CK932957

Overview
NameCK932957
Unique NameCK932957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK932957_ssr682 microsatellite CK932957_ssr682:682..693. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1506 contig Csv1_Contig1506:1..730. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS157_ARATH (15.7 kDa heat shock protein, peroxisomal OS=Arabidopsis thaliana GN=HSP15.7 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.339e-43
Identity = 89/141 (63.12%), Postives = 112/141 (79.43%), Query Frame = 3
Query:  183 FGYPFRRFFMSPPVFREWSGSTALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRA--GGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINITSKL 599
            F YPFRRF       +EWS STAL+DW+ES ++HIFKI+VPGY++E+IKVQIE+GN+L I GEG K++++ N    VWHVAER A  GG  +F R IELPENVK+DQ+KA+V+NGVLTV+VPKD + K S VRN+NITSKL
Sbjct:    7 FLYPFRRF-------QEWSRSTALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIKEEKKEN---LVWHVAEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNITSKL 137          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.426e-32
Identity = 68/145 (46.90%), Postives = 99/145 (68.28%), Query Frame = 3
Query:  180 FFGYPFRRFFMSPPVFREWSGS--TALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIG---EGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINITSKL 599
            FFG PFRR     P   +W+ +  TA MDW+E+P++H+ +I+VPG  ++++KVQ+EDGN+L + G     A +KE    K+ VWHVAER   GR +F+RE+ LP  V+++QI+A VDNGVLTV+VPK+    +   R I ++SKL
Sbjct:    5 FFGGPFRRILYGRPFPPDWASASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAER---GRPEFAREVALPAEVRVEQIRASVDNGVLTVVVPKEPAPARPRTRPIAVSSKL 146          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS17A_ARATH (17.6 kDa class I heat shock protein 1 OS=Arabidopsis thaliana GN=HSP17.6A PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.788e-26
Identity = 59/117 (50.43%), Postives = 84/117 (71.79%), Query Frame = 3
Query:  243 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPK-DANHKKSSVRNINIT 590
            + A +DW E+  AH+FK D+PG  +E +KV+IED ++L+I GE   +KEE   K+  WH  ER +GG   FSR+  LPENVK+DQ+KA ++NGVLTV VPK + N KK+ V++I+I+
Sbjct:   44 ANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEE---KQDTWHRVERSSGG---FSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQVKSIDIS 154          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP11_HELAN (17.6 kDa class I heat shock protein OS=Helianthus annuus GN=HSP17.6 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.200e-25
Identity = 56/133 (42.11%), Postives = 84/133 (63.16%), Query Frame = 3
Query:  192 PFRRFFMSPPVFREWSGSTALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            PF+    + P     +   A +DW E+P AH+ K D+PG  +E +KV++EDG +L+I GE  +++EE   K+  WH  ER +   G F R   LPEN K+D++KA ++NGVLTV+VPK+   KK  V+ I+I+
Sbjct:   26 PFQGIISTEPARETAAIVNARIDWKETPEAHVLKADLPGMKKEEVKVEVEDGRVLQISGERCREQEE---KDDTWHRVERSS---GKFIRRFRLPENAKMDEVKAMMENGVLTVVVPKEEEEKKPMVKAIDIS 152          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HSP11_CHERU (18.3 kDa class I heat shock protein OS=Chenopodium rubrum GN=HSP18 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.873e-25
Identity = 57/115 (49.57%), Postives = 79/115 (68.70%), Query Frame = 3
Query:  243 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINI 587
            + A +DW E+P AH+FK D+PG  +E +KV++EDGN+LRI G+ A++KEE   K   WH  ER +   G F R+  LPEN K+DQ+KA ++NGVLTV VPK+    K  V+ IN+
Sbjct:   53 ANARIDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLRISGQRAREKEE---KNDTWHRVERSS---GQFMRKFRLPENAKVDQVKAGMENGVLTVTVPKN-EAPKPQVKAINV 160          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS181_ORYSJ (18.1 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25
Identity = 58/114 (50.88%), Postives = 78/114 (68.42%), Query Frame = 3
Query:  249 ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            A +DW E+P AH+FK DVPG  +E +KV++EDGN+L+I GE +K++EE   K   WH  ER +   G F R   LPEN K +QIKA ++NGVLTV VPK+   KK  V++I +T
Sbjct:   54 ARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDK---WHRVERSS---GKFLRRFRLPENTKPEQIKASMENGVLTVTVPKE-EPKKPDVKSIQVT 160          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS181_ARATH (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.358e-25
Identity = 56/116 (48.28%), Postives = 81/116 (69.83%), Query Frame = 3
Query:  243 STALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            + A +DW E+P AH+FK D+PG  +E +KV++ED N+L+I GE +K+ EE N K   WH  ER +   G F R   LPEN K++++KA ++NGVLTV+VPK A  KK  V++I+I+
Sbjct:   50 TNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDK---WHRVERAS---GKFMRRFRLPENAKMEEVKATMENGVLTVVVPK-APEKKPQVKSIDIS 158          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS178_ARATH (17.8 kDa class I heat shock protein OS=Arabidopsis thaliana GN=HSP17.8 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  192 PFRRFFMSPPVFREWSGST-ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPK-DANHKKSSVRNINIT 590
            PF+       +  E S  T A +DW E+  AH+FK D+PG  +E +KV+IED ++L+I GE   +KEE   K+  WH  ER +   G FSR+ +LPENVK+DQ+KA ++NGVLTV VPK +   KK+ V++I+I+
Sbjct:   28 PFKELQFPSSLSGETSAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEE---KQDTWHRVERSS---GQFSRKFKLPENVKMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDIS 156          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS174_ORYSJ (17.4 kDa class I heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.4 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.092e-24
Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 3
Query:  249 ALMDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            A +DW E+P AH+FK DVPG  +E +KV++EDGN+L+I GE  K++EE   K   WH  ER +   G F R   LPEN K +QIKA ++NGVLTV VPK+   KK  V++I IT
Sbjct:   47 ARIDWKETPEAHVFKADVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDK---WHRVERSS---GKFLRRFRLPENTKPEQIKASMENGVLTVTVPKE-EPKKPDVKSIQIT 153          
BLAST of CK932957 vs. ExPASy Swiss-Prot
Match: HS16A_WHEAT (16.9 kDa class I heat shock protein 1 OS=Triticum aestivum GN=hsp16.9A PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.862e-24
Identity = 61/143 (42.66%), Postives = 87/143 (60.84%), Query Frame = 3
Query:  177 DFFGYPFRRFFMSPPVFREWSGSTAL-----MDWLESPSAHIFKIDVPGYSRENIKVQIEDGNILRIIGEGAKDKEEANTKETVWHVAERRAGGRGDFSREIELPENVKLDQIKAHVDNGVLTVIVPKDANHKKSSVRNINIT 590
            D +  PF  F    P     S  TA      +DW E+P AH+FK+D+PG  +E +KV++EDGN+L + GE +++KE+ N K   WH  ER +   G F R   LPE+ K++++KA ++NGVLTV VPK A  KK  V+ I I+
Sbjct:   15 DLWADPFDTFRSIVPAISGGSSETAAFANARVDWKETPEAHVFKVDLPGVKKEEVKVEVEDGNVLVVSGERSREKEDKNDK---WHRVERSS---GKFVRRFRLPEDAKVEEVKAGLENGVLTVTVPK-AEVKKPEVKAIEIS 150          
The following BLAST results are available for this feature:
BLAST of CK932957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HS157_ARATH2.339e-4363.1215.7 kDa heat shock protein, peroxisomal OS=Arabid... [more]
HSP16_ORYSJ2.426e-3246.9016.0 kDa heat shock protein, peroxisomal OS=Oryza ... [more]
HS17A_ARATH5.788e-2650.4317.6 kDa class I heat shock protein 1 OS=Arabidops... [more]
HSP11_HELAN2.200e-2542.1117.6 kDa class I heat shock protein OS=Helianthus ... [more]
HSP11_CHERU2.873e-2549.5718.3 kDa class I heat shock protein OS=Chenopodium... [more]
HS181_ORYSJ8.358e-2550.8818.1 kDa class I heat shock protein OS=Oryza sativ... [more]
HS181_ARATH8.358e-2548.2818.1 kDa class I heat shock protein OS=Arabidopsis... [more]
HS178_ARATH1.092e-2445.9317.8 kDa class I heat shock protein OS=Arabidopsis... [more]
HS174_ORYSJ1.092e-2451.7517.4 kDa class I heat shock protein OS=Oryza sativ... [more]
HS16A_WHEAT1.862e-2442.6616.9 kDa class I heat shock protein 1 OS=Triticum ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_E08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932957 ID=CK932957; Name=CK932957; organism=Citrus sinensis; type=EST; length=730bp
GGGGCTTTCTGAGAACTATTATCATACACAGCAGAGGATGAGGCTTGTAG
AATATTCTGGACATTCAACGATTACTCGAACTCCGCTCTTATAAGCCAAC
CAAACAAAACCTCGCACTCCTCCATCCCCTTTACGCCACAATCCAAAATC
AAGATTACAATCAAACAACGGCTGGTGACTTTTTTGGGTACCCTTTCAGG
CGCTTTTTCATGAGCCCTCCTGTCTTCCGTGAATGGTCCGGATCGACAGC
CCTGATGGATTGGCTCGAATCCCCAAGTGCCCACATATTCAAGATCGACG
TCCCAGGATATAGCAGGGAGAACATAAAGGTACAGATTGAAGACGGGAAC
ATATTGCGCATAATAGGAGAGGGTGCTAAAGATAAAGAGGAGGCAAATAC
AAAAGAGACAGTTTGGCATGTAGCAGAAAGGCGTGCTGGCGGAAGAGGAG
ACTTTTCTCGGGAAATTGAATTGCCCGAAAATGTGAAGTTGGATCAAATC
AAGGCCCATGTGGATAATGGGGTTCTTACCGTTATTGTGCCCAAAGATGC
CAATCACAAGAAGAGTAGTGTTAGGAATATCAACATCACTAGCAAGCTCT
AGTTGAGTAGATTCTATGAAATTATTAGGCTCCCTCTTCTCAGCTGTCCA
ATTTCCAAAATGGGCTTCTGATGTAAGAATAAATAATAATAATAACAATC
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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