CK932946
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932946 vs. ExPASy Swiss-Prot
Match: C3H14_ORYSJ (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica GN=Os02g0194200 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 9.823e-46 Identity = 98/191 (51.31%), Postives = 117/191 (61.26%), Query Frame = 3 Query: 216 GGRKRGRHDGASNGNGGFKKSKQEMENFPTGIGSESKPCTKFFSTSGCPFGEGCHFLHYVPGGFKAVSQMLNLGGTXXXXXXXXXXXXXXXXXXDGSSPPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTVPSYEDPXXXXXXXXXXXXXXLEPPPQSLXXXXXXXXXXXXKISIDAKLAGAIRGK 788 GGRKRG+ DGA NG GG K +E E+F TG+GS+SKPCTKFFSTSGCPFGEGCHFLH+ PGG++AV++M NLGG DG P VK+RLCNKYN+AEGCK+GDKCHFAHGE ELG+P + P P P ++ KIS+DA LAG I G+ Sbjct: 4 GGRKRGKPDGA-NGAGG--KRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPGGYQAVAKMTNLGG--PAIAPPPGRMPMGNAVPDGPPTPTVKTRLCNKYNTAEGCKWGDKCHFAHGERELGKPMLMDSSMPPPMGPRPTGHFAPPPMPSP-AMSTPASFGASATAKISVDASLAGGIIGR 188
BLAST of CK932946 vs. ExPASy Swiss-Prot
Match: C3H31_ORYSJ (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica GN=Os04g0665700 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 4.271e-41 Identity = 92/194 (47.42%), Postives = 110/194 (56.70%), Query Frame = 3 Query: 213 GGGRKRGRHDGASNGNGGFKKSKQEMENFPTGIGSESKPCTKFFSTSGCPFGEGCHFLHYVPGGFKAVSQMLNLGGTXXXXXXXXXXXXXXXXXXDGSSPPAV--KSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTVPSYEDPXXXXXXXXXXXXXXLEPPPQSLXXXXXXXXXXXXKISIDAKLAGAIRGK 788 G RKR R D A+ G G K+S+ E E+F TG+ S+ KPCTKFFST GCPFGEGCHF H+VPGG++AV++ LNLG G+S PA K+R+C KYN+AEGCKFGDKCHFAHGE ELG+P S+E PP KIS+DA LAG I GK Sbjct: 5 GAARKRSRPDTANGGAAGGKRSR-ETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPGGYQAVAKTLNLGN----PAVPAPARAPMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKCHFAHGERELGKPAYMSHESAMAPPMGGRYGGRPEPPPPAAMGPPAGNFGASATAKISVDASLAGGIIGK 193
BLAST of CK932946 vs. ExPASy Swiss-Prot
Match: C3H44_ORYSJ (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica GN=Os06g0618100 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.502e-35 Identity = 83/198 (41.92%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 204 MELGGGRKRGRHDGASNGNGGFKKSKQEMENFPTGIGSESKPCTKFFSTSGCPFGEGCHFLHYVPGGFKAVSQMLNLGGTXXXXXXXXXXXXXXXXXXDGSSPPAVKSRLCNKYNSAEGCKFGDKCHFAHGEWELGRPTVPSYEDPXXXXXXXXXXXXXXLEPPPQ---SLXXXXXXXXXXXXKISIDAKLAGAIRGK 788 ME GGG++ A G G K + E+ G+GS+ KPCTKFFSTSGCPFG CHFLH PGG++A ++M + GGT +G +VK+R+CNKYN+AEGCK+G KCHFAHGE ELG+P + P E PP + KIS+DA LAG I GK Sbjct: 1 MEAGGGKR-----AAPEGTNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGYQAAAKMTSHGGT--AVAAPPGRMPLGPGAPNGPPTSSVKTRMCNKYNTAEGCKWGSKCHFAHGERELGKPMLLDNSMP-------HPMGSMPFEAPPMPGPDIVPPSTFGASATAKISVDASLAGGIIGK 184
BLAST of CK932946 vs. ExPASy Swiss-Prot
Match: C3H36_ARATH (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana GN=At3g12130 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.820e-27 Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 3 Query: 222 RKRGRHD-GASNGNGG-FKKSKQEMENFPTGIGSESKPCTKFFSTSGCPFGEGCHFLHYVPGGFKAVSQMLNLG 437 RKRGR + G+ N NGG +KKSKQEME++ TG+GS+SKPCTKFFSTSGCPFGE CHFLHYVPGG+ AVSQM N+G Sbjct: 4 RKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFLHYVPGGYNAVSQMTNMG 77
BLAST of CK932946 vs. ExPASy Swiss-Prot
Match: C3H52_ARATH (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana GN=At5g06770 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.881e-26 Identity = 53/73 (72.60%), Postives = 62/73 (84.93%), Query Frame = 3 Query: 222 RKRGRHDGAS--NGNGGFKKSKQEMENFPTGIGSESKPCTKFFSTSGCPFGEGCHFLHYVPGGFKAVSQMLNL 434 RKRGR + A+ N NGGFK+SKQEME+ TG+GS+SKPCTKFFSTSGCPFG+ CHFLHYVPGG+ A +QM NL Sbjct: 4 RKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFLHYVPGGYNAAAQMTNL 76 The following BLAST results are available for this feature:
BLAST of CK932946 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932946 ID=CK932946; Name=CK932946; organism=Citrus sinensis; type=EST; length=790bpback to top |