CK933069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PR19A_ARATH (Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana GN=PRP19A PE=1 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 8.487e-90 Identity = 163/211 (77.25%), Postives = 182/211 (86.26%), Query Frame = 1 Query: 154 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDGDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYT 786 MNC+ISGEVPEEPVVSK SGLL+EKRLI+ HI DYGKCPVTGEP T+DDIVPIKTGKIVKP+PL ASIPG+LG FQ EWD LMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDE+R LLA++ERQ +PA TSNAALSNGKR +DG+ GP KK+ GI+ +I ELTDCNAALSQQRKKRQ+P LA +DALE++T Sbjct: 1 MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVKPKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDESRQLLAEAERQ-LPAAPEVATSNAALSNGKRGIDDGEQGPNAKKMRLGISAEVITELTDCNAALSQQRKKRQIPKTLASVDALEKFT 210
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PR19B_ARATH (Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana GN=PRP19B PE=1 SV=3) HSP 1 Score: 328.561 bits (841), Expect = 2.469e-89 Identity = 167/211 (79.15%), Postives = 182/211 (86.26%), Query Frame = 1 Query: 154 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDGDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERYT 786 MNC+ISGEVP EPVVS SGLLFE+RLIERHI DYGKCPVTGEPLT+DDIVPIKTG+I+KP+ L ASIPG+LG FQNEWDGLMLSNFALEQQLHTARQELSHALYQHD+ACRVIARLKKERDEAR LLA+ ER I PA AVT+NAALSNGKRA D +LGP KKL GI+ II ELTDCNAALSQ+RKKRQ+P LA ID LER+T Sbjct: 1 MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIKPKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKKERDEARQLLAEVERHI-PAAPEAVTANAALSNGKRAAVDEELGPDAKKLCPGISAEIITELTDCNAALSQKRKKRQIPQTLASIDTLERFT 210
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PRP19_DICDI (Pre-mRNA-processing factor 19 homolog OS=Dictyostelium discoideum GN=prp19 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.563e-43 Identity = 97/210 (46.19%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 154 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDGDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALERY 783 M C+ISG EEPV+S +G ++EKRLIE++I GK P TGEPL + D++ +K GK VKPRP TA SIP ML +FQNEWD LML F L+QQ T RQEL+H++YQ+DAACRVIARL KERD ARS LA + R I+ + +N +N K P+ + + + I + + + L + RK+R +LA DA++++ Sbjct: 1 MICAISGSTTEEPVISTKTGNVYEKRLIEKYIDTNGKEPTTGEPLGLSDLITVKIGKTVKPRPTTATSIPSMLQLFQNEWDSLMLETFTLKQQHETVRQELAHSMYQYDAACRVIARLVKERDAARSALANA-RNIVQQQQQQTNNNNNNNNNKDVEMSSASTPSSSEDNL-LDSTIYKRIAEKSEELIKTRKER-THQSLAEPDAIKQF 207
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PRP19_RAT (Pre-mRNA-processing factor 19 OS=Rattus norvegicus GN=Prpf19 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 2.344e-39 Identity = 96/211 (45.50%), Postives = 125/211 (59.24%), Query Frame = 1 Query: 160 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPED-GDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERY 783 CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ G P D G+L G+TP II +L D L+ +RKKR VP L + L +Y Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGEL--------VGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKY 207
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PRP19_MOUSE (Pre-mRNA-processing factor 19 OS=Mus musculus GN=Prpf19 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.344e-39 Identity = 96/211 (45.50%), Postives = 125/211 (59.24%), Query Frame = 1 Query: 160 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPED-GDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERY 783 CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ G P D G+L G+TP II +L D L+ +RKKR VP L + L +Y Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGEL--------VGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKY 207
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PRP19_HUMAN (Pre-mRNA-processing factor 19 OS=Homo sapiens GN=PRPF19 PE=1 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.344e-39 Identity = 96/211 (45.50%), Postives = 125/211 (59.24%), Query Frame = 1 Query: 160 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPED-GDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERY 783 CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ G P D G+L G+TP II +L D L+ +RKKR VP L + L +Y Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGEL--------VGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKY 207
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PRP19_BOVIN (Pre-mRNA-processing factor 19 OS=Bos taurus GN=PRPF19 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.344e-39 Identity = 96/211 (45.50%), Postives = 125/211 (59.24%), Query Frame = 1 Query: 160 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPED-GDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDALERY 783 CSIS EVPE P VS S ++E+RLIE++I + G P+ +PL+ + ++ IK ++P+P +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ G P D G+L G+TP II +L D L+ +RKKR VP L + L +Y Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQPSVVGAGEPMDLGEL--------VGMTPEIIQKLQDKATVLTTERKKRGKTVPEELVKPEELSKY 207
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PRP19_CHICK (Pre-mRNA-processing factor 19 OS=Gallus gallus GN=PRPF19 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.384e-38 Identity = 93/193 (48.19%), Postives = 117/193 (60.62%), Query Frame = 1 Query: 160 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDGDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR 738 CSIS EVPE P VS S ++E+RLIE++I + G PV +PL+ + ++ IK ++PRP +A SIP +L Q+EWD +ML +F L QQL T RQELSHALYQHDAACRVIARL KE AR LA + Q AV S+ N A E DLG G+TP II + D L+ +RKKR Sbjct: 5 CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHPIRPRPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEVTAAREALATLKPQAGLIVPQAVPSSQ--PNVAGAGESMDLGEL-----AGMTPEIIQKPQDKATVLTTERKKR 190
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: CWF8_SCHPO (Cell cycle control protein cwf8 OS=Schizosaccharomyces pombe GN=cwf8 PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.973e-35 Identity = 84/209 (40.19%), Postives = 122/209 (58.37%), Query Frame = 1 Query: 154 MNCSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVKPRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDGDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKRQVPPALAPIDALER 780 M CSISGE P+EPV+S+ SG ++EKRLIE+ I + K PVT + T++D+VP+K V+PRP +A S+P +L +FQ EWD + L F L + L +QELS ALY DAA RVI+RL KERDEAR LA+ I S + ++ ++G + +L T + + + LS +RK+ ++ P A DA+ + Sbjct: 1 MFCSISGETPKEPVISRVSGNVYEKRLIEQVIRETSKDPVTQQECTLEDLVPVKVPDFVRPRPPSATSLPALLSLFQEEWDSVALEQFELRRNLTETKQELSTALYSLDAALRVISRLTKERDEAREALAKFSDNIGTVSSKTI-----------EVQEVEMGESDDQLKTSLRSTVEKTFQE----LSSKRKRTKLQPKWATDDAVSQ 194
BLAST of CK933069 vs. ExPASy Swiss-Prot
Match: PRP19_CAEEL (Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans GN=T10F2.4 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 9.537e-33 Identity = 85/208 (40.87%), Postives = 126/208 (60.58%), Query Frame = 1 Query: 160 CSISGEVPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLTMDDIVPIKTGKIVK-PRPLTAASIPGMLGMFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQSERQIMPAESTAVTSNAALSNGKRAPEDGDLGPAGKKLHTGITPAIIAELTDCNAALSQQRKKR--QVPPALAPIDAL 774 C ISGE+ E+PVVS+ SG +F++RLI + I + G P++ L+ D +V +K+G PR ++ SIP +L M Q+EWD +ML++F+L QQL ARQELSH+LYQHDAACRVI+RL KE AR L+ + P S V + ++ ED G++ AI+A+L + + +L+ +RK+R +P LA + L Sbjct: 5 CGISGELTEDPVVSQVSGHIFDRRLIVKFIAENGTDPISHGELSEDQLVSLKSGGTGSAPRNVSGTSIPSLLKMLQDEWDTVMLNSFSLRQQLQIARQELSHSLYQHDAACRVISRLSKELTAAREALS----TLKPHTSAKVDDDVSIDES----ED----------QQGLSEAILAKLEEKSKSLTAERKQRGKNLPEGLAKTEEL 194 The following BLAST results are available for this feature:
BLAST of CK933069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933069 ID=CK933069; Name=CK933069; organism=Citrus sinensis; type=EST; length=786bpback to top |