CK933014
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS23_FRAAN (40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 5.694e-76 Identity = 139/142 (97.89%), Postives = 141/142 (99.30%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGKTRGMGA RKLK+HRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLI+NGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 1 MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS23_EUPES (40S ribosomal protein S23 OS=Euphorbia esula GN=RPS23 PE=2 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 4.820e-75 Identity = 138/142 (97.18%), Postives = 139/142 (97.89%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGKT GMGA RKLKSHRR QRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLI+NGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 1 MGKTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS232_ARATH (40S ribosomal protein S23-2 OS=Arabidopsis thaliana GN=RPS23B PE=2 SV=2) HSP 1 Score: 274.633 bits (701), Expect = 3.454e-73 Identity = 136/142 (95.77%), Postives = 137/142 (96.48%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGKTRGMGAGRKLK R QRWADK YKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLI+NGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 1 MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS231_ARATH (40S ribosomal protein S23-1 OS=Arabidopsis thaliana GN=RPS23A PE=2 SV=2) HSP 1 Score: 265.774 bits (678), Expect = 1.605e-70 Identity = 133/142 (93.66%), Postives = 135/142 (95.07%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGKTRGMGAGRKLK R QRWADK YKKS+ GNEWKKPFA SSHAKGIVLEKIGIEAKQPNSAIRKCARVQLI+NGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS Sbjct: 1 MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 142
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS23_LUMRU (40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.241e-63 Identity = 115/143 (80.42%), Postives = 127/143 (88.81%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGK RG+ RKLK+HRR QRW DK YKKSHLG WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLI+NGKKI AFVP DGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+K+KKE+PRS Sbjct: 1 MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWKSNPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVASVSLLALYKQKKERPRS 143
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS23_DERVA (40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.231e-62 Identity = 115/143 (80.42%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGK RG+ RK +SHRR QRW DK YKK+HLG WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLI+NGKKI AFVP DGCLNYIEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 1 MGKPRGLRTARKHRSHRRDQRWHDKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS23_SPOFR (40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.043e-61 Identity = 112/143 (78.32%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGK RG+ RK +HRR QRWADK YKK+H+G WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLI+NGKK+ AFVP DGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS23_PAPDA (40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.043e-61 Identity = 112/143 (78.32%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGK RG+ RK +HRR QRWADK YKK+H+G WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLI+NGKK+ AFVP DGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS23_DROME (40S ribosomal protein S23 OS=Drosophila melanogaster GN=RpS23 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.322e-61 Identity = 114/143 (79.72%), Postives = 125/143 (87.41%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGK RG+ RK +HRR QRWADK YKK+HLG WK PF G+SHAKGIVLEK+G+EAKQPNSAIRKC RVQLI+NGKKI AFVP DG LNYIEENDEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS Sbjct: 1 MGKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143
BLAST of CK933014 vs. ExPASy Swiss-Prot
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.962e-61 Identity = 111/143 (77.62%), Postives = 126/143 (88.11%), Query Frame = 3 Query: 81 MGKTRGMGAGRKLKSHRRRQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIENGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 506 MGK +G+ A RKLK+HR+ QRW DK YKK+HLG WK PF +SHAKGIVLEK+G+EAKQPNSAIRKC RVQLI+NGKKI AFVPNDGCLN+IEENDEVL+AGFGRKGHAVGDIPGVRFK+VKV+ SL+ALFK KKE+PRS Sbjct: 1 MGKPKGIRAARKLKTHRQAQRWNDKGYKKAHLGTRWKANPFGTASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143 The following BLAST results are available for this feature:
BLAST of CK933014 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933014 ID=CK933014; Name=CK933014; organism=Citrus sinensis; type=EST; length=699bpback to top |