CK932937

Overview
NameCK932937
Unique NameCK932937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length452
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5664 contig Csv1_Contig5664:61..512. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.515e-45
Identity = 90/127 (70.87%), Postives = 103/127 (81.10%), Query Frame = 1
Query:   82 MAKMSLIFSLFVGLLMVV----LVSSAKFDDLYQTSWAFDHVQYDGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            M  M L   + + +++VV     VS AKFD+LY++SWA DH   +G+  KL LDNYSGAGF S+SKYLFGKVSIQIKLV GDSAGTVTAFYMSSDGPNHNEF FEFLGNTTGEPY+VQTN+YVNGVG
Sbjct:    1 MVGMDLFKCVMMIMVLVVSCGEAVSGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGVG 127          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.091e-27
Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 1
Query:  151 KFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            +F   Y  +WAFDH++Y   G  ++L+LD Y+G GF SK  YLFG  S+ IK+V GDSAGTVTAFY+SS    H+E  FEFLGN TG+PY++QTNV+  G G
Sbjct:   32 QFGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKG 133          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.091e-27
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 1
Query:  166 YQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            Y  +WAFDH++Y   G  ++L+LD Y+G GF SK  YLFG  S+ IKLV GDSAGTVTAFY+SS    H+E  FEFLGN TG+PY++QTNV+  G G
Sbjct:   35 YVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSSTNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKG 131          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 3.173e-27
Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 1
Query:  166 YQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            Y  +WAFDH++Y   G  + L LD Y+G GF SK  YLFG  S+ IK+V GDSAGTVTAFY+SS    H+E  FEFLGN TG+PY++QTNV+  G G
Sbjct:   36 YFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAG 132          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 4.144e-27
Identity = 64/122 (52.46%), Postives = 86/122 (70.49%), Query Frame = 1
Query:   94 SLIFSLFVGLLMVVLVSSAKFDDLYQTSWAFDHV-QYDGD-TLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN-HNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            +L   LF  L   V+   AKF+D ++ +W+  H+ Q DG   ++L LD  SG GFASK +YLFG+VS++IKL+ GDSAGTVTAFYM+SD  +  +E  FEFLGN +G+PY VQTNV+ +G G
Sbjct:   14 TLSLCLFAALYQPVMSRPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKG 135          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.412e-27
Identity = 57/97 (58.76%), Postives = 71/97 (73.20%), Query Frame = 1
Query:  166 YQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            Y+ SWA  H++Y   G T+ L LD  SGAGF SK  YLFG  S+++KLVGGDSAG VTAFY+SS+   H+E  FEFLGN TG+PY++QTNV+  G G
Sbjct:   36 YEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKG 132          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.206e-26
Identity = 62/127 (48.82%), Postives = 81/127 (63.78%), Query Frame = 1
Query:  109 LFVGLLMVVLVSSA-----------KFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            L + L++V L SSA            F   Y  +WAFDH++Y   G  ++L+LD Y+G GF +K  YLFG  S+ IK+V GDSAGTVTAF +SS    H+E  FEFLGN TG+PY++QTNV+  G G
Sbjct:    6 LILCLVLVSLASSALCAAPRRPVDVPFGRNYIPTWAFDHIKYFNGGSEIQLHLDKYTGTGFQTKGSYLFGHFSMNIKMVPGDSAGTVTAFCLSSQNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKG 132          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.686e-26
Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 1
Query:  154 FDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            FD  Y  +WA DH+ Y   G  ++L+LD  +G GF ++  YLFG  S+ IKLVGGDSAGTVTAFY+SS    H+E  FEFLGN TG+PY++QTNV+  G G
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFSGGKG 132          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.021e-25
Identity = 55/97 (56.70%), Postives = 70/97 (72.16%), Query Frame = 1
Query:  166 YQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPNHNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            Y+ SWA  H+++   G T  L LD  SGAGF SK  YLFG  S++++LVGGDSAG VTAFY+SS+   H+E  FEFLGN TG+PY++QTNV+  G G
Sbjct:   37 YEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKG 133          
BLAST of CK932937 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 1.741e-25
Identity = 59/120 (49.17%), Postives = 83/120 (69.17%), Query Frame = 1
Query:  100 IFSLFVGLLMVVLVSSAKFDDLYQTSWAFDHVQY--DGDTLKLNLDNYSGAGFASKSKYLFGKVSIQIKLVGGDSAGTVTAFYMSSDGPN-HNEFYFEFLGNTTGEPYLVQTNVYVNGVG 450
            IF+L   + + V    A F + ++ +W+  H++   DG  ++L LD  +G GFASK KYLFG+VS++IKL+ GDSAGTVTAFYM+SD     +E  FEFLGN +G+PY VQTN++ +G G
Sbjct:   17 IFTLLTLMFIRVSARPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKG 136          
The following BLAST results are available for this feature:
BLAST of CK932937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
XTH9_ARATH1.515e-4570.87Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_SOYBN1.091e-2755.88Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.091e-2758.76Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH3.173e-2757.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH4.144e-2752.46Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC5.412e-2758.76Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN1.206e-2648.82Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT2.686e-2655.45Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC1.021e-2556.70Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH6_ARATH1.741e-2549.17Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932937 ID=CK932937; Name=CK932937; organism=Citrus sinensis; type=EST; length=452bp
CTTCAACTTCCCTCCACTTCACTGGGCTTGCTCTGCTCATTCGCTTACTT
CCTCTCCCCGTTCTTCTGTCTTCATTCTTCAATGGCTAAAATGTCTTTGA
TTTTCAGTCTGTTTGTGGGTCTTTTAATGGTGGTTTTGGTCAGCTCAGCT
AAGTTTGATGATCTTTATCAAACAAGCTGGGCTTTTGATCATGTTCAGTA
TGATGGGGACACTCTCAAGCTTAACCTCGATAATTATTCCGGAGCTGGGT
TTGCGTCAAAGAGCAAGTATTTGTTTGGGAAAGTCTCCATCCAAATTAAA
CTTGTAGGGGGTGACTCTGCTGGAACTGTCACTGCCTTCTATATGTCATC
AGACGGTCCAAATCACAACGAGTTCTATTTTGAGTTCCTGGGGAACACTA
CAGGAGAGCCATACTTAGTCCAAACCAATGTTTATGTGAATGGTGTGGGC
AA
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