CK932997
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932997 vs. ExPASy Swiss-Prot
Match: H1_SOLPN (Histone H1 OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.025e-25 Identity = 56/70 (80.00%), Postives = 63/70 (90.00%), Query Frame = 1 Query: 244 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 +HPPYFQMI EAL AL +K GSSPYA+AKYME+KHKDELPANFRKIL +QLK+ AAKG LIKI+ASYKLS Sbjct: 48 THPPYFQMIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLS 117
BLAST of CK932997 vs. ExPASy Swiss-Prot
Match: H1_MAIZE (Histone H1 OS=Zea mays PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 6.659e-17 Identity = 40/70 (57.14%), Postives = 57/70 (81.43%), Query Frame = 1 Query: 244 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 +H PY +M++EA+T+L++++GSS YAIAK++E+KHK +LP NFRK+L VQLK A G L K++ SYKLS Sbjct: 49 THLPYAEMVSEAITSLKERTGSSSYAIAKFVEDKHKAKLPPNFRKLLNVQLKKLVAGGKLTKVKNSYKLS 118
BLAST of CK932997 vs. ExPASy Swiss-Prot
Match: H1_WHEAT (Histone H1 OS=Triticum aestivum PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16 Identity = 38/70 (54.29%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 244 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 +HP Y +M++EA+ AL+++SGSS AI K++E+KHK LPANFRKIL Q+K A G L K++ SYKL+ Sbjct: 54 AHPSYAEMVSEAIAALKERSGSSTIAIGKFIEDKHKAHLPANFRKILLTQIKKLVAAGKLTKVKGSYKLA 123
BLAST of CK932997 vs. ExPASy Swiss-Prot
Match: H1_SOLLC (Histone H1 OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.813e-14 Identity = 36/69 (52.17%), Postives = 53/69 (76.81%), Query Frame = 1 Query: 244 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 450 +HPPYF+MI +A+ L++++GSS +AI K++EEK K LP+NF+K+L QLK F A L+K++ SYKL Sbjct: 55 THPPYFEMIKDAIVTLKERTGSSQHAITKFIEEKQK-SLPSNFKKLLLTQLKKFVASEKLVKVKNSYKL 122
BLAST of CK932997 vs. ExPASy Swiss-Prot
Match: H1_PEA (Histone H1 OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.368e-14 Identity = 39/70 (55.71%), Postives = 54/70 (77.14%), Query Frame = 1 Query: 244 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKLS 453 SHP Y +MI +A+ +L++K+GSS YAIAK++EEK K +LPANF+K+L LK A G LIK++ S+KLS Sbjct: 61 SHPTYEEMIKDAIVSLKEKNGSSQYAIAKFIEEKQK-QLPANFKKLLLQNLKKNVASGKLIKVKGSFKLS 129
BLAST of CK932997 vs. ExPASy Swiss-Prot
Match: H1_EUPES (Histone H1 OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.368e-14 Identity = 35/69 (50.72%), Postives = 55/69 (79.71%), Query Frame = 1 Query: 244 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 450 SHP +F+MI++A++ L++++GSS YAI K++E+KHK +LP+NFRK+L LK A G L+K++ S+KL Sbjct: 50 SHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHK-QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKL 117
BLAST of CK932997 vs. ExPASy Swiss-Prot
Match: H11_ARATH (Histone H1.1 OS=Arabidopsis thaliana GN=At1g06760 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.005e-13 Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 1 Query: 244 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 450 SHP Y +MI +A+ L++++GSS YAI K++EEK K ELP FRK+L + LK A G L+K++AS+KL Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKRK-ELPPTFRKLLLLNLKRLVASGKLVKVKASFKL 128
BLAST of CK932997 vs. ExPASy Swiss-Prot
Match: H12_ARATH (Histone H1.2 OS=Arabidopsis thaliana GN=At2g30620 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.833e-13 Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 1 Query: 244 SHPPYFQMITEALTALQDKSGSSPYAIAKYMEEKHKDELPANFRKILAVQLKHFAAKGNLIKIRASYKL 450 SHP Y +MI +A+ L++++GSS YAI K++EEKHK LP FRK+L V LK A L+K++AS+K+ Sbjct: 61 SHPTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKHK-SLPPTFRKLLLVNLKRLVASEKLVKVKASFKI 128 The following BLAST results are available for this feature:
BLAST of CK932997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932997 ID=CK932997; Name=CK932997; organism=Citrus sinensis; type=EST; length=875bpback to top |