CK932955

Overview
NameCK932955
Unique NameCK932955
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1505 contig Csv1_Contig1505:1..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_MAGSM (Bifunctional protein folD OS=Magnetococcus sp. (strain MC-1) GN=folD PE=3 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 7.086e-68
Identity = 136/237 (57.38%), Postives = 165/237 (69.62%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A +IDGKA+AQ++R E+  EV  L   +   PGLAVV+VG    SQ YV  K++AC   GI SF  +L    S+AEL++ + +LN    VHGILVQLPLPKHI+E+KVL  IS  KD DGFHP N+G+L     DP F PCTP G +E+LK SGV  KGK AVV+GRSNIVG PV+L+LL A ATVTI HS TPD    V+ ADIV+AA G+A M+ GSWIK GA VIDVG N  +D
Sbjct:    2 AHVIDGKAIAQSVREELRMEVERLKLNHQLTPGLAVVLVGADPASQVYVRNKKRACETAGIASFSHELAATTSQAELLALIEQLNQDDAVHGILVQLPLPKHIDEQKVLEAISPSKDADGFHPYNVGRLVT--GDPTFQPCTPWGVMEMLKVSGVDPKGKHAVVIGRSNIVGKPVALMLLAAHATVTICHSRTPDLAETVKRADIVVAAVGRANMVPGSWIKKGAVVIDVGINRGED 236          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_GEOUR (Bifunctional protein folD OS=Geobacter uraniireducens (strain Rf4) GN=folD PE=3 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 3.888e-66
Identity = 136/237 (57.38%), Postives = 166/237 (70.04%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A IIDGKA+A  IR EI  EV  L+ K G  PGLAVV+VG    S+ YVSMK KAC +VGI S +  LP   SEA+L+  +H+LN+ P +HGIL+QLPLPK I+ EKVL  IS EKD DGFHP N+G+L +    PLF PCTP G + +LK +GV + GK  VVVGRSNIVG PV+ + L+ +ATVT+ HS T D  + V  AD+VIAA GQ  MIKG+WIK GA VIDVG N V +
Sbjct:    2 AKIIDGKAIAAKIRGEITAEVAKLASK-GVTPGLAVVLVGEDPASKVYVSMKEKACKDVGIFSDEYKLPVDTSEADLLLLIHKLNSDPKIHGILIQLPLPKQIDTEKVLEAISPEKDADGFHPYNVGRLVI--GKPLFQPCTPYGVMVMLKEAGVELAGKEVVVVGRSNIVGKPVAFMCLQQNATVTLCHSKTRDLAAKVGMADVVIAAVGQPEMIKGAWIKEGAVVIDVGVNRVGE 235          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD2_GEOMG (Bifunctional protein folD 2 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=folD2 PE=3 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.299e-65
Identity = 135/237 (56.96%), Postives = 167/237 (70.46%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            +TIIDGKA+A  +R+EIA EV++L EK G +PGLA V+VG    S+ YV MK  AC E+G+ S    LP   +EAEL++ V  LN+ P +HGILVQLPLPK IN + +L  IS  KDVDGFHP N+G+L M G+ P F PCTP G + +L+ +GV + GK  VVVGRSNIVG PV+L+ L+  ATVTI HS T D  S V+EAD+VIAA G   MIKG WIK GA VIDVG N V +
Sbjct:    2 STIIDGKAIAAKLRAEIATEVKILKEK-GIIPGLATVLVGEDPASEVYVRMKGNACQELGMHSVKHTLPATTTEAELLALVARLNSDPTIHGILVQLPLPKQINSDTILEAISPVKDVDGFHPYNVGRL-MVGK-PTFQPCTPYGVMVMLREAGVDLAGKEVVVVGRSNIVGKPVALMCLQQHATVTICHSKTRDLPSKVKEADVVIAAVGVPEMIKGEWIKEGAVVIDVGVNRVGE 235          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_PELPD (Bifunctional protein folD OS=Pelobacter propionicus (strain DSM 2379) GN=folD PE=3 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.134e-64
Identity = 135/237 (56.96%), Postives = 165/237 (69.62%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A IIDGKA+A  IRSEIA  VR L  K G  PGLAVV+VG  + S+ YVSMK KAC + GI S +  L  + SEAEL++ V  LN  P +HGILVQLPLP  I+ +KVL  IS  KDVDGFHP N+G+L++    P+F PCTP G + +L+ +GV +KGK  VVVGRSNIVG PV+++ L   ATVT+ HS T D   +VR AD+VIAA G+  MIKG WIK GA VIDVG N V +
Sbjct:    2 AHIIDGKAIAAKIRSEIASGVRELQGK-GVTPGLAVVLVGDDQASRVYVSMKEKACNDAGIFSVEHKLAAETSEAELLALVELLNNDPKIHGILVQLPLPSQIDTDKVLEAISPFKDVDGFHPYNVGRLSVG--KPVFQPCTPYGVMVMLREAGVELKGKEVVVVGRSNIVGKPVAMMCLAEHATVTLCHSRTRDLPDVVRRADVVIAAVGRPEMIKGDWIKEGAVVIDVGINRVGE 235          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_GEOTN (Bifunctional protein folD OS=Geobacillus thermodenitrificans (strain NG80-2) GN=folD PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.787e-64
Identity = 131/236 (55.51%), Postives = 163/236 (69.07%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVD 765
            A II G  +A+TIR+E+A+EV  L    G  PGLAV++VG    S SYV  K+KACAEVGI+S     P  +SE EL++K+ ELNA P VHGILVQLPLP HI E  V+  I+ EKDVDGFHP+N+GK+ +    P FLPCTP G L ++K +G+ I GK  VVVGRSNIVG PV  L L+  ATVT  HS TPD  +I R+ADI+I A G+A +I    +KPGA VIDVG N ++
Sbjct:    3 AQIISGTELAKTIRAELADEVAKLKAN-GIEPGLAVILVGDDPASHSYVKGKQKACAEVGIRSLLYTFPATISEEELLAKIQELNADPTVHGILVQLPLPAHIREWSVIETIAPEKDVDGFHPINVGKMMI--GQPAFLPCTPHGVLVMVKSAGIDIAGKHVVVVGRSNIVGKPVGQLFLREHATVTYAHSKTPDLAAITRQADILIVAVGKARLIGPEHVKPGAVVIDVGVNRLE 235          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LISMO (Bifunctional protein folD OS=Listeria monocytogenes GN=folD PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.753e-64
Identity = 132/241 (54.77%), Postives = 173/241 (71.78%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  D++ K  G
Sbjct:    4 IIDGKKLAKEIQEKVTREVAELV-KEGKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISFDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDR-DENNKLCG 240          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LISMC (Bifunctional protein folD OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=folD PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.753e-64
Identity = 132/241 (54.77%), Postives = 173/241 (71.78%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  D++ K  G
Sbjct:    4 IIDGKKLAKEIQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAVVIDVGMDR-DENNKLCG 240          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LISMH (Bifunctional protein folD OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=folD PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.208e-64
Identity = 132/241 (54.77%), Postives = 173/241 (71.78%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+S V ELN    +HGILVQLPLP+HI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  D++ K  G
Sbjct:    4 IIDGKKLAKEIQEKVTREVAELV-KEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISYDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDR-DENNKLCG 240          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_LISIN (Bifunctional protein folD OS=Listeria innocua GN=folD PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.208e-64
Identity = 132/241 (54.77%), Postives = 172/241 (71.37%), Query Frame = 1
Query:   64 IIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDDSTKKSG 786
            IIDGK +A+ I+ ++  EV  L  K GK PGLAVV+VG  + S++YV  K+K   E G+KS  I+LPE V+E +L+  V ELN    +HGILVQLPLPKHI+EEKV+  IS +KDVDGFHP+N+G L + G+D  F+PCTP G +EL+K +G  I+GKRAVV+GRSNIVG PV+ LLL  +ATVTI HS T D   + +EADI++ A G A  +K  +IKPGA VIDVG +  D++ K  G
Sbjct:    4 IIDGKKLAKEIQEKVTSEVAELV-KQGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPETVTEEKLLKVVEELNEDNTIHGILVQLPLPKHISEEKVIDAISFDKDVDGFHPVNVGNLFI-GKDS-FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKEYIKPGAIVIDVGMDR-DENNKLCG 240          
BLAST of CK932955 vs. ExPASy Swiss-Prot
Match: FOLD_GEOSF (Bifunctional protein folD OS=Geobacter sp. (strain FRC-32) GN=folD PE=3 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 6.208e-64
Identity = 134/237 (56.54%), Postives = 163/237 (68.78%), Query Frame = 1
Query:   58 ATIIDGKAVAQTIRSEIAEEVRLLSEKYGKVPGLAVVIVGGRKDSQSYVSMKRKACAEVGIKSFDIDLPEQVSEAELISKVHELNAMPDVHGILVQLPLPKHINEEKVLGEISLEKDVDGFHPLNIGKLAMKGRDPLFLPCTPKGCLELLKRSGVTIKGKRAVVVGRSNIVGLPVSLLLLKADATVTIVHSHTPDPESIVREADIVIAAAGQAMMIKGSWIKPGAAVIDVGTNAVDD 768
            A IIDGKA+A  IR EI  EV  L+ + G  PGLAVV+VG    S+ YVSMK KAC +VGI S +  LP + +E EL+  + +LN    +HGILVQLPLPK IN EKVL  IS EKD DGFHP N+G+L +    PLF PCTP G + +LK +GV + GK  VVVGRSNIVG PV+ + L+ +ATVT+ HS T D  + V  AD+VIAA GQ  MIKG+WIK GA VIDVG N V +
Sbjct:    2 AKIIDGKAIAAKIRGEITAEVAKLAAQ-GITPGLAVVLVGEDPASKVYVSMKEKACKDVGIFSDEYKLPAETTEEELLQLIDKLNKDRKIHGILVQLPLPKQINTEKVLEAISPEKDADGFHPYNVGRLVIG--KPLFQPCTPYGVMVMLKETGVDLAGKEVVVVGRSNIVGKPVAFMCLQQNATVTLCHSKTRDLAAKVAMADVVIAAVGQPEMIKGAWIKKGAVVIDVGVNRVGE 235          
The following BLAST results are available for this feature:
BLAST of CK932955 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
FOLD_MAGSM7.086e-6857.38Bifunctional protein folD OS=Magnetococcus sp. (st... [more]
FOLD_GEOUR3.888e-6657.38Bifunctional protein folD OS=Geobacter uraniireduc... [more]
FOLD2_GEOMG4.299e-6556.96Bifunctional protein folD 2 OS=Geobacter metallire... [more]
FOLD_PELPD2.134e-6456.96Bifunctional protein folD OS=Pelobacter propionicu... [more]
FOLD_GEOTN2.787e-6455.51Bifunctional protein folD OS=Geobacillus thermoden... [more]
FOLD_LISMO4.753e-6454.77Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISMC4.753e-6454.77Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISMH6.208e-6454.77Bifunctional protein folD OS=Listeria monocytogene... [more]
FOLD_LISIN6.208e-6454.77Bifunctional protein folD OS=Listeria innocua GN=f... [more]
FOLD_GEOSF6.208e-6456.54Bifunctional protein folD OS=Geobacter sp. (strain... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932955 ID=CK932955; Name=CK932955; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGAGTTATCAAACCTTTAGTTCTAGAATAATGGCGGCACCGTCAGA
TCAGAAGGCCACCATAATCGACGGCAAAGCCGTCGCTCAGACCATCCGAT
CTGAAATCGCAGAAGAAGTCCGCCTCCTTTCTGAAAAATATGGCAAGGTG
CCTGGACTGGCAGTAGTAATAGTGGGTGGCAGAAAAGACTCTCAAAGCTA
TGTGAGCATGAAGAGAAAGGCTTGTGCTGAAGTTGGGATTAAGTCTTTTG
ACATAGACCTCCCCGAGCAAGTCTCCGAGGCCGAGCTTATCAGCAAGGTT
CACGAGCTTAACGCAATGCCTGATGTACATGGTATATTGGTTCAACTTCC
ATTGCCGAAGCATATAAATGAAGAGAAAGTTTTAGGTGAGATAAGCCTTG
AGAAGGATGTTGATGGCTTTCATCCTTTGAACATTGGCAAGCTCGCAATG
AAAGGCAGAGACCCCCTCTTCCTTCCTTGCACGCCCAAGGGATGCCTTGA
ACTTCTGAAACGAAGTGGTGTTACTATAAAGGGTAAAAGGGCTGTTGTGG
TGGGTCGAAGTAACATTGTTGGACTCCCAGTTTCATTGCTGCTGCTGAAA
GCTGATGCCACTGTAACCATAGTCCATTCACATACCCCTGATCCTGAAAG
TATCGTTCGTGAAGCTGACATTGTTATTGCTGCAGCCGGACAAGCAATGA
TGATCAAGGGAAGTTGGATCAAGCCTGGTGCTGCTGTTATTGATGTTGGA
ACAAATGCTGTCGATGACTCGACCAAGAAGTCAGGCTATAGGT
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