CK933090
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_MEDSA (60S ribosomal protein L11 OS=Medicago sativa GN=RPL11 PE=2 SV=1) HSP 1 Score: 313.538 bits (802), Expect = 8.779e-85 Identity = 161/180 (89.44%), Postives = 162/180 (90.00%), Query Frame = 2 Query: 80 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 619 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLE IQHRVTK+DAMKWFQVKYEGVILNKSQ I Sbjct: 1 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLERPGYRVGRRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQAI 180
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL112_ARATH (60S ribosomal protein L11-2 OS=Arabidopsis thaliana GN=RPL11B PE=2 SV=2) HSP 1 Score: 311.612 bits (797), Expect = 3.336e-84 Identity = 158/180 (87.78%), Postives = 163/180 (90.56%), Query Frame = 2 Query: 80 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 619 MASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLE IQHRVTK+DAMKWFQVKYEGVILNKSQNI Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL111_ARATH (60S ribosomal protein L11-1 OS=Arabidopsis thaliana GN=RPL11A PE=1 SV=2) HSP 1 Score: 311.612 bits (797), Expect = 3.336e-84 Identity = 158/180 (87.78%), Postives = 163/180 (90.56%), Query Frame = 2 Query: 80 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQNI 619 MASEKKLSNPMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLE IQHRVTK+DAMKWFQVKYEGVILNKSQNI Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERPGYRVARRRRCKARVGIQHRVTKDDAMKWFQVKYEGVILNKSQNI 180
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_ORYSJ (60S ribosomal protein L11 OS=Oryza sativa subsp. japonica GN=RPL11 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 9.085e-82 Identity = 154/178 (86.52%), Postives = 160/178 (89.89%), Query Frame = 2 Query: 80 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQ 613 MASEKK SNPMREIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLE IQHRVTKEDAMKWFQVKYEGVILNK+Q Sbjct: 1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_ORYSI (60S ribosomal protein L11 OS=Oryza sativa subsp. indica GN=RPL11 PE=2 SV=2) HSP 1 Score: 303.523 bits (776), Expect = 9.085e-82 Identity = 154/178 (86.52%), Postives = 160/178 (89.89%), Query Frame = 2 Query: 80 MASEKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNKSQ 613 MASEKK SNPMREIKVQKLVLNISVGESGDRLTRA+KVLEQLSGQ+PVFSKARYTVRSFGIRRNEKIACYVTVRG+KAMQLLESGLKVKEYELLRRNFS+TGCFGFGIQEHIDLGIKYDPSTGIYGMDF+VVLE IQHRVTKEDAMKWFQVKYEGVILNK+Q Sbjct: 1 MASEKKQSNPMREIKVQKLVLNISVGESGDRLTRASKVLEQLSGQSPVFSKARYTVRSFGIRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSETGCFGFGIQEHIDLGIKYDPSTGIYGMDFYVVLERAGYRVARRRRCKSRVGIQHRVTKEDAMKWFQVKYEGVILNKAQ 178
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_DROME (60S ribosomal protein L11 OS=Drosophila melanogaster GN=RpL11 PE=1 SV=2) HSP 1 Score: 237.654 bits (605), Expect = 6.122e-62 Identity = 119/167 (71.26%), Postives = 133/167 (79.64%), Query Frame = 2 Query: 104 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILN 604 NPMR++ ++KL LNI VGESGDRLTRAAKVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL QHR+TKEDAMKWFQ KY+G+ILN Sbjct: 15 NPMRDLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILERGLKVREYELRRENFSSTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGYNVNHRKRKSGTVGFQHRLTKEDAMKWFQQKYDGIILN 181
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_SCHPO (60S ribosomal protein L11 OS=Schizosaccharomyces pombe GN=rpl11a PE=1 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.044e-61 Identity = 115/172 (66.86%), Postives = 135/172 (78.49%), Query Frame = 2 Query: 92 KKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVILNK 607 +K NPM+E+++ KLVLNIS+GESGDRLTRAAKVLEQLSGQTPVFSKARYT+R FGIRRNEKIAC+VTVRG KA ++LE GLKVKEYEL +RNFS TG FGFGIQEHIDLGIKYDPS GIYGMDF+VV++ H++ ED + WF+ KY+ V+L K Sbjct: 3 EKAQNPMKELRISKLVLNISLGESGDRLTRAAKVLEQLSGQTPVFSKARYTIRRFGIRRNEKIACHVTVRGPKAEEILERGLKVKEYELKKRNFSATGNFGFGIQEHIDLGIKYDPSIGIYGMDFYVVMDRPGMRVARRKAQRGRVGYTHKINAEDTINWFKQKYDAVVLGK 174
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_CAEEL (60S ribosomal protein L11 OS=Caenorhabditis elegans GN=rpl-11.1 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 1.044e-61 Identity = 119/171 (69.59%), Postives = 133/171 (77.78%), Query Frame = 2 Query: 89 EKKLSNPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 EKK N MRE+K+QKL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVR+FGIRRNEKIA + TVRG KA ++LE GLKVKEYEL + NFSDTG FGFG+QEHIDLGIKYDP GIYGMDF+VVL HRV KE+ +KWFQ KY+G+IL Sbjct: 12 EKKGRNVMRELKIQKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRTFGIRRNEKIAVHCTVRGPKAEEILEKGLKVKEYELFKENFSDTGNFGFGVQEHIDLGIKYDPGIGIYGMDFYVVLNRNGVRVSKRRRAPGRIGPSHRVDKEETIKWFQQKYDGIIL 182
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_RAT (60S ribosomal protein L11 OS=Rattus norvegicus GN=Rpl11 PE=1 SV=2) HSP 1 Score: 236.113 bits (601), Expect = 1.781e-61 Identity = 116/166 (69.88%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 104 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
BLAST of CK933090 vs. ExPASy Swiss-Prot
Match: RL11_PONAB (60S ribosomal protein L11 OS=Pongo abelii GN=RPL11 PE=2 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 1.781e-61 Identity = 116/166 (69.88%), Postives = 135/166 (81.33%), Query Frame = 2 Query: 104 NPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACYVTVRGDKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMDFFVVLEXXXXXXXXXXXXXXXXXIQHRVTKEDAMKWFQVKYEGVIL 601 NPMRE++++KL LNI VGESGDRLTRAAKVLEQL+GQTPVFSKARYTVRSFGIRRNEKIA + TVRG KA ++LE GLKV+EYEL + NFSDTG FGFGIQEHIDLGIKYDPS GIYG+DF+VVL +HR++KE+AM+WFQ KY+G+IL Sbjct: 10 NPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSITDKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175 The following BLAST results are available for this feature:
BLAST of CK933090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933090 ID=CK933090; Name=CK933090; organism=Citrus sinensis; type=EST; length=819bpback to top |