CK933004

Overview
NameCK933004
Unique NameCK933004
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length596
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:87..682. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.889e-68
Identity = 121/191 (63.35%), Postives = 141/191 (73.82%), Query Frame = 2
Query:   23 EXEHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            E EH  KA GWA+RDSSG LSPFNF RRETG++DV  KVLYCGICH+DL  +KNEWGFS +P+VPGHEI GEVTE                     +C SCE+C + LENYCPK ILTY +   DG+ T+GGYSD MVA+E +IVR PD++PLD AAPLLCAGIT YSPL+YFGL + G HVG+VGLGGLG
Sbjct:    4 EQEHRKKASGWAARDSSGVLSPFNFYRRETGEKDVTFKVLYCGICHSDLHMVKNEWGFSTYPLVPGHEIVGEVTEVGSKVQKFKVGDRVGVGCIVGSCRSCENCTDHLENYCPKQILTYGAKYYDGSTTYGGYSDIMVADEHFIVRIPDNLPLDGAAPLLCAGITTYSPLRYFGLDKPGMHVGVVGLGGLG 194          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 6.717e-66
Identity = 112/196 (57.14%), Postives = 145/196 (73.98%), Query Frame = 2
Query:    8 MANFXEXEHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            MA   E E P+KAFGWA+RD+SG LSPF+FSRRE GD+DV +K+LYCG+CH+DL  +KN+WGF+ +P+VPGHEI G VT+                     +C +CE+C  DLE YCPK + TY+S    GT T+GGYSD +V ++RY+V+FPD++PLDA APLLCAGITVYSP+KY+G+ E GKH+G+ GLGGLG
Sbjct:    1 MAKSPETELPLKAFGWAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHEIVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNS-PYKGTRTYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLG 195          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 8.773e-66
Identity = 117/191 (61.26%), Postives = 136/191 (71.20%), Query Frame = 2
Query:   23 EXEHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            E  HP KAFGWA+RD+SG LSP  FSRR TG++DV  KVLYCGICH+DL  IKNEWG +++P +PGHEI G VTE                     +C SCESC N LENYCPKMILTY S   DGT+T+GGYSD MV  E + VR PD+M LDA APLLCAG+TVYSPLK+F L + G H+G+VGLGGLG
Sbjct:    7 ENVHPQKAFGWAARDTSGTLSPLKFSRRATGEQDVTFKVLYCGICHSDLHYIKNEWGNAVYPAIPGHEIVGVVTEVGNKVQNFKVGDKVGVGCMVGSCRSCESCENHLENYCPKMILTYGSTYYDGTLTYGGYSDIMVVEEHFAVRIPDNMALDATAPLLCAGVTVYSPLKHFELDKPGLHIGVVGLGGLG 197          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.146e-65
Identity = 115/191 (60.21%), Postives = 142/191 (74.35%), Query Frame = 2
Query:   23 EXEHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            E E  V+AFGWA+RDSSGHLSPF FSRR+TG+E+VR+KVLYCGICH+DL  +KNEW  S++P+VPGHEI GEV+E                     +C +CESC  D ENYC K I TY+ ++ DGTI +GGYSDH+V +ERY V+ P ++PL +AAPLLCAGI++YSP+KYFGL    KHVGIVGLGGLG
Sbjct:    7 EKEQSVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLVPGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHHDGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGIVGLGGLG 197          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.496e-65
Identity = 107/196 (54.59%), Postives = 143/196 (72.96%), Query Frame = 2
Query:    8 MANFXEXEHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            MA   E EHP K FGW +RD SG LSPF+FSRR+ G+ DV +K+L+CG+CHTDL  IKN+WG+S +P+VPGHEI G  T+                     +C SCESC  DLENYCP+M  TY++I +DGT  +GGYS+++V ++R+++RFP+++P D+ APLLCAGITVYSP+KY+G+ E GKH+G+ GLGGLG
Sbjct:    1 MAKSPETEHPNKVFGWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPVVPGHEIVGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKNYGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGGLG 196          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 4.814e-64
Identity = 114/196 (58.16%), Postives = 137/196 (69.90%), Query Frame = 2
Query:    8 MANFXEXEHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            MA   E EHPVKA GWA+ D+SG  SPFNFSRR TG+ DV+ +VLYCG+CH+DL  +KNEWG + +P+VPGHEI G VTE                     +C  C+ C+NDLENYC K ILTY +   DGTI  GGYSD MVA+E +I+R+P++ PLDA APLLCAGIT YSPLKYFGL + G  VG+ GLGGLG
Sbjct:    1 MAKSPETEHPVKALGWAATDNSGTFSPFNFSRRATGERDVQFRVLYCGVCHSDLHMVKNEWGVTHYPIVPGHEIVGIVTEVGSKVEKVKIGDKVGVGVLVGSCRQCDQCSNDLENYCYKQILTYGAPYLDGTIARGGYSDIMVADEHFIIRWPENFPLDAGAPLLCAGITTYSPLKYFGLDKPGLRVGVNGLGGLG 196          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: MTDH_APIGR (Mannitol dehydrogenase OS=Apium graveolens GN=MTD PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 6.951e-63
Identity = 112/196 (57.14%), Postives = 140/196 (71.43%), Query Frame = 2
Query:    8 MANFXEXEHPVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            MA   E EHPVKAFGWA+RD++G LSPF FSRR TG++DVRLKVL+CG+CH+D   I N WGF+ +P+VPGHEI G VTE                     +C SCESC ++ E++C   I TY SI  DGT+T GGYSD MVA+E +I+R+P ++PLD+ APLLCAGIT YSPLKY+GL + G  +G+VGLGGLG
Sbjct:    1 MAKSSEIEHPVKAFGWAARDTTGLLSPFKFSRRATGEKDVRLKVLFCGVCHSDHHMIHNNWGFTTYPIVPGHEIVGVVTEVGSKVEKVKVGDNVGIGCLVGSCRSCESCCDNRESHCENTIDTYGSIYFDGTMTHGGYSDTMVADEHFILRWPKNLPLDSGAPLLCAGITTYSPLKYYGLDKPGTKIGVVGLGGLG 196          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 239.195 bits (609), Expect = 1.186e-62
Identity = 109/185 (58.92%), Postives = 135/185 (72.97%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            +AFG A++D+SG LSPF+F+RRETG++DVR KVL+CGICH+DL  +KNEWG S +P+VPGHEI G VTE                     +C SC+SC   +ENYCPK I TY     D TIT+GGYSDHMV  E +++R PD++PLDAAAPLLCAGITVYSP+KY GL + G H+G+VGLGGLG
Sbjct:    8 EAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVPGHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYDNTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVVGLGGLG 192          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH5_ORYSJ (Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza sativa subsp. japonica GN=CAD5 PE=3 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 4.506e-62
Identity = 108/187 (57.75%), Postives = 136/187 (72.73%), Query Frame = 2
Query:   35 PVKAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            P  A G A+RD+SGHLSP   SRR TGD+DV +K+LYCGICH+DL +IKNEW  + +P+VPGHEIAG VTE                     +CHSC+SC   LEN+CP +I TY+S++ DGT+T+GGYS  +V +ER++VRFP++MPLD  APLLCAGITVYSP+KY GL    KHVG++GLGGLG
Sbjct:    3 PTAAAGLAARDASGHLSPLTISRRSTGDDDVVIKILYCGICHSDLHSIKNEWKNATYPLVPGHEIAGVVTEAGKNVTKFKGGDKVGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFPEAMPLDKGAPLLCAGITVYSPMKYHGLNVPSKHVGVLGLGGLG 189          
BLAST of CK933004 vs. ExPASy Swiss-Prot
Match: CADH3_ORYSJ (Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 5.885e-62
Identity = 107/185 (57.84%), Postives = 136/185 (73.51%), Query Frame = 2
Query:   41 KAFGWASRDSSGHLSPFNFSRRETGDEDVRLKVLYCGICHTDLANIKNEWGFSLFPMVPGHEIAGEVTEXXXXXXXXXXXXXXXXXXXXXACHSCESCANDLENYCPKMILTYSSINTDGTITFGGYSDHMVANERYIVRFPDSMPLDAAAPLLCAGITVYSPLKYFGLPEQGKHVGIVGLGGLG 595
            +A G A+RDSSGHLSPF  SRR TGD+DV +K+L+CGICH+DL  IKNEW  S++P+VPGHEIAG VTE                     +C SCESC N  EN+CP+ + TY+S++ DGT+T+GGYS  +V +ER++V FP++MPLD  APLLCAGITVY+P+KY GL   GKHVG++GLGGLG
Sbjct:   15 QAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVPGHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLGLGGLG 199          
The following BLAST results are available for this feature:
BLAST of CK933004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
MTDH_FRAAN1.889e-6863.35Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MEDSA6.717e-6657.14Probable mannitol dehydrogenase OS=Medicago sativa... [more]
MTDH_MESCR8.773e-6661.26Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
CADH6_ARATH1.146e-6560.21Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH9_ARATH1.496e-6554.59Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
GEDH1_OCIBA4.814e-6458.16Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
MTDH_APIGR6.951e-6357.14Mannitol dehydrogenase OS=Apium graveolens GN=MTD ... [more]
CADH8_ARATH1.186e-6258.92Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH5_ORYSJ4.506e-6257.75Putative cinnamyl alcohol dehydrogenase 5 OS=Oryza... [more]
CADH3_ORYSJ5.885e-6257.84Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004348_G11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIF_G11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933004 ID=CK933004; Name=CK933004; organism=Citrus sinensis; type=EST; length=596bp
GGGGAAAATGGCAAACTTTTANGAANANGAACATCCAGTAAAGGCCTTCG
GGTGGGCATCCCGAGACAGCTCCGGCCATCTCTCCCCATTCAACTTCTCC
AGAAGGGAAACGGGTGATGAGGATGTGAGGCTGAAGGTATTGTATTGTGG
GATCTGCCATACTGATCTCGCCAACATCAAGAATGAATGGGGCTTCTCTC
TCTTCCCTATGGTTCCTGGGCATGAAATTGCAGGGGAAGTGACAGAAGTT
GGTAGCAAAGTAAGAAAGGTTAAAGTGGGAGATAAAGTTGGAGTTGGATG
CATGGTTGGTGCATGCCACAGCTGCGAGAGCTGTGCCAATGACCTTGAAA
ATTACTGTCCGAAAATGATACTCACCTACAGTTCCATTAACACTGACGGA
ACAATCACATTCGGAGGCTACTCTGATCACATGGTTGCCAATGAGCGCTA
CATTGTTCGATTCCCTGATAGCATGCCCCTTGATGCTGCTGCTCCTCTGC
TTTGCGCCGGGATTACCGTGTACAGTCCATTGAAATACTTTGGACTACCA
GAACAAGGAAAGCATGTAGGCATCGTTGGCCTTGGCGGGCTTGGTC
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