFLHQLPHAFGGGHSHSNDHHENHDHHDH--SHSDSPSHSHSIQDLSVGLSVLAGIVVFLLV 217          
The following BLAST results are available for this feature:
BLAST of CK932921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IAR1_ARATH5.310e-4057.76IAA-alanine resistance protein 1 OS=Arabidopsis th... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004350_A07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932921 ID=CK932921; Name=CK932921; organism=Citrus sinensis; type=EST; length=849bp
GGGGGGCATCATAGTCGGAATAATCGTGCTCTTCTTTGTCGCTGTTTGTT
ACATAACCATTGAGGGCACCTGTAAACGCCGTCACTCTTAGCTCCCAGCC
AAACACGCCCTAACAATTTTCCCATTTTATCCATTTGAATTCATTTTTTG
TTTGCCTCAATTCACGGACAAACACTTAACAAATGTTGGCTTGTAAGAAA
AAACTGATCCTGCTAGTACTTGCACTTGTTCTGGTCTCGAATTTGGATCT
GGGTTCAGGGGGTGGATTCTGTGCGACGCCGGTGAACGGAAAGGACCATG
GGCATGACCATCAATGCGACCATGGACACCACCATCATGATCATGATCAT
CAACATAAGGAGAAGAAAATGTTGCTTCCCGAGGAGTTAGCTGAGGAGGA
AGACATGAAATTGTACGGATTTGGCCCTTATTACGGCCGTGATCATGATC
ATGATCATGGTCATAGTCGTCATCATCATGATAGAGATTCGCAGCTTTCG
GGTTTAGCTCTCTGGGTGAATGCATTGGGTTGTTCCCTATTGGTGAGCTT
GGCTTCGCTTATTTGCTTGGTACTTTTGCCCGTGATATTCATTCAAGGGA
AGCCATCCAAAGCCGTTGTCGACTCATTGGCTGTATTTGGGGCTGGGGCT
ATGTTGGGTGATGCTTTTCTTCATCAATTGCCACATGCTTTTGGTGGTGA
GCATTCCCACTCACATGATCACCATGAGAACAAGGCTCATCAGGTTCATG
TTGGACGTGAGCAGCATTCGCATTCGCATTCACATTCTTTACAAGATCTT
TCTGTGGGAATATCTGTACTGGCTGGAATTGTACTCTTTCTTATTGTAG
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