CK933033
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAEA_NICSY (Photosystem I reaction center subunit IV A, chloroplastic OS=Nicotiana sylvestris GN=PSAEA PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.705e-32 Identity = 82/144 (56.94%), Postives = 92/144 (63.89%), Query Frame = 3 Query: 84 MASCNMASAASGFSL-TPNVATNVNSGSKSNMLFFPPKNNSSNSFRLVVRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 512 MASCNMASAAS F + TPNVA+N N+ S++ MLFF KN S + RLVVRA+ V+ILR+ESYWY G GSVVA DQDP +RYPVVVRFNKVNYANVSTNNYALDEIEEVK Sbjct: 1 MASCNMASAASNFLVATPNVASNTNT-SRTTMLFFSSKNYGSTAPRLVVRAAEEAAPPAAAATAEPAEAPVKAAKPPPIGPKRGTK--VRILRKESYWYKGTGSVVACDQDPNTRYPVVVRFNKVNYANVSTNNYALDEIEEVK 141
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAEB_NICSY (Photosystem I reaction center subunit IV B, chloroplastic OS=Nicotiana sylvestris GN=PSAEB PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31 Identity = 79/146 (54.11%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 84 MASCNMASAASGFSL-TPNVATNVNSGSKSNMLFFPP-KNNSSNSF-RLVVRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 512 MAS +MASAASGF + TPN+AT+ N+ +++MLFF KNN++ +F RLVVRA+ V++LR+ESYWY G+GSVVAVDQDP +RYPVVVRFNKVNYANVSTNNYALDE+EEVK Sbjct: 1 MASSSMASAASGFMVATPNIATS-NTAPRTSMLFFSSSKNNTTTNFPRLVVRAAEEAAPPAATATAEGEAPPAKAAKPPPIGPKRGTK--VRVLRKESYWYKGVGSVVAVDQDPNTRYPVVVRFNKVNYANVSTNNYALDEVEEVK 143
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAE2_ARATH (Photosystem I reaction center subunit IV B, chloroplastic OS=Arabidopsis thaliana GN=PSAE2 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.915e-24 Identity = 69/146 (47.26%), Postives = 81/146 (55.48%), Query Frame = 3 Query: 99 MASAASGFSLTPNVATNVNSGSKSN---MLFFPPKNNSSNSFRLVVRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 512 M SAA+GF LT NV + GS + + F P ++ S RLVVRA+ VKILR+ESYWY +GSVVAVDQDPK+RYPVVVRF KVNYAN+STNNYALDE+EEVK Sbjct: 3 MTSAATGFILTANVPAAIGGGSSKSTTIVSFLPMRSFGS---RLVVRAAEDTPPATASSDSSSTTAAAAPAKVPAAKAKPPPIGPKRGSKVKILRKESYWYKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEVK 145
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAE_HORVU (Photosystem I reaction center subunit IV, chloroplastic OS=Hordeum vulgare GN=PSAE PE=1 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 68/148 (45.95%), Postives = 77/148 (52.03%), Query Frame = 3 Query: 84 MASCNMASAASGFSLTPNVATNVNSGSKSNMLFFPPKNNSSNSFRLVVRA------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 509 MAS NMASA S F L + + N G S + F P ++ +LV RA + VKILRRESYWYNG GSVV VDQDP +RYPVVVRF KVNYA VSTNNYALDEI+EV Sbjct: 1 MASTNMASATSRFMLAAGIPSGANGGVSSRVSFLP---SNRLGLKLVARAEEPTAAAPAEPAPAADEKPEAAVATKEPAKAKPPPRGPKRGTKVKILRRESYWYNGTGSVVTVDQDPNTRYPVVVRFAKVNYAGVSTNNYALDEIKEV 145
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAE_SPIOL (Photosystem I reaction center subunit IV, chloroplastic OS=Spinacia oleracea GN=PSAE-1 PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.600e-22 Identity = 48/55 (87.27%), Postives = 54/55 (98.18%), Query Frame = 3 Query: 345 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 509 V+I+R+ESYWY G+GSVVAVDQDPK+RYPVVVRFNKVNYANVSTNNYALDEI+EV Sbjct: 70 VRIMRKESYWYKGVGSVVAVDQDPKTRYPVVVRFNKVNYANVSTNNYALDEIQEV 124
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAE1_ARATH (Photosystem I reaction center subunit IV A, chloroplastic OS=Arabidopsis thaliana GN=PSAE1 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.089e-22 Identity = 66/142 (46.48%), Postives = 80/142 (56.34%), Query Frame = 3 Query: 99 MASAASGFSLTPNVATNVN-SGSKSNMLFFPPKNNSSNSFRLVVRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEV 509 M +A++ F L NV + S S+S++ F P +N S RLVVRA+ VKILRRESYW+ +GSVVAVDQDPK+RYPVVVRF KVNYAN+STNNYALDE+EEV Sbjct: 3 MTTASTVFVLPANVTSVAGASSSRSSVSFLPMRNAGS---RLVVRAAEDPAPASSSSKDSPAAAAAPDGATATKPKPPPIGPKRGSKVKILRRESYWFKNVGSVVAVDQDPKTRYPVVVRFAKVNYANISTNNYALDEVEEV 141
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAE_THEEB (Photosystem I reaction center subunit IV OS=Thermosynechococcus elongatus (strain BP-1) GN=psaE PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 345 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 509 VKILR ESYWYN +G+V +VDQ P +YPV+VRF+KVNY + V+TNN+AL E++EV Sbjct: 8 VKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAE_SYNEN (Photosystem I reaction center subunit IV OS=Synechococcus elongatus naegeli GN=psaE PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.315e-13 Identity = 36/62 (58.06%), Postives = 47/62 (75.81%), Query Frame = 3 Query: 345 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNY-------ANVSTNNYALDEIEEV 509 VKILR ESYWYN +G+V +VDQ P +YPV+VRF+KVNY + V+TNN+AL E++EV Sbjct: 8 VKILRPESYWYNEVGTVASVDQTPGVKYPVIVRFDKVNYTGYSGSASGVNTNNFALHEVQEV 69
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAE_GLOVI (Photosystem I reaction center subunit IV OS=Gloeobacter violaceus GN=psaE PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.024e-13 Identity = 31/56 (55.36%), Postives = 45/56 (80.36%), Query Frame = 3 Query: 345 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 512 V+ILR+ESYWY +G+V +VD+ K+ YPV VRF KVNY+ ++TNN+ + E+EEV+ Sbjct: 9 VRILRKESYWYREVGTVASVDKSEKTIYPVTVRFEKVNYSGINTNNFGVSELEEVE 64
BLAST of CK933033 vs. ExPASy Swiss-Prot
Match: PSAE_CYAPA (Photosystem I reaction center subunit IV OS=Cyanophora paradoxa GN=psaE PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.158e-13 Identity = 33/56 (58.93%), Postives = 47/56 (83.93%), Query Frame = 3 Query: 345 VKILRRESYWYNGIGSVVAVDQDPKSRYPVVVRFNKVNYANVSTNNYALDEIEEVK 512 V+ILR+ESYWY IG+V ++DQ +YPV+VRF KVNY+NV++NN++LDE+ EV+ Sbjct: 8 VRILRKESYWYQEIGTVASIDQSG-IKYPVIVRFEKVNYSNVNSNNFSLDEVVEVE 62 The following BLAST results are available for this feature:
BLAST of CK933033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933033 ID=CK933033; Name=CK933033; organism=Citrus sinensis; type=EST; length=692bpback to top |