CK932992

Overview
NameCK932992
Unique NameCK932992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1512 contig Csv1_Contig1512:1..849. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 6.530e-38
Identity = 77/146 (52.74%), Postives = 116/146 (79.45%), Query Frame = 1
Query:  403 LFIIFYFTVLNTAKAADP-DKEPFVGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSSAPILLPAIESLYSALVAANL 837
            L +     VL +A  + P D+  ++GVNIGTD+S++  PT +V+ L+ Q+I HIRLY+ADP LL ALA T I+VI+S+PN+QLL IG SN+TAA+W+ +NVIA+YP T+ITA++VG EVLT++ ++AP+L+ AI+++++AL++ANL
Sbjct:    8 LLLSLSLLVLASASPSPPADEGSYIGVNIGTDLSDMPHPTQVVALLKAQEIRHIRLYNADPGLLIALANTGIKVIISIPNDQLLGIGQSNSTAANWVKRNVIAHYPATMITAVSVGSEVLTSLSNAAPVLVSAIKNVHAALLSANL 153          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E133_ARATH (Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 9.758e-34
Identity = 74/149 (49.66%), Postives = 105/149 (70.47%), Query Frame = 1
Query:  403 LFIIFYFTVLNTAKAADPDKEPFVGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSSAPILLPAIESLYSALVAANLHTQI 849
            L ++F F   ++A + D      +GVNIGT+V+N+ SPT +V+ L+ Q I  +RLYDAD  +L A A T ++VI+SVPN+QLL I  SN TAA+W+ +NV AYYP T IT IAVG EVLT++ ++A +L+ A++ + +ALV ANL  QI
Sbjct:    4 LLLLFLFLFASSALSQDS----LIGVNIGTEVTNMPSPTQVVALLKSQNINRVRLYDADRSMLLAFAHTGVQVIISVPNDQLLGISQSNATAANWVTRNVAAYYPATNITTIAVGSEVLTSLTNAASVLVSALKYIQAALVTANLDRQI 148          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E134_ARATH (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana GN=At3g13560 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.274e-33
Identity = 69/127 (54.33%), Postives = 96/127 (75.59%), Query Frame = 1
Query:  469 FVGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSSAPILLPAIESLYSALVAANLHTQI 849
            F+GVNIGTD++N+  P+D+V+ L+ Q+ITH+RLYDA+  +LKA A T I V+V V N ++L IG   + AA+W+ KNV AY P T ITAIAVG EVLTT+P  APIL  A+ +++ ALVA+NL+ ++
Sbjct:   25 FIGVNIGTDLTNMPPPSDIVTLLKSQQITHVRLYDANSHMLKAFANTSIEVMVGVTNEEILKIGRFPSAAAAWVNKNVAAYIPSTNITAIAVGSEVLTTIPHVAPILASALNNIHKALVASNLNFKV 151          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20
Identity = 54/152 (35.53%), Postives = 84/152 (55.26%), Query Frame = 1
Query:  397 LTLFIIFYFTVLNTAKAADPDKEPFVGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVL-TTVPSSAPILLPAIESLYSALVAANLHTQI 849
            + L I  YF ++  +       EPF+GVN G    NL  P++ V  LQ   I  +RLY ADP ++KALA T + +++   N  + ++ S    A  WI  NV+ +YP + I  I VG+E+L +  P+    LLPA++++  AL A +L  +I
Sbjct:    1 MALSISIYFLLIFLSHFPSSHAEPFIGVNYGQVADNLPPPSETVKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKI 152          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: EA6_ARATH (Probable glucan endo-1,3-beta-glucosidase A6 OS=Arabidopsis thaliana GN=A6 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.047e-19
Identity = 44/124 (35.48%), Postives = 79/124 (63.71%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSSAPI-LLPAIESLYSALVAANLH 840
            +G+N G   +NL SP   ++F++  K  H++LYDADP+ L  L++T + V ++VPN+Q+ A+ S+ T A  W+  N++ YYP+T I  + VG+E+L+    +  + L+PA+  + ++L    +H
Sbjct:   42 IGINYGRRGNNLPSPYQSINFIKSIKAGHVKLYDADPESLTLLSQTNLYVTITVPNHQITALSSNQTIADEWVRTNILPYYPQTQIRFVLVGNEILSYNSGNVSVNLVPAMRKIVNSLRLHGIH 165          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18
Identity = 45/126 (35.71%), Postives = 75/126 (59.52%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSSAPILLPAIESLYSALVAANLHTQI 849
            +G+  G +  NL SP  +   +Q   I  +R+YDA+ D+LKA A T I +++ VPN  LLA     +   +W+  N++ YYP T IT+I+VG EV     ++  ++LPA+ ++++AL  + L  +I
Sbjct:   27 IGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPDNATGLVLPAMRNIHTALKKSGLDKKI 152          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.725e-17
Identity = 51/133 (38.35%), Postives = 77/133 (57.89%), Query Frame = 1
Query:  454 PDKEPFVGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSSAPI-LLPAIESLYSALVAANLHTQI 849
            P     +GVN G    NL SPTD++  ++    T ++LYDA+P +LKA + T I  I+ +  N+ L+     + A +WI +NV  + P T IT I +G+E+L    SS    LLPA++ ++SAL+ A L  QI
Sbjct:   23 PTTTTSIGVNYGQIGDNLPSPTDVIPLIKSIGATKVKLYDANPQILKAFSNTGIEFIIGL-GNEYLSKMKDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQI 154          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 50/127 (39.37%), Postives = 75/127 (59.06%), Query Frame = 1
Query:  472 VGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSS-APILLPAIESLYSALVAANLHTQI 849
            +G+N G   +NL  P +++  L+    T ++LYDADP  L+A A +   + V++  N+ LA  S    A  W+ +NV AY P T I AI VG+EVLT+  S+    L PA++S++ ALV   L+ QI
Sbjct:   27 IGINYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQALRAFAGSGFELTVAL-GNEYLAQMSDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQI 152          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E13B_PEA (Glucan endo-1,3-beta-glucosidase OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.044e-15
Identity = 48/153 (31.37%), Postives = 83/153 (54.25%), Query Frame = 1
Query:  397 LTLFIIFYFTVLNTAKAADPDKEPFVGVNIGTDVSNLLSPTDLVSFLQVQKITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNTTAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSS--APILLPAIESLYSALVAANLHTQI 849
            ++LF++  FT+        P  +  +G+  G   +NL    ++++  +   I  +RLYD +   L AL  + I +I+ +PN+ L  + ++  +A  W+ +NV+ +YP   I  IAVG+EV     SS  A  +LPA +++Y A+ A  LH QI
Sbjct:   14 VSLFLLELFTI-----NLIPTTDAQIGICYGMMGNNLPPANEVIALYKANNIKRMRLYDPNQPALNALRDSGIELILGIPNSDLQTLATNQDSARQWVQRNVLNFYPSVKIKYIAVGNEVSPVGGSSWLAQYVLPATQNVYQAIRAQGLHDQI 161          
BLAST of CK932992 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.670e-15
Identity = 52/152 (34.21%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  397 LTLFIIFYFTVLNTAKAADPDKEPFVGVNIGTDVSNLLSPTDLVSFLQVQK-ITHIRLYDADPDLLKALAKTKIRVIVSVPNNQLLAIGSSNT---TAASWIGKNVIAYYPETLITAIAVGDEVLTTVPSSAPI-LLPAIESLYSALVAANL 837
            + L I+        A A        +GVN G +  NL SPT + +FL  +  I  ++L+DA+P  + A A T I + VS+PN+ L A+    T    A SWI  N+  Y P T +T +  G+E+L +  ++  + LLPA+  L  AL A  L
Sbjct:    1 MPLLILLMLLAAGAAGAESATPSLHIGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGL 152          
The following BLAST results are available for this feature:
BLAST of CK932992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
E132_ARATH6.530e-3852.74Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis ... [more]
E133_ARATH9.758e-3449.66Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis ... [more]
E134_ARATH1.274e-3354.33Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis ... [more]
E137_ARATH1.237e-2035.53Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
EA6_ARATH3.047e-1935.48Probable glucan endo-1,3-beta-glucosidase A6 OS=Ar... [more]
E1312_ARATH2.580e-1835.71Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E1311_ARATH3.725e-1738.35Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1310_ARATH3.154e-1639.37Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E13B_PEA2.044e-1531.37Glucan endo-1,3-beta-glucosidase OS=Pisum sativum ... [more]
E13B_WHEAT2.670e-1534.21Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004349_B05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932992 ID=CK932992; Name=CK932992; organism=Citrus sinensis; type=EST; length=849bp
GCGGGGGAAGTGTTAAACAAACTAATAAAGANNNGGAATTTGCTAGAGCA
TTTTTACCATACTGTCGGCTCAGTCACAAGTCACAAGGTCAATTTGGTGA
TTGCCAGAGATACTGAGCTAGTAAATTGAAAAACACATCTTTTGGGAAGC
AAGAATCGAAGTTAACCCCCAAAATCAAGATATCTTTTGATGAATGTCCT
CTTTCTTCTTCATACTGTACATTTCTCAAGTCAGTAACCAAAAACAAATC
AAAGCCTCTCAAGTAAGACCCACCAAGAACTCCGAAATATTAGAGAAAAT
AATCCCAAAAGATAATGCAAGGTTCTGGAGCTGAACCTCCAGAAGCAGGG
GATAGAGAAGTAAAGCTCCATCTTGGCTTCAATGGAAAACCCTAAGCTGA
CCCTTTTTATCATCTTCTACTTTACGGTACTTAACACAGCTAAAGCAGCT
GACCCAGACAAGGAACCATTTGTTGGTGTGAACATAGGCACCGATGTTTC
AAATTTACTCTCTCCCACGGACTTGGTTTCCTTCTTGCAAGTTCAGAAAA
TCACACACATCAGGCTTTATGATGCAGACCCAGACTTACTCAAAGCACTG
GCTAAAACCAAGATCCGGGTCATTGTCAGTGTGCCCAACAACCAGCTTCT
TGCAATTGGGTCCTCTAACACCACCGCAGCTTCTTGGATTGGTAAAAATG
TTATTGCTTATTACCCTGAAACTCTCATTACTGCCATTGCTGTAGGTGAT
GAGGTCTTAACAACTGTACCCTCTTCAGCTCCAATTTTACTTCCAGCCAT
TGAGTCCCTCTATAGTGCTTTAGTGGCTGCAAATTTGCACACCCAGATC
back to top