CK933001

Overview
NameCK933001
Unique NameCK933001
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10255 contig Csv1_Contig10255:375..1142. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK933001 vs. ExPASy Swiss-Prot
Match: PLZ12_LUPPO (Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.466e-56
Identity = 106/167 (63.47%), Postives = 135/167 (80.84%), Query Frame = 3 
Query:   57 DATFE*KNDIAKAVEEELEKAMSHYGYEIVQTLIVDIEPDEHVKRAMNEINAAARMRLAANEKAEAEKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLAFSENVPGTSSKDVMDMVLVTQYFDTMKEIGASSKTNSVFIPHGPGAVKDIASQIREGLLQA 557
            D  FE K ++AK+V EELEK M  YGY I   L+VDI PD+ V+RAMNEINAA RM+LA+  K EAEKILQ+KRAE EAE+KYL G+G+ARQRQAI DGLR+++L FS  V GTS+K+VMD++++TQYFDT+K++G SSK  +VFIPHGPG V+DI  QIR GL+++
Sbjct:    4 DDLFEQKGEVAKSVLEELEKVMGEYGYNIEHILMVDIIPDDSVRRAMNEINAAQRMQLASLYKGEAEKILQVKRAEAEAEAKYLGGVGVARQRQAITDGLRENILNFSHKVEGTSAKEVMDLIMITQYFDTIKDLGNSSKNTTVFIPHGPGHVRDIGEQIRNGLMES 170
The following BLAST results are available for this feature:
BLAST of CK933001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PLZ12_LUPPO3.466e-5663.47Protein PPLZ12 OS=Lupinus polyphyllus GN=PPLZ12 PE... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004349_A05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933001 ID=CK933001; Name=CK933001; organism=Citrus sinensis; type=EST; length=767bp
GGGCCAAGCGTATGTCCTTGTATGTTATTAGGGCAAGTGTACCAAAGCTG
GNNNTGGATGCAACCTTTGAGTAGAAGAACGACATAGCCAAAGCTGTGGA
AGAGGAACTCGAAAAGGCCATGTCTCATTATGGTTATGAGATAGTTCAGA
CTCTCATCGTAGATATTGAACCAGATGAACATGTGAAGAGAGCAATGAAT
GAGATCAATGCAGCGGCCAGAATGAGGCTGGCTGCAAATGAGAAAGCGGA
AGCAGAGAAAATATTGCAGATCAAGCGTGCTGAAGGAGAAGCAGAATCAA
AGTATTTGGCAGGCCTCGGTATTGCACGTCAGCGTCAGGCCATTGTTGAT
GGCCTGAGGGATAGCGTGCTAGCCTTCTCTGAGAATGTACCTGGAACATC
TTCAAAGGATGTCATGGACATGGTTCTGGTCACCCAGTATTTTGATACCA
TGAAGGAAATTGGTGCCTCCTCAAAGACTAACTCTGTGTTCATCCCCCAT
GGACCTGGTGCTGTCAAAGACATTGCGTCGCAGATCAGGGAAGGTCTCCT
TCAGGCCAATGCTACCACGTAGTGAGTTTGTGCCACCTCAAAGTCAAACT
CTGTTTCATCCCACATGGAGCGGGGGCTAATCTTCCAGTTTGGATATGTT
TTTATGTAGCTTGAAGTTGTGAAGAAGTTTCGTAATTGCCTGTAGTACCA
TCTAGCATATTATGGGAAAGAAGTTTCTGTCATCAGGTAAATAAAGAATG
GTAAATAATGGTAGATA
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