CK933086

Overview
NameCK933086
Unique NameCK933086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length654
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA1_RABIT (Acyl-protein thioesterase 1 OS=Oryctolagus cuniculus GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.356e-12
Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = 1
Query:  205 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 423
            VV    K  A +++LHGLGD G  W++    +  P IK+ICP AP  PV +       +WFD+  LS D  ED
Sbjct:   13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSPHIKYICPHAPVMPVTLNMNMAMPSWFDIVGLSPDSQED 85          

HSP 2 Score: 28.1054 bits (61), Expect = 1.356e-12
Identity = 16/47 (34.04%), Postives = 23/47 (48.94%), Query Frame = 3
Query:  489 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 629
            ++ +GGFS G A++LY+A           +     L  V  LS WLP
Sbjct:  112 RIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLP 147          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA1_MOUSE (Acyl-protein thioesterase 1 OS=Mus musculus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.356e-12
Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = 1
Query:  205 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 423
            VV    K  A +++LHGLGD G  W++    +  P IK+ICP AP  PV +       +WFD+  LS D  ED
Sbjct:   13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSPHIKYICPHAPVMPVTLNMNMAMPSWFDIVGLSPDSQED 85          

HSP 2 Score: 28.1054 bits (61), Expect = 1.356e-12
Identity = 16/47 (34.04%), Postives = 23/47 (48.94%), Query Frame = 3
Query:  489 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 629
            ++ +GGFS G A++LY+A           +     L  V  LS WLP
Sbjct:  112 RIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLP 147          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA1_PONAB (Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYPLA1 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.286e-12
Identity = 29/73 (39.73%), Postives = 40/73 (54.79%), Query Frame = 1
Query:  205 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 423
            +V    K  A +++LHGLGD G  W++    +    IK+ICP AP RPV +       +WFD+  LS D  ED
Sbjct:   13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNMAMPSWFDIIGLSPDSQED 85          

HSP 2 Score: 29.261 bits (64), Expect = 2.286e-12
Identity = 25/74 (33.78%), Postives = 33/74 (44.59%), Query Frame = 3
Query:  429 GLDASAAHIANLLSTEPADVKVGI-------GGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 629
            G+  +A +I  L+  E   VK GI       GGFS G A++LY+A           +     L  V  LS WLP
Sbjct:   88 GIKQAAENIKALIDQE---VKNGIPSNRIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLP 147          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA1_HUMAN (Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYPLA1 PE=1 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.969e-12
Identity = 29/73 (39.73%), Postives = 40/73 (54.79%), Query Frame = 1
Query:  205 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 423
            +V    K  A +++LHGLGD G  W++    +    IK+ICP AP RPV +       +WFD+  LS D  ED
Sbjct:   13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQED 85          

HSP 2 Score: 29.261 bits (64), Expect = 2.969e-12
Identity = 25/74 (33.78%), Postives = 33/74 (44.59%), Query Frame = 3
Query:  429 GLDASAAHIANLLSTEPADVKVGI-------GGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 629
            G+  +A +I  L+  E   VK GI       GGFS G A++LY+A           +     L  V  LS WLP
Sbjct:   88 GIKQAAENIKALIDQE---VKNGIPSNRIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLP 147          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA2_RAT (Acyl-protein thioesterase 2 OS=Rattus norvegicus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-12
Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 1
Query:  223 KHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED--------GRV*MLQQHILQTCCQQNQLMLKLVSEASAWVLQWHFTQQH 546
            +  A +++LHGLGD G SW+  L ++ LP +K+ICP AP  PV +       +WFD+  LS D PED          +  L +H ++     N+++L   S+  A  L    T  H
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPH 137          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA2_MOUSE (Acyl-protein thioesterase 2 OS=Mus musculus GN=Lypla2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-12
Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 1
Query:  223 KHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED--------GRV*MLQQHILQTCCQQNQLMLKLVSEASAWVLQWHFTQQH 546
            +  A +++LHGLGD G SW+  L ++ LP +K+ICP AP  PV +       +WFD+  LS D PED          +  L +H ++     N+++L   S+  A  L    T  H
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPH 137          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA2_HUMAN (Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-12
Identity = 39/116 (33.62%), Postives = 59/116 (50.86%), Query Frame = 1
Query:  223 KHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED--------GRV*MLQQHILQTCCQQNQLMLKLVSEASAWVLQWHFTQQH 546
            +  A +++LHGLGD G SW+  L ++ LP +K+ICP AP  PV +       +WFD+  LS D PED          +  L +H ++     N+++L   S+  A  L    T  H
Sbjct:   22 RETAAVIFLHGLGDTGHSWADALSTIRLPHVKYICPHAPRIPVTLNMKMVMPSWFDLMGLSPDAPEDEAGIKKAAENIKALIEHEMKNGIPANRIVLGGFSQGGALSLYTALTCPH 137          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA1_RAT (Acyl-protein thioesterase 1 OS=Rattus norvegicus GN=Lypla1 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.848e-11
Identity = 29/73 (39.73%), Postives = 39/73 (53.42%), Query Frame = 1
Query:  205 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 423
            VV    K  A +++LHGLGD G  W++    +    IK+ICP AP  PV +       +WFD+  LS D  ED
Sbjct:   13 VVPAARKATAAVIFLHGLGDTGHGWAEAFAGIKSSHIKYICPHAPVMPVTLNMSMMMPSWFDIIGLSPDSQED 85          

HSP 2 Score: 28.1054 bits (61), Expect = 1.848e-11
Identity = 16/47 (34.04%), Postives = 23/47 (48.94%), Query Frame = 3
Query:  489 KVGIGGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 629
            ++ +GGFS G A++LY+A           +     L  V  LS WLP
Sbjct:  112 RIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLP 147          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: LYPA1_BOVIN (Acyl-protein thioesterase 1 OS=Bos taurus GN=LYPLA1 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.400e-11
Identity = 28/73 (38.36%), Postives = 39/73 (53.42%), Query Frame = 1
Query:  205 VVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELSDDGPED 423
            +V    K  A +++LHGLGD G  W++    +    IK+ICP AP  PV +       +WFD+  LS D  ED
Sbjct:   13 IVPAARKATAAVIFLHGLGDTGHGWAEAFAGIRSAHIKYICPHAPVMPVTLNMNMAMPSWFDIIGLSPDSLED 85          

HSP 2 Score: 28.8758 bits (63), Expect = 2.400e-11
Identity = 24/74 (32.43%), Postives = 33/74 (44.59%), Query Frame = 3
Query:  429 GLDASAAHIANLLSTEPADVKVGI-------GGFSMGAAVALYSATCCALGRYGNGIPYYVNLRAVVGLSGWLP 629
            G+  +A ++  L+  E   VK GI       GGFS G A++LY+A           +     L  V  LS WLP
Sbjct:   88 GIKQAAENVKALIDQE---VKNGIPSNRIILGGFSQGGALSLYTA-----------LTTQQKLAGVTALSCWLP 147          
BLAST of CK933086 vs. ExPASy Swiss-Prot
Match: APTH1_CRYNE (Acyl-protein thioesterase 1 OS=Cryptococcus neoformans GN=CNF02430 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11
Identity = 33/83 (39.76%), Postives = 48/83 (57.83%), Query Frame = 1
Query:  208 VRPKGKHQATIVWLHGLGDNGSSWSQLLESL--PLPSIKWICPTAPTRPVAILGGFPCTAWFDVGELS--DDGPEDGRV*MLQ 444
            + PK  H AT+++LHGLGD+G  W  + + L    P++KWI P APT PV++  G    +WFD+  L   D+   D    ML+
Sbjct:   10 ISPKEAHTATVIFLHGLGDSGHGWLPVAKMLWSSFPNVKWILPHAPTIPVSLNHGMAMPSWFDIRHLDKLDNSENDDEQGMLE 92          
The following BLAST results are available for this feature:
BLAST of CK933086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
LYPA1_RABIT1.356e-1241.10Acyl-protein thioesterase 1 OS=Oryctolagus cunicul... [more]
LYPA1_MOUSE1.356e-1241.10Acyl-protein thioesterase 1 OS=Mus musculus GN=Lyp... [more]
LYPA1_PONAB2.286e-1239.73Acyl-protein thioesterase 1 OS=Pongo abelii GN=LYP... [more]
LYPA1_HUMAN2.969e-1239.73Acyl-protein thioesterase 1 OS=Homo sapiens GN=LYP... [more]
LYPA2_RAT8.850e-1233.62Acyl-protein thioesterase 2 OS=Rattus norvegicus G... [more]
LYPA2_MOUSE8.850e-1233.62Acyl-protein thioesterase 2 OS=Mus musculus GN=Lyp... [more]
LYPA2_HUMAN8.850e-1233.62Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYP... [more]
LYPA1_RAT1.848e-1139.73Acyl-protein thioesterase 1 OS=Rattus norvegicus G... [more]
LYPA1_BOVIN2.400e-1138.36Acyl-protein thioesterase 1 OS=Bos taurus GN=LYPLA... [more]
APTH1_CRYNE5.737e-1139.76Acyl-protein thioesterase 1 OS=Cryptococcus neofor... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_G09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933086 ID=CK933086; Name=CK933086; organism=Citrus sinensis; type=EST; length=654bp
GCGGGGAGGANNNAAGTTGGTTTAGCTTTCNNNTGCTTCCCTTGCACNNN
NNTTATCATTTTCCAGTAGCTCCTCTTCTCAGTCTTTGCCATAAGTGGAG
TTTTTAGTGCAGTTTGTAGCAAAGATAAAATGAGCTATTCCCACCAAACC
GTGGGCTCTGGTAGCAGAGCCGCTAGAAGGACATTTGAGTTTGGAAGGAC
TCATGTGGTGAGGCCCAAAGGGAAACATCAGGCTACTATAGTTTGGTTGC
ATGGCCTGGGGGATAATGGCTCGAGCTGGTCCCAGTTATTGGAAAGCCTT
CCTCTGCCAAGTATAAAATGGATTTGTCCAACTGCTCCTACTCGTCCAGT
GGCAATACTTGGGGGATTTCCATGCACTGCATGGTTTGATGTGGGAGAGC
TTTCAGATGATGGTCCGGAAGATGGGAGGGTTTAGATGCTTCAGCAGCAC
ATATTGCAAACTTGTTGTCAACAGAACCAGCTGATGTTAAAGTTGGTATC
GGAGGCTTCAGCATGGGTGCTGCAGTGGCACTTTACTCAGCAACATGTTG
TGCTCTGGGTAGGTATGGAAATGGGATTCCATACTATGTCAACTTAAGGG
CGGTTGTAGGATTAAGTGGCTGGCTTCCAGGTTCAAGAAACTTGAGGAAC
AAAA
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