CK933068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: VP202_ARATH (Vacuolar protein sorting-associated protein 20 homolog 2 OS=Arabidopsis thaliana GN=VPS20.2 PE=2 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.481e-73 Identity = 149/199 (74.87%), Postives = 161/199 (80.90%), Query Frame = 3 Query: 177 MGNLFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVP-TEGPSEEQEKLDLPNVPTKVPVAS 770 MGNLFVKKPKIT+VDRAILSLKTQRRKL QYQQQL+ VIEAEKQAARDLI VD WLINVEQQLADIEL SKQKAVFESLK G NAIKAIQSE+NL+DVQKLMDDT EAKAYQDE++AILGEKLSAEDEEEILAEFDNLE+ L+V++MPEVP TE EE EK+DLP+VPTK PVAS Sbjct: 1 MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALLALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDDVQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTELMPEEPEKMDLPDVPTKAPVAS 199
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: VP201_ARATH (Vacuolar protein sorting-associated protein 20 homolog 1 OS=Arabidopsis thaliana GN=VPS20.1 PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 3.582e-72 Identity = 145/198 (73.23%), Postives = 161/198 (81.31%), Query Frame = 3 Query: 177 MGNLFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEGPSEEQEKLDLPNVPTKVPVAS 770 MGNLFVKKP+IT+VDRAILSLKTQRRKL QYQQ+L+ VIEAEKQAARDLI VD W+INVEQQL DIEL SKQKAVFESLK G +AIKAIQSE++L+DVQKLMDDT +AKAYQDE+NAILGEKLSAEDEE+ILAEFDNLE+QL+V EMPEVPT+ SEE EKLDLP+VPTK PVAS Sbjct: 1 MGNLFVKKPQITEVDRAILSLKTQRRKLGQYQQKLEKVIEAEKQAARDLIREKRKDRALLALRKKRTQEELLKQVDQWVINVEQQLTDIELTSKQKAVFESLKQGNSAIKAIQSELDLDDVQKLMDDTADAKAYQDELNAILGEKLSAEDEEDILAEFDNLESQLIVDEMPEVPTK-ESEESEKLDLPDVPTKTPVAS 197
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: CHMP6_DANRE (Charged multivesicular body protein 6 OS=Danio rerio GN=chmp6 PE=2 SV=3) HSP 1 Score: 117.472 bits (293), Expect = 8.646e-26 Identity = 68/201 (33.83%), Postives = 108/201 (53.73%), Query Frame = 3 Query: 177 MGNLFVKKP--KITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEGPSEEQEKLDLPNVPTKVPVASR 773 MGNLF KK ++T+ DRA+L LK QR KL QYQ+++ ++ E+Q A+ L+ + + N+E+ + DIE A + V E LK G + +K + +++E+V+K+MD+T +A YQ +I+ +L L+ EDEE +LAE + + E+PEVP E +LP VP + PV + Sbjct: 1 MGNLFGKKKATRVTEQDRAVLQLKQQRDKLKQYQKRITLQMDKERQLAKQLLKDGKKDKALLLLKKKRYQDQLLEKTENQISNLERMVQDIEFAQIEMKVIEGLKVGNDCLKKMHEVLSIEEVEKIMDETHDAIEYQKQIDEMLAGSLTQEDEEAVLAELEAITQGEADLELPEVPGE---------ELPEVPEQEPVREK 192
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: CHM6A_XENLA (Charged multivesicular body protein 6-A OS=Xenopus laevis GN=chmp6-A PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 8.092e-24 Identity = 65/201 (32.34%), Postives = 109/201 (54.23%), Query Frame = 3 Query: 177 MGNLFVKK--PKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEG-PSEEQEKLDLPNVPTKVPVAS 770 MGNLF +K ++T+ D+A+L LK QR KL QYQ+++ ++ E++ A+ L+ D + N+E+ + DIE A + V E LK G +K + +++E+V+++MD+T+E YQ +I+ +L L+AEDEE IL E + + + + E+PE P+E P EK + N P +A+ Sbjct: 1 MGNLFARKRRSRVTEQDKAVLQLKQQRDKLKQYQKKITLQLQRERELAKQLLHDGKKEKAKLLLKKKRYQEQLLEKTDNQISNLEKMVEDIEFAQIEMKVIEGLKVGNECLKKMHEVMSIEEVERIMDETQEGIEYQRQIDEMLSGSLTAEDEEAILEELEAITQEDL--ELPEAPSEPLPDTIPEKQAVKNKPKPQMIAA 199
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: CHM6B_XENLA (Charged multivesicular body protein 6-B OS=Xenopus laevis GN=chmp6-B PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 5.245e-23 Identity = 66/201 (32.84%), Postives = 110/201 (54.73%), Query Frame = 3 Query: 177 MGNLFVKK--PKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEGPSEE-QEKLDLPNVPTKVPVAS 770 MGNLF +K ++T+ D+A+L LK QR KL QYQ+++ ++ E++ A+ L+ D + N+E+ + DIE A + V E LK G +K + +++E+V+K+M++T+E YQ +I+ +L L+AEDEE IL E + + + + E+PE P+E S+ EK + N P VA+ Sbjct: 1 MGNLFARKRRSRVTEQDKAVLQLKQQRDKLKQYQKKITLQLQRERELAKQLLHDGKKEKAKLLLKKKRYQEQLLEKTDNQISNLEKMVDDIEFAQIEMKVIEGLKVGNEWLKKMHEVMSIEEVEKIMEETQEGIEYQRQIDEMLSGSLTAEDEEAILEELEAITQEDL--ELPEAPSEPLSDTVPEKQAVKNRPKPQLVAA 199
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: CHMP6_DICDI (Charged multivesicular body protein 6 OS=Dictyostelium discoideum GN=chmp6 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.400e-22 Identity = 65/182 (35.71%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 195 KKPKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEGPSEEQEKLDLP 740 K+ KI+ DRA+L+LK QR KL YQ Q+ E A++ L N+E+ +A++E A Q +FESLK G ++K IQ E++LEDV+ LM++T EA YQ++I+ L K S E+E+++L E D +E QL Q+ P+V P + K++LP Sbjct: 14 KEDKISKTDRAVLNLKIQRDKLKNYQTQV-----LEIAIAKECSKAGKKNQALLALKKKKYQEKMLDESFANLQNIEELIANVEQAEIQVRIFESLKQGNESLKEIQKEMSLEDVENLMEETAEAIQYQNDISEALSGKFSKEEEDDLLNELDEMEKQLNAQQYPKV----PETQLPKIELP 186
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: CHMP6_CHICK (Charged multivesicular body protein 6 OS=Gallus gallus GN=CHMP6 PE=2 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 4.440e-22 Identity = 63/201 (31.34%), Postives = 107/201 (53.23%), Query Frame = 3 Query: 177 MGNLFVKK--PKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEG-PSEEQEKLDLPNVPTKVPVAS 770 MGNLF +K ++T+ D+A+L LK QR KL QYQ+++ +E E++ AR L+ D + N+E+ + DIE + V E LK G + + +++E+V++++ +T++A YQ +I+ IL L+ EDE+ IL E + + + + E+P+VP+E P E E + N P VA+ Sbjct: 1 MGNLFGRKRRSRVTEQDKAVLQLKQQRDKLRQYQKRISLGLERERELARQLLKEGKKEKAMLLLKKKRYQEQLLDKTDNQISNLERMVQDIEFTQIEMKVIEGLKIGNECLNKMHQVMSIEEVERIIGETQDAVEYQRQIDEILAGSLTEEDEDAILEELNAITQEQL--ELPDVPSEPLPEEPPEATPVKNRPKPELVAA 199
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: CHMP6_HUMAN (Charged multivesicular body protein 6 OS=Homo sapiens GN=CHMP6 PE=1 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 2.436e-20 Identity = 60/201 (29.85%), Postives = 103/201 (51.24%), Query Frame = 3 Query: 177 MGNLFVKKP--KITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEGPSEEQEKLDLPNVPTKVPVASR 773 MGNLF +K ++T+ D+AIL LK QR KL QYQ+++ +E E+ AR L+ + + ++E + IE + V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L + EDE+ IL E + + + E+PEVP+E E+ +P VPV +R Sbjct: 1 MGNLFGRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKERAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQI--ELPEVPSEPLPEK--------IPENVPVKAR 191
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: CHMP6_PONAB (Charged multivesicular body protein 6 OS=Pongo abelii GN=CHMP6 PE=2 SV=3) HSP 1 Score: 98.9821 bits (245), Expect = 3.182e-20 Identity = 60/201 (29.85%), Postives = 103/201 (51.24%), Query Frame = 3 Query: 177 MGNLFVKKP--KITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEGPSEEQEKLDLPNVPTKVPVASR 773 MGNLF +K ++T+ D+AIL LK QR KL QYQ+++ +E E+ AR L+ + + ++E + IE + V E L+ G + + +++E+V++++D+T+EA YQ +I+ +L + EDE+ IL E + + + E+PEVP+E E+ +P VPV +R Sbjct: 1 MGNLFGRKKQSRVTEQDKAILQLKQQRDKLRQYQKRIAQQLERERALARQLLRDGRKERAKLLLKKKRYQEQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQFGNECLNKMHQVMSIEEVERILDETQEAVEYQRQIDELLAGSFTQEDEDAILEELSAITQEQI--ELPEVPSEPLPEK--------IPEDVPVKAR 191
BLAST of CK933068 vs. ExPASy Swiss-Prot
Match: VPS20_SCHPO (Vacuolar protein sorting-associated protein 20 OS=Schizosaccharomyces pombe GN=vps20 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.063e-19 Identity = 61/193 (31.61%), Postives = 99/193 (51.30%), Query Frame = 3 Query: 192 VKKPKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIXXXXXXXXXXXXXXXXXXXXXXXXVDGWLINVEQQLADIELASKQKAVFESLKSGTNAIKAIQSEINLEDVQKLMDDTEEAKAYQDEINAILGEKLSAEDEEEILAEFDNLEAQLVVQEMPEVPTEGPSEEQEKLDLPNVPTKVPVAS 770 V KI D DR+ILS+K QR KL +Y ++L+ + + E AR + G L N+EQ L+ IE QK V L+ GTN I+ +Q+++ LE V ++ +D +EA +Y DE+N +L ++S + E+EI E D+L + +++ ++ G + LP+VP K + S Sbjct: 3 VNSSKINDKDRSILSIKEQRDKLLRYSKRLEKIEQLEIDIARKCLRDSDKRGALRALKAKKLYSGLITQTYGQLGNIEQLLSTIEFTLIQKDVMFGLQEGTNLIRQLQADMPLERVGRICNDRDEAMSYVDEVNDMLQGRMSRDQEDEIQEELDSLIREQEDEKVKDLEKPGFTPSTGVDVLPSVPLKNAIPS 195 The following BLAST results are available for this feature:
BLAST of CK933068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933068 ID=CK933068; Name=CK933068; organism=Citrus sinensis; type=EST; length=790bpback to top |