CK933096

Overview
NameCK933096
Unique NameCK933096
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length788
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1526 contig Csv1_Contig1526:1..788. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933096 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.448e-89
Identity = 157/202 (77.72%), Postives = 175/202 (86.63%), Query Frame = 3
Query:  180 EFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEFRLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAISFESE 785
            E  K  +GL+KVVLR +R   AE+YLYGG VTSWKND+GEELLF+SSKA FKPPKAIRGGIPIC PQF + G+LE HGFARNRFWSID DPP  P N + KA++DLILRP+EEDLKIWPHSFEFRLRVAL P GDL L SR+RNT+TDG+PFS+TFAYHTYF VSDISEVRVEGLET+DYLDNL+ KERFTEQGDAI FESE
Sbjct:   25 ELVKTPSGLEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYFFVSDISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESE 226          
BLAST of CK933096 vs. ExPASy Swiss-Prot
Match: YEAD_ECOLI (Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 6.635e-18
Identity = 67/191 (35.08%), Postives = 94/191 (49.21%), Query Frame = 3
Query:  144 FKIMSTEKFLPVEFCKGNNGLDKVVLRESRGSSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQF--ASLGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRPSEEDLKIWPHSFEF--RLRVALTPGGDLMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGL 704
            F +   E+  PV   +  + LD +V+   +   A   L G H+ SWK    EE+L++S+   FK   AIRGG+P+C+P F  A+   L +HGFARN  W++ +         +    +   L  SEE  K WPH F      RV  T   DL          + G+ F  T A HTYF+V DI++V V GL
Sbjct:    6 FALPVIEQISPVLSRRKLDELDLIVVDHPQ-VKASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSH-----HEDADGVALTFELTQSEETKKFWPHDFTLLAHFRVGKTCEIDL---------ESHGE-FETTSALHTYFNVGDIAKVSVSGL 180          
BLAST of CK933096 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.408e-14
Identity = 61/193 (31.61%), Postives = 84/193 (43.52%), Query Frame = 3
Query:  237 SSAEVYLYGGHVTSWKNDHGEELLFVSSKATFKPPKAIRGGIPICFPQFAS------LGSLESHGFARNRFWSIDTDPPAFPTNSSSKAYIDLILRP---SEEDLKIWPHSFEFRLRVALTPGGD-LMLISRVRNTSTDGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDAISFESE 785
            +S  +  YG  V SWK    EE L++S+ A     K +RGGIP+ FP F        L  L  HG ARN  W              +   +   L+P   + E  K+WP  +   L V L  G D L     V NTS+  K   F + +HTYF + DI    V  L  +   D L  KE + ++   ++F  E
Sbjct:   20 TSVHILKYGATVYSWKLK-SEEQLWLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEF------LGQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVEL--GSDYLKTAIEVENTSS-SKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLL-KESYVDKHPVVTFNQE 201          
The following BLAST results are available for this feature:
BLAST of CK933096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AAPC_CENCI1.448e-8977.72Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YEAD_ECOLI6.635e-1835.08Putative glucose-6-phosphate 1-epimerase OS=Escher... [more]
YMY9_YEAST3.408e-1431.61Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004347_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933096 ID=CK933096; Name=CK933096; organism=Citrus sinensis; type=EST; length=788bp
GGGAGAAAAGAACGAACTATCTCTCGCTCTACTGAAGTGAGCTAACACTA
AGTGAGAGAGATTTCATTTTCATATCAAATGCTGTGAATTTTCACATTAA
ACGAAGAGTAGAAAATCTTGGCGGCGGCGGTGGCGGCAGCGGCTTCAAAA
TCATGTCGACGGAGAAGTTTCTTCCAGTTGAGTTCTGCAAGGGCAATAAC
GGCCTCGACAAGGTCGTTCTCCGCGAGTCACGCGGCAGCTCCGCTGAGGT
GTATTTGTACGGGGGTCATGTGACGTCTTGGAAGAATGATCATGGAGAGG
AATTGCTTTTTGTCAGTAGTAAGGCTACATTCAAGCCTCCCAAAGCGATT
CGCGGAGGAATTCCAATCTGCTTTCCTCAGTTTGCAAGTCTTGGCTCTCT
GGAGTCGCATGGGTTTGCTAGAAATCGGTTTTGGAGTATTGACACTGACC
CGCCTGCTTTTCCAACTAATTCCTCAAGTAAGGCTTATATTGATTTGATA
CTAAGGCCCTCGGAAGAAGATCTGAAGATCTGGCCTCACAGTTTTGAGTT
CCGTCTCAGGGTAGCTTTGACTCCTGGTGGTGATCTGATGTTGATCTCTC
GCGTTAGGAATACTAGCACTGATGGAAAGCCATTTTCGTTCACATTTGCA
TATCATACCTATTTCTCTGTTTCAGACATCAGTGAAGTTCGCGTTGAGGG
ATTGGAGACACTGGATTACCTCGACAACTTGCAGAATAAGGAGCGTTTTA
CTGAACAAGGGGATGCAATATCATTTGAATCAGAAGNN
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